RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 ZNF787Q6DD87 383 aa5.63□□□□□ -1.51
PMS1-210ENST00000424307 ZNF467Q7Z7K2 595 aaPredicted RBP5.63□□□□□ -1.51
PMS1-210ENST00000424307 KCTD12Q96CX2 325 aaKnown RBP5.62□□□□□ -1.51
PMS1-210ENST00000424307 STAC3Q96MF2 364 aa5.6□□□□□ -1.51
PMS1-210ENST00000424307 ARHGAP33O14559 1287 aa5.59□□□□□ -1.51
PMS1-210ENST00000424307 PYGBP11216 843 aa5.59□□□□□ -1.51
PMS1-210ENST00000424307 AXIN2Q9Y2T1 843 aa5.58□□□□□ -1.52
PMS1-210ENST00000424307 PLCD3Q8N3E9 789 aa5.57□□□□□ -1.52
PMS1-210ENST00000424307 PSEN1P49768 467 aa5.55□□□□□ -1.52
PMS1-210ENST00000424307 GFRA3O60609 400 aa5.55□□□□□ -1.52
PMS1-210ENST00000424307 TMEM92Q6UXU6 159 aa5.54□□□□□ -1.52
PMS1-210ENST00000424307 PTPN5P54829 565 aa5.53□□□□□ -1.52
PMS1-210ENST00000424307 KHSRPQ92945 711 aaKnown RBP eCLIP5.52□□□□□ -1.538e-10■■□□□ 12.3
PMS1-210ENST00000424307 NRG2O14511 850 aaPredicted RBP5.52□□□□□ -1.53
PMS1-210ENST00000424307 STK17AQ9UEE5 414 aa5.52□□□□□ -1.53
PMS1-210ENST00000424307 PSDA5PKW4 1024 aaPredicted RBP5.51□□□□□ -1.53
PMS1-210ENST00000424307 CHRM1P11229 460 aaPredicted RBP5.5□□□□□ -1.53
PMS1-210ENST00000424307 LHX6Q9UPM6 363 aa5.49□□□□□ -1.53
PMS1-210ENST00000424307 ITGBL1O95965 494 aaPredicted RBP5.48□□□□□ -1.53
PMS1-210ENST00000424307 GSE1Q14687 1217 aa5.48□□□□□ -1.53
PMS1-210ENST00000424307 MICALL2Q8IY33 904 aa5.47□□□□□ -1.53
PMS1-210ENST00000424307 THSD4Q6ZMP0 1018 aa5.46□□□□□ -1.53
PMS1-210ENST00000424307 EHMT2Q96KQ7 1210 aa5.46□□□□□ -1.53
PMS1-210ENST00000424307 PDAP1Q13442 181 aaKnown RBP5.46□□□□□ -1.54
PMS1-210ENST00000424307 TREML4Q6UXN2 200 aa5.46□□□□□ -1.54
PMS1-210ENST00000424307 FBXO3Q9UK99 471 aa5.45□□□□□ -1.54
PMS1-210ENST00000424307 NUDT7P0C024 238 aa5.45□□□□□ -1.54
PMS1-210ENST00000424307 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
PMS1-210ENST00000424307 DMRTA1Q5VZB9 504 aa5.45□□□□□ -1.54
PMS1-210ENST00000424307 CABP2Q9NPB3 220 aa5.44□□□□□ -1.54
PMS1-210ENST00000424307 SUZ12Q15022 739 aaKnown RBP5.41□□□□□ -1.54
PMS1-210ENST00000424307 SLC34A2O95436 690 aa5.4□□□□□ -1.55
PMS1-210ENST00000424307 KCNH8Q96L42 1107 aa5.39□□□□□ -1.55
PMS1-210ENST00000424307 PSEN2P49810 448 aa5.38□□□□□ -1.55
PMS1-210ENST00000424307 SLC4A5Q9BY07 1137 aa5.38□□□□□ -1.55
PMS1-210ENST00000424307 VPS9D1Q9Y2B5 631 aa5.37□□□□□ -1.55
PMS1-210ENST00000424307 PCDHGA4Q9Y5G9 962 aa5.37□□□□□ -1.55
PMS1-210ENST00000424307 INSM1Q01101 510 aaPredicted RBP5.36□□□□□ -1.55
PMS1-210ENST00000424307 GOLGA8CPA6NN73 597 aa5.35□□□□□ -1.55
PMS1-210ENST00000424307 WNT2BQ93097 391 aa5.35□□□□□ -1.55
PMS1-210ENST00000424307 BHMG1C9JSJ3 638 aaPredicted RBP5.34□□□□□ -1.55
PMS1-210ENST00000424307 KCNC4Q03721 635 aa5.33□□□□□ -1.56
PMS1-210ENST00000424307 TRIM41Q8WV44 630 aa5.33□□□□□ -1.56
PMS1-210ENST00000424307 WIPF1O43516 503 aa5.32□□□□□ -1.56
PMS1-210ENST00000424307 NYAP1Q6ZVC0 841 aa5.32□□□□□ -1.56
PMS1-210ENST00000424307 V9GY48 417 aaPredicted RBP5.32□□□□□ -1.56
PMS1-210ENST00000424307 KDM4FA0A1W2PPD8 638 aa5.3□□□□□ -1.56
PMS1-210ENST00000424307 PPP4R3BQ5MIZ7 849 aa5.3□□□□□ -1.56
PMS1-210ENST00000424307 KLHL34Q8N239 644 aa5.29□□□□□ -1.56
PMS1-210ENST00000424307 SOX12O15370 315 aa5.28□□□□□ -1.56
PMS1-210ENST00000424307 EFCAB3Q8N7B9 438 aa5.28□□□□□ -1.56
PMS1-210ENST00000424307 KIF3CO14782 793 aa5.28□□□□□ -1.56
PMS1-210ENST00000424307 XP32Q5T750 250 aa5.28□□□□□ -1.56
PMS1-210ENST00000424307 PRKD2Q9BZL6 878 aa5.27□□□□□ -1.57
PMS1-210ENST00000424307 FAM181BA6NEQ2 426 aa5.26□□□□□ -1.57
PMS1-210ENST00000424307 MRPL50Q8N5N7 158 aaKnown RBP5.26□□□□□ -1.57
PMS1-210ENST00000424307 PDZRN3Q9UPQ7 1066 aa5.26□□□□□ -1.57
PMS1-210ENST00000424307 WFS1O76024 890 aa5.25□□□□□ -1.57
PMS1-210ENST00000424307 FKBP8Q14318 412 aa5.24□□□□□ -1.57
PMS1-210ENST00000424307 KCNK17Q96T54 332 aa5.24□□□□□ -1.57
PMS1-210ENST00000424307 VASPP50552 380 aaPredicted RBP5.23□□□□□ -1.57
PMS1-210ENST00000424307 SPOCK2Q92563 424 aa5.23□□□□□ -1.57
PMS1-210ENST00000424307 POTECB2RU33 542 aa5.22□□□□□ -1.57
PMS1-210ENST00000424307 MS4A4AQ96JQ5 239 aa5.22□□□□□ -1.57
PMS1-210ENST00000424307 DGAT1O75907 488 aa5.21□□□□□ -1.58
PMS1-210ENST00000424307 NBPF3Q9H094 633 aa5.21□□□□□ -1.58
PMS1-210ENST00000424307 MYT1Q01538 1121 aa5.2□□□□□ -1.58
PMS1-210ENST00000424307 C2orf72A6NCS6 295 aa5.19□□□□□ -1.58
PMS1-210ENST00000424307 ANKK1Q8NFD2 765 aa5.19□□□□□ -1.58
PMS1-210ENST00000424307 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
PMS1-210ENST00000424307 TAOK2Q9UL54 1235 aa5.18□□□□□ -1.58
PMS1-210ENST00000424307 PTCD2Q8WV60 388 aaKnown RBP5.18□□□□□ -1.58
PMS1-210ENST00000424307 ANO8Q9HCE9 1232 aaPredicted RBP5.16□□□□□ -1.58
PMS1-210ENST00000424307 ZBED2Q9BTP6 218 aa5.16□□□□□ -1.58
PMS1-210ENST00000424307 BCL2L12Q9HB09 334 aa5.15□□□□□ -1.58
PMS1-210ENST00000424307 SOWAHBA6NEL2 793 aa5.14□□□□□ -1.59
PMS1-210ENST00000424307 NFX1Q12986 1120 aaKnown RBP5.14□□□□□ -1.59
PMS1-210ENST00000424307 PKDCCQ504Y2 493 aa5.14□□□□□ -1.59
PMS1-210ENST00000424307 CIZ1Q9ULV3 898 aaPredicted RBP5.14□□□□□ -1.59
PMS1-210ENST00000424307 NLRP6P59044 892 aa5.12□□□□□ -1.59
PMS1-210ENST00000424307 VGFO15240 615 aaPredicted RBP5.11□□□□□ -1.59
PMS1-210ENST00000424307 TBC1D12O60347 775 aa5.11□□□□□ -1.59
PMS1-210ENST00000424307 LAPTM4BQ86VI4 370 aa5.11□□□□□ -1.59
PMS1-210ENST00000424307 PHF8Q9UPP1 1060 aa5.11□□□□□ -1.59
PMS1-210ENST00000424307 PTPREP23469 700 aa5.1□□□□□ -1.59
PMS1-210ENST00000424307 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.59
PMS1-210ENST00000424307 RIOK3O14730 519 aaKnown RBP5.09□□□□□ -1.59
PMS1-210ENST00000424307 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.09□□□□□ -1.59
PMS1-210ENST00000424307 WBP1LQ9NX94 342 aa5.09□□□□□ -1.59
PMS1-210ENST00000424307 PPP1R18Q6NYC8 613 aa5.08□□□□□ -1.6
PMS1-210ENST00000424307 BCAMP50895 628 aa5.08□□□□□ -1.6
PMS1-210ENST00000424307 TMC2Q8TDI7 906 aa5.08□□□□□ -1.6
PMS1-210ENST00000424307 KRTAP9-2Q9BYQ4 174 aa5.08□□□□□ -1.6
PMS1-210ENST00000424307 RABGEF1Q9UJ41 708 aa5.06□□□□□ -1.6
PMS1-210ENST00000424307 PRR20EP86478 221 aa5.06□□□□□ -1.6
PMS1-210ENST00000424307 PRR20CP86479 221 aa5.06□□□□□ -1.6
PMS1-210ENST00000424307 PRR20DP86480 221 aa5.06□□□□□ -1.6
PMS1-210ENST00000424307 PRR20BP86481 221 aa5.06□□□□□ -1.6
PMS1-210ENST00000424307 PRR20AP86496 221 aa5.06□□□□□ -1.6
PMS1-210ENST00000424307 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms