RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 L3MBTL2Q969R5 705 aa20.12■□□□□ 0.81
SHISA9-201ENST00000423335 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
SHISA9-201ENST00000423335 NEFMP07197 916 aa20.11■□□□□ 0.81
SHISA9-201ENST00000423335 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
SHISA9-201ENST00000423335 HSPA5P11021 654 aaKnown RBP20.11■□□□□ 0.81
SHISA9-201ENST00000423335 PPP4R2Q9NY27 417 aa20.11■□□□□ 0.81
SHISA9-201ENST00000423335 CCER2I3L3R5 266 aa20.1■□□□□ 0.81
SHISA9-201ENST00000423335 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
SHISA9-201ENST00000423335 ANKRD30AQ9BXX3 1397 aa20.1■□□□□ 0.81
SHISA9-201ENST00000423335 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
SHISA9-201ENST00000423335 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
SHISA9-201ENST00000423335 AFAP1Q8N556 730 aa20.09■□□□□ 0.81
SHISA9-201ENST00000423335 FAM69CQ0P6D2 419 aa20.08■□□□□ 0.81
SHISA9-201ENST00000423335 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
SHISA9-201ENST00000423335 POGKQ9P215 609 aa20.07■□□□□ 0.8
SHISA9-201ENST00000423335 EIF5BO60841 1220 aaKnown RBP20.05■□□□□ 0.8
SHISA9-201ENST00000423335 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
SHISA9-201ENST00000423335 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
SHISA9-201ENST00000423335 DNMBPQ6XZF7 1577 aa20.04■□□□□ 0.8
SHISA9-201ENST00000423335 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
SHISA9-201ENST00000423335 WASHC2CQ9Y4E1 1318 aa20.04■□□□□ 0.8
SHISA9-201ENST00000423335 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
SHISA9-201ENST00000423335 PRDM2Q13029 1718 aa20.02■□□□□ 0.79
SHISA9-201ENST00000423335 KANK1Q14678 1352 aa20.01■□□□□ 0.79
SHISA9-201ENST00000423335 SOX12O15370 315 aa20.01■□□□□ 0.79
SHISA9-201ENST00000423335 LMOD2Q6P5Q4 547 aa20.01■□□□□ 0.79
SHISA9-201ENST00000423335 ARXQ96QS3 562 aa20■□□□□ 0.79
SHISA9-201ENST00000423335 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
SHISA9-201ENST00000423335 NEUROD2Q15784 382 aa19.98■□□□□ 0.79
SHISA9-201ENST00000423335 LAMC3Q9Y6N6 1575 aa19.97■□□□□ 0.79
SHISA9-201ENST00000423335 KNSTRNQ9Y448 316 aa19.97■□□□□ 0.79
SHISA9-201ENST00000423335 LAS1LQ9Y4W2 734 aaKnown RBP19.97■□□□□ 0.79
SHISA9-201ENST00000423335 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
SHISA9-201ENST00000423335 ABCA10Q8WWZ4 1543 aa19.94■□□□□ 0.78
SHISA9-201ENST00000423335 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
SHISA9-201ENST00000423335 RTN4Q9NQC3 1192 aaKnown RBP19.93■□□□□ 0.78
SHISA9-201ENST00000423335 FGD6Q6ZV73 1430 aa19.93■□□□□ 0.78
SHISA9-201ENST00000423335 A0A0G2JS52 829 aa19.93■□□□□ 0.78
SHISA9-201ENST00000423335 NOP58Q9Y2X3 529 aaKnown RBP19.92■□□□□ 0.78
SHISA9-201ENST00000423335 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
SHISA9-201ENST00000423335 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
SHISA9-201ENST00000423335 RSPH4AQ5TD94 716 aa19.91■□□□□ 0.78
SHISA9-201ENST00000423335 CASKIN1Q8WXD9 1431 aa19.91■□□□□ 0.78
SHISA9-201ENST00000423335 NCOA2Q15596 1464 aa19.89■□□□□ 0.77
SHISA9-201ENST00000423335 MYOM3Q5VTT5 1437 aa19.88■□□□□ 0.77
SHISA9-201ENST00000423335 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
SHISA9-201ENST00000423335 DEKP35659 375 aaKnown RBP19.85■□□□□ 0.77
SHISA9-201ENST00000423335 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
SHISA9-201ENST00000423335 TMF1P82094 1093 aa19.84■□□□□ 0.77
SHISA9-201ENST00000423335 PLB1Q6P1J6 1458 aa19.83■□□□□ 0.76
SHISA9-201ENST00000423335 ROCK2O75116 1388 aaKnown RBP19.82■□□□□ 0.76
SHISA9-201ENST00000423335 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
SHISA9-201ENST00000423335 KIF15Q9NS87 1388 aa19.82■□□□□ 0.76
SHISA9-201ENST00000423335 ST20-MTHFSA0A0A6YYL1 179 aa19.82■□□□□ 0.76
SHISA9-201ENST00000423335 RGS3P49796 1198 aa19.81■□□□□ 0.76
SHISA9-201ENST00000423335 CDCA8Q53HL2 280 aa19.81■□□□□ 0.76
SHISA9-201ENST00000423335 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.8■□□□□ 0.76
SHISA9-201ENST00000423335 KIAA0586Q9BVV6 1533 aa19.78■□□□□ 0.76
SHISA9-201ENST00000423335 U2SURPO15042 1029 aaKnown RBP19.77■□□□□ 0.76
SHISA9-201ENST00000423335 HAP1P54257 671 aaPredicted RBP19.75■□□□□ 0.75
SHISA9-201ENST00000423335 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
SHISA9-201ENST00000423335 SYNJ2O15056 1496 aa19.75■□□□□ 0.75
SHISA9-201ENST00000423335 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
SHISA9-201ENST00000423335 FYCO1Q9BQS8 1478 aa19.72■□□□□ 0.75
SHISA9-201ENST00000423335 CCDC144AA2RUR9 1427 aa19.72■□□□□ 0.75
SHISA9-201ENST00000423335 PRKRIP1Q9H875 184 aaPredicted RBP19.71■□□□□ 0.75
SHISA9-201ENST00000423335 ANKRD50Q9ULJ7 1429 aa19.71■□□□□ 0.75
SHISA9-201ENST00000423335 HSP90AA1P07900 732 aaKnown RBP19.71■□□□□ 0.75
SHISA9-201ENST00000423335 SCAPERQ9BY12 1400 aa19.7■□□□□ 0.74
SHISA9-201ENST00000423335 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
SHISA9-201ENST00000423335 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
SHISA9-201ENST00000423335 PAK3O75914 559 aaPredicted RBP19.67■□□□□ 0.74
SHISA9-201ENST00000423335 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
SHISA9-201ENST00000423335 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
SHISA9-201ENST00000423335 CFAP53Q96M91 514 aa19.66■□□□□ 0.74
SHISA9-201ENST00000423335 IQGAP2Q13576 1575 aa19.66■□□□□ 0.74
SHISA9-201ENST00000423335 MORC1Q86VD1 984 aa19.66■□□□□ 0.74
SHISA9-201ENST00000423335 EPRSP07814 1512 aaKnown RBP19.65■□□□□ 0.74
SHISA9-201ENST00000423335 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
SHISA9-201ENST00000423335 NUDCQ9Y266 331 aa19.63■□□□□ 0.73
SHISA9-201ENST00000423335 FRAT1Q92837 279 aaPredicted RBP19.63■□□□□ 0.73
SHISA9-201ENST00000423335 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
SHISA9-201ENST00000423335 UACAQ9BZF9 1416 aa19.63■□□□□ 0.73
SHISA9-201ENST00000423335 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
SHISA9-201ENST00000423335 ERICH6BQ5W0A0 696 aa19.62■□□□□ 0.73
SHISA9-201ENST00000423335 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
SHISA9-201ENST00000423335 TIAM1Q13009 1591 aa19.61■□□□□ 0.73
SHISA9-201ENST00000423335 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
SHISA9-201ENST00000423335 RRBP1Q9P2E9 1410 aaKnown RBP19.6■□□□□ 0.73
SHISA9-201ENST00000423335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.6■□□□□ 0.73
SHISA9-201ENST00000423335 BIVM-ERCC5R4GMW8 1640 aa19.6■□□□□ 0.73
SHISA9-201ENST00000423335 PCF11O94913 1555 aaKnown RBP19.59■□□□□ 0.73
SHISA9-201ENST00000423335 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
SHISA9-201ENST00000423335 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.72
SHISA9-201ENST00000423335 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
SHISA9-201ENST00000423335 EID1Q9Y6B2 187 aa19.58■□□□□ 0.72
SHISA9-201ENST00000423335 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
SHISA9-201ENST00000423335 PANK3Q9H999 370 aa19.56■□□□□ 0.72
SHISA9-201ENST00000423335 CFAP70Q5T0N1 1121 aa19.56■□□□□ 0.72
SHISA9-201ENST00000423335 PLIN1O60240 522 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms