RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.5□□□□□ -1.21
ITGB1-205ENST00000423113 RNF17Q9BXT8 1623 aaKnown RBP7.5□□□□□ -1.21
ITGB1-205ENST00000423113 NEO1Q92859 1461 aa7.49□□□□□ -1.21
ITGB1-205ENST00000423113 PTPRGP23470 1445 aa7.49□□□□□ -1.21
ITGB1-205ENST00000423113 MROH2AA6NES4 1674 aa7.49□□□□□ -1.21
ITGB1-205ENST00000423113 CDK13Q14004 1512 aaKnown RBP7.49□□□□□ -1.21
ITGB1-205ENST00000423113 ERICH6Q7L0X2 663 aa7.49□□□□□ -1.21
ITGB1-205ENST00000423113 SHANK2Q9UPX8 1470 aa7.49□□□□□ -1.21
ITGB1-205ENST00000423113 TROQ12816 1431 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-205ENST00000423113 ZC3H13Q5T200 1668 aaKnown RBP7.48□□□□□ -1.21
ITGB1-205ENST00000423113 KIDINS220Q9ULH0 1771 aa7.47□□□□□ -1.21
ITGB1-205ENST00000423113 PRKCSHP14314 528 aaPredicted RBP7.47□□□□□ -1.21
ITGB1-205ENST00000423113 SIGLEC1Q9BZZ2 1709 aa7.47□□□□□ -1.21
ITGB1-205ENST00000423113 PHLDB1Q86UU1 1377 aa7.47□□□□□ -1.21
ITGB1-205ENST00000423113 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
ITGB1-205ENST00000423113 PTPN23Q9H3S7 1636 aa7.46□□□□□ -1.22
ITGB1-205ENST00000423113 ARHGEF40Q8TER5 1519 aa7.46□□□□□ -1.22
ITGB1-205ENST00000423113 ASXL2Q76L83 1435 aa7.45□□□□□ -1.22
ITGB1-205ENST00000423113 KDM5AP29375 1690 aaKnown RBP7.45□□□□□ -1.22
ITGB1-205ENST00000423113 MIA2Q96PC5 1412 aa7.45□□□□□ -1.22
ITGB1-205ENST00000423113 ADGRL2O95490 1459 aa7.44□□□□□ -1.22
ITGB1-205ENST00000423113 UNC13BO14795 1591 aa7.44□□□□□ -1.22
ITGB1-205ENST00000423113 ZEB1P37275 1124 aaPredicted RBP7.44□□□□□ -1.22
ITGB1-205ENST00000423113 MAGI2Q86UL8 1455 aa7.44□□□□□ -1.22
ITGB1-205ENST00000423113 HECW2Q9P2P5 1572 aa7.44□□□□□ -1.22
ITGB1-205ENST00000423113 AKNAQ7Z591 1439 aa7.44□□□□□ -1.22
ITGB1-205ENST00000423113 VWDEQ8N2E2 1590 aa7.43□□□□□ -1.22
ITGB1-205ENST00000423113 KIAA1107Q9UPP5 1409 aa7.43□□□□□ -1.22
ITGB1-205ENST00000423113 RRBP1Q9P2E9 1410 aaKnown RBP7.43□□□□□ -1.22
ITGB1-205ENST00000423113 ZFYVE16Q7Z3T8 1539 aa7.43□□□□□ -1.22
ITGB1-205ENST00000423113 ABCA6Q8N139 1617 aa7.43□□□□□ -1.22
ITGB1-205ENST00000423113 TEX14Q8IWB6 1497 aa7.42□□□□□ -1.22
ITGB1-205ENST00000423113 KDM5DQ9BY66 1539 aa7.42□□□□□ -1.22
ITGB1-205ENST00000423113 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
ITGB1-205ENST00000423113 MROH1Q8NDA8 1641 aa7.41□□□□□ -1.22
ITGB1-205ENST00000423113 AGLP35573 1532 aa7.41□□□□□ -1.22
ITGB1-205ENST00000423113 PLCH2O75038 1416 aa7.41□□□□□ -1.22
ITGB1-205ENST00000423113 NEUROD1Q13562 356 aa7.41□□□□□ -1.22
ITGB1-205ENST00000423113 PLEKHH2Q8IVE3 1493 aa7.41□□□□□ -1.22
ITGB1-205ENST00000423113 DIP2CQ9Y2E4 1556 aa7.4□□□□□ -1.22
ITGB1-205ENST00000423113 NCOA2Q15596 1464 aa7.4□□□□□ -1.22
ITGB1-205ENST00000423113 MBD5Q9P267 1494 aa7.4□□□□□ -1.22
ITGB1-205ENST00000423113 NEURL4Q96JN8 1562 aa7.4□□□□□ -1.22
ITGB1-205ENST00000423113 ADAMTSL3P82987 1691 aa7.4□□□□□ -1.23
ITGB1-205ENST00000423113 FAM9AQ8IZU1 332 aaPredicted RBP7.4□□□□□ -1.23
ITGB1-205ENST00000423113 TSPOAP1O95153 1857 aa7.39□□□□□ -1.23
ITGB1-205ENST00000423113 MLH3Q9UHC1 1453 aa7.38□□□□□ -1.23
ITGB1-205ENST00000423113 YTHDC1Q96MU7 727 aaKnown RBP7.38□□□□□ -1.23
ITGB1-205ENST00000423113 IQGAP3Q86VI3 1631 aa7.38□□□□□ -1.23
ITGB1-205ENST00000423113 PRDM15P57071 1507 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-205ENST00000423113 RTEL1-TNFRSF6BF6WH68 1400 aa7.37□□□□□ -1.23
ITGB1-205ENST00000423113 ZNF142P52746 1687 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-205ENST00000423113 MYOM3Q5VTT5 1437 aa7.37□□□□□ -1.23
ITGB1-205ENST00000423113 ARHGEF12Q9NZN5 1544 aa7.37□□□□□ -1.23
ITGB1-205ENST00000423113 CAMSAP2Q08AD1 1489 aa7.36□□□□□ -1.23
ITGB1-205ENST00000423113 LMTK2Q8IWU2 1503 aa7.36□□□□□ -1.23
ITGB1-205ENST00000423113 POGZQ7Z3K3 1410 aa7.36□□□□□ -1.23
ITGB1-205ENST00000423113 KDM6BO15054 1643 aa7.36□□□□□ -1.23
ITGB1-205ENST00000423113 PIK3C2BO00750 1634 aa7.34□□□□□ -1.23
ITGB1-205ENST00000423113 IFT172Q9UG01 1749 aa7.34□□□□□ -1.23
ITGB1-205ENST00000423113 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
ITGB1-205ENST00000423113 ZNF518AQ6AHZ1 1483 aa7.33□□□□□ -1.24
ITGB1-205ENST00000423113 SYCP2Q9BX26 1530 aa7.33□□□□□ -1.24
ITGB1-205ENST00000423113 FGD6Q6ZV73 1430 aa7.33□□□□□ -1.24
ITGB1-205ENST00000423113 FBLN2P98095 1184 aa7.32□□□□□ -1.24
ITGB1-205ENST00000423113 TET3O43151 1660 aa7.32□□□□□ -1.24
ITGB1-205ENST00000423113 FANCAO15360 1455 aa7.32□□□□□ -1.24
ITGB1-205ENST00000423113 FER1L4A9Z1Z3 1794 aa7.31□□□□□ -1.24
ITGB1-205ENST00000423113 ROCK1Q13464 1354 aa7.31□□□□□ -1.24
ITGB1-205ENST00000423113 CCDC141Q6ZP82 1450 aa7.31□□□□□ -1.24
ITGB1-205ENST00000423113 CAMSAP1Q5T5Y3 1602 aa7.3□□□□□ -1.24
ITGB1-205ENST00000423113 TRIM26Q12899 539 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-205ENST00000423113 CEP152O94986 1710 aa7.3□□□□□ -1.24
ITGB1-205ENST00000423113 DUOX2Q9NRD8 1548 aa7.3□□□□□ -1.24
ITGB1-205ENST00000423113 ARHGAP5Q13017 1502 aa7.29□□□□□ -1.24
ITGB1-205ENST00000423113 ANP32EQ9BTT0 268 aa7.28□□□□□ -1.24
ITGB1-205ENST00000423113 CD109Q6YHK3 1445 aa7.28□□□□□ -1.24
ITGB1-205ENST00000423113 ERBINQ96RT1 1412 aa7.28□□□□□ -1.24
ITGB1-205ENST00000423113 C3P01024 1663 aa7.28□□□□□ -1.24
ITGB1-205ENST00000423113 SPHKAPQ2M3C7 1700 aa7.28□□□□□ -1.24
ITGB1-205ENST00000423113 COL17A1Q9UMD9 1497 aaPredicted RBP7.27□□□□□ -1.25
ITGB1-205ENST00000423113 DAPK1P53355 1430 aa7.26□□□□□ -1.25
ITGB1-205ENST00000423113 E9PCH4 1651 aa7.26□□□□□ -1.25
ITGB1-205ENST00000423113 PREX1Q8TCU6 1659 aa7.26□□□□□ -1.25
ITGB1-205ENST00000423113 ADGRL1O94910 1474 aa7.26□□□□□ -1.25
ITGB1-205ENST00000423113 ABCC5O15440 1437 aa7.25□□□□□ -1.25
ITGB1-205ENST00000423113 ATP10AO60312 1499 aa7.24□□□□□ -1.25
ITGB1-205ENST00000423113 DENND4BO75064 1496 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-205ENST00000423113 EFCAB6Q5THR3 1501 aa7.24□□□□□ -1.25
ITGB1-205ENST00000423113 SPATA31D1Q6ZQQ2 1576 aa7.24□□□□□ -1.25
ITGB1-205ENST00000423113 UBTFP17480 764 aaKnown RBP7.24□□□□□ -1.25
ITGB1-205ENST00000423113 SETD1AO15047 1707 aaKnown RBP7.24□□□□□ -1.25
ITGB1-205ENST00000423113 MADDQ8WXG6 1647 aa7.24□□□□□ -1.25
ITGB1-205ENST00000423113 LOC105371045A0A1W2PR82 267 aa7.23□□□□□ -1.25
ITGB1-205ENST00000423113 DIEXFQ68CQ4 756 aaKnown RBP7.23□□□□□ -1.25
ITGB1-205ENST00000423113 HFM1A2PYH4 1435 aa7.23□□□□□ -1.25
ITGB1-205ENST00000423113 CLTCQ00610 1675 aaKnown RBP7.22□□□□□ -1.25
ITGB1-205ENST00000423113 C9orf84Q5VXU9 1444 aa7.22□□□□□ -1.25
ITGB1-205ENST00000423113 POLR1AO95602 1720 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-205ENST00000423113 KIAA1210Q9ULL0 1709 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms