RNA–Protein interactions for RNA: ENST00000423566.6

AP3S2-202, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 1,262 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-202ENST00000423566 RSPH4AQ5TD94 716 aa16.86■□□□□ 0.29
AP3S2-202ENST00000423566 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
AP3S2-202ENST00000423566 ADGRL2O95490 1459 aa16.82■□□□□ 0.28
AP3S2-202ENST00000423566 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
AP3S2-202ENST00000423566 SHANK2Q9UPX8 1470 aa16.81■□□□□ 0.28
AP3S2-202ENST00000423566 DIEXFQ68CQ4 756 aaKnown RBP16.81■□□□□ 0.28
AP3S2-202ENST00000423566 KDM5BQ9UGL1 1544 aa16.78■□□□□ 0.28
AP3S2-202ENST00000423566 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
AP3S2-202ENST00000423566 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
AP3S2-202ENST00000423566 NCOA1Q15788 1441 aa16.77■□□□□ 0.27
AP3S2-202ENST00000423566 PLEKHH2Q8IVE3 1493 aa16.76■□□□□ 0.27
AP3S2-202ENST00000423566 ARHGEF5Q12774 1597 aa16.76■□□□□ 0.27
AP3S2-202ENST00000423566 ZNF644Q9H582 1327 aaPredicted RBP16.75■□□□□ 0.27
AP3S2-202ENST00000423566 CHIC2Q9UKJ5 165 aa16.75■□□□□ 0.27
AP3S2-202ENST00000423566 KIAA1107Q9UPP5 1409 aa16.74■□□□□ 0.27
AP3S2-202ENST00000423566 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
AP3S2-202ENST00000423566 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
AP3S2-202ENST00000423566 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
AP3S2-202ENST00000423566 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
AP3S2-202ENST00000423566 CDC42BPAQ5VT25 1732 aa16.71■□□□□ 0.27
AP3S2-202ENST00000423566 PPP1R15AO75807 674 aaPredicted RBP16.71■□□□□ 0.27
AP3S2-202ENST00000423566 ADGBQ8N7X0 1667 aa16.7■□□□□ 0.26
AP3S2-202ENST00000423566 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
AP3S2-202ENST00000423566 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
AP3S2-202ENST00000423566 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
AP3S2-202ENST00000423566 TRIM52Q96A61 297 aa16.69■□□□□ 0.26
AP3S2-202ENST00000423566 ARAP3Q8WWN8 1544 aa16.69■□□□□ 0.26
AP3S2-202ENST00000423566 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
AP3S2-202ENST00000423566 MBD5Q9P267 1494 aa16.68■□□□□ 0.26
AP3S2-202ENST00000423566 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
AP3S2-202ENST00000423566 C9orf84Q5VXU9 1444 aa16.68■□□□□ 0.26
AP3S2-202ENST00000423566 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
AP3S2-202ENST00000423566 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
AP3S2-202ENST00000423566 PLCH2O75038 1416 aa16.67■□□□□ 0.26
AP3S2-202ENST00000423566 NEUROD1Q13562 356 aa16.66■□□□□ 0.26
AP3S2-202ENST00000423566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
AP3S2-202ENST00000423566 ANKRD50Q9ULJ7 1429 aa16.65■□□□□ 0.26
AP3S2-202ENST00000423566 EFCAB2Q5VUJ9 269 aa16.64■□□□□ 0.25
AP3S2-202ENST00000423566 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
AP3S2-202ENST00000423566 ZCCHC11Q5TAX3 1644 aaKnown RBP16.63■□□□□ 0.25
AP3S2-202ENST00000423566 ANKRD30BQ9BXX2 1392 aa16.63■□□□□ 0.25
AP3S2-202ENST00000423566 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
AP3S2-202ENST00000423566 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
AP3S2-202ENST00000423566 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
AP3S2-202ENST00000423566 KDM6BO15054 1643 aa16.6■□□□□ 0.25
AP3S2-202ENST00000423566 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
AP3S2-202ENST00000423566 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
AP3S2-202ENST00000423566 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
AP3S2-202ENST00000423566 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
AP3S2-202ENST00000423566 TTC37Q6PGP7 1564 aa16.59■□□□□ 0.25
AP3S2-202ENST00000423566 CDC42BPBQ9Y5S2 1711 aa16.59■□□□□ 0.25
AP3S2-202ENST00000423566 MYO5CQ9NQX4 1742 aa16.58■□□□□ 0.24
AP3S2-202ENST00000423566 PZPP20742 1482 aa16.57■□□□□ 0.24
AP3S2-202ENST00000423566 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
AP3S2-202ENST00000423566 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.24
AP3S2-202ENST00000423566 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
AP3S2-202ENST00000423566 PLXNC1O60486 1568 aa16.53■□□□□ 0.24
AP3S2-202ENST00000423566 NPM1P06748 294 aaKnown RBP eCLIP16.53■□□□□ 0.24
AP3S2-202ENST00000423566 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
AP3S2-202ENST00000423566 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.24
AP3S2-202ENST00000423566 NUP155O75694 1391 aa16.51■□□□□ 0.23
AP3S2-202ENST00000423566 ABCC1P33527 1531 aa16.5■□□□□ 0.23
AP3S2-202ENST00000423566 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
AP3S2-202ENST00000423566 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
AP3S2-202ENST00000423566 ABCA9Q8IUA7 1624 aa16.48■□□□□ 0.23
AP3S2-202ENST00000423566 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
AP3S2-202ENST00000423566 PKD2Q13563 968 aa16.47■□□□□ 0.23
AP3S2-202ENST00000423566 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
AP3S2-202ENST00000423566 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
AP3S2-202ENST00000423566 L3MBTL2Q969R5 705 aa16.45■□□□□ 0.22
AP3S2-202ENST00000423566 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
AP3S2-202ENST00000423566 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
AP3S2-202ENST00000423566 MIER1Q8N108 512 aa16.43■□□□□ 0.22
AP3S2-202ENST00000423566 UNC13BO14795 1591 aa16.43■□□□□ 0.22
AP3S2-202ENST00000423566 FANCAO15360 1455 aa16.42■□□□□ 0.22
AP3S2-202ENST00000423566 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
AP3S2-202ENST00000423566 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
AP3S2-202ENST00000423566 FAM135AQ9P2D6 1515 aa16.4■□□□□ 0.22
AP3S2-202ENST00000423566 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
AP3S2-202ENST00000423566 EIF4G2P78344 907 aaKnown RBP eCLIP16.39■□□□□ 0.21
AP3S2-202ENST00000423566 FOXD1Q16676 465 aa16.39■□□□□ 0.21
AP3S2-202ENST00000423566 ATP10AO60312 1499 aa16.39■□□□□ 0.21
AP3S2-202ENST00000423566 UHRF1BP1Q6BDS2 1440 aa16.37■□□□□ 0.21
AP3S2-202ENST00000423566 CFAP74Q9C0B2 1584 aa16.37■□□□□ 0.21
AP3S2-202ENST00000423566 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
AP3S2-202ENST00000423566 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
AP3S2-202ENST00000423566 ZFYVE16Q7Z3T8 1539 aa16.35■□□□□ 0.21
AP3S2-202ENST00000423566 SCAPERQ9BY12 1400 aa16.34■□□□□ 0.21
AP3S2-202ENST00000423566 STAC3Q96MF2 364 aa16.33■□□□□ 0.2
AP3S2-202ENST00000423566 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
AP3S2-202ENST00000423566 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
AP3S2-202ENST00000423566 NEO1Q92859 1461 aa16.32■□□□□ 0.2
AP3S2-202ENST00000423566 INO80Q9ULG1 1556 aaPredicted RBP16.31■□□□□ 0.2
AP3S2-202ENST00000423566 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
AP3S2-202ENST00000423566 DHX29Q7Z478 1369 aaKnown RBP16.31■□□□□ 0.2
AP3S2-202ENST00000423566 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
AP3S2-202ENST00000423566 KANK1Q14678 1352 aa16.3■□□□□ 0.2
AP3S2-202ENST00000423566 ARID4BQ4LE39 1312 aaPredicted RBP16.3■□□□□ 0.2
AP3S2-202ENST00000423566 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
AP3S2-202ENST00000423566 HSPA5P11021 654 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 285.7 ms