RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 PREX2Q70Z35 1606 aa23.55■■□□□ 1.36
FAM3A-209ENST00000421517 MTUS2Q5JR59 1369 aa23.54■■□□□ 1.36
FAM3A-209ENST00000421517 SCAPERQ9BY12 1400 aa23.54■■□□□ 1.36
FAM3A-209ENST00000421517 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
FAM3A-209ENST00000421517 MAP3K1Q13233 1512 aa23.54■■□□□ 1.36
FAM3A-209ENST00000421517 EHBP1L1Q8N3D4 1523 aa23.54■■□□□ 1.36
FAM3A-209ENST00000421517 POGZQ7Z3K3 1410 aa23.53■■□□□ 1.36
FAM3A-209ENST00000421517 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
FAM3A-209ENST00000421517 CDC42BPBQ9Y5S2 1711 aa23.51■■□□□ 1.35
FAM3A-209ENST00000421517 ZNF518AQ6AHZ1 1483 aa23.49■■□□□ 1.35
FAM3A-209ENST00000421517 GPATCH8Q9UKJ3 1502 aaKnown RBP23.49■■□□□ 1.35
FAM3A-209ENST00000421517 ARHGEF40Q8TER5 1519 aa23.47■■□□□ 1.35
FAM3A-209ENST00000421517 TIAM1Q13009 1591 aa23.47■■□□□ 1.35
FAM3A-209ENST00000421517 CDC42BPAQ5VT25 1732 aa23.47■■□□□ 1.35
FAM3A-209ENST00000421517 KDM5CP41229 1560 aa23.45■■□□□ 1.34
FAM3A-209ENST00000421517 CCNB3Q8WWL7 1395 aa23.44■■□□□ 1.34
FAM3A-209ENST00000421517 ABCC1P33527 1531 aa23.43■■□□□ 1.34
FAM3A-209ENST00000421517 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
FAM3A-209ENST00000421517 PLEKHH2Q8IVE3 1493 aa23.43■■□□□ 1.34
FAM3A-209ENST00000421517 ZFYVE16Q7Z3T8 1539 aa23.42■■□□□ 1.34
FAM3A-209ENST00000421517 MLH3Q9UHC1 1453 aa23.41■■□□□ 1.34
FAM3A-209ENST00000421517 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.34
FAM3A-209ENST00000421517 CFDP1Q9UEE9 299 aaPredicted RBP23.39■■□□□ 1.33
FAM3A-209ENST00000421517 SUPT6HQ7KZ85 1726 aaKnown RBP23.37■■□□□ 1.33
FAM3A-209ENST00000421517 ITSN2Q9NZM3 1697 aa23.37■■□□□ 1.33
FAM3A-209ENST00000421517 ARHGEF12Q9NZN5 1544 aa23.37■■□□□ 1.33
FAM3A-209ENST00000421517 ATP10AO60312 1499 aa23.36■■□□□ 1.33
FAM3A-209ENST00000421517 SAMD9LQ8IVG5 1584 aa23.35■■□□□ 1.33
FAM3A-209ENST00000421517 YEATS2Q9ULM3 1422 aa23.35■■□□□ 1.33
FAM3A-209ENST00000421517 AFAP1Q8N556 730 aa23.35■■□□□ 1.33
FAM3A-209ENST00000421517 NCOA2Q15596 1464 aa23.35■■□□□ 1.33
FAM3A-209ENST00000421517 HECW2Q9P2P5 1572 aa23.34■■□□□ 1.33
FAM3A-209ENST00000421517 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.33
FAM3A-209ENST00000421517 REREQ9P2R6 1566 aa23.33■■□□□ 1.33
FAM3A-209ENST00000421517 C9orf84Q5VXU9 1444 aa23.33■■□□□ 1.32
FAM3A-209ENST00000421517 ADAMTSL3P82987 1691 aa23.31■■□□□ 1.32
FAM3A-209ENST00000421517 BCORL1Q5H9F3 1711 aa23.3■■□□□ 1.32
FAM3A-209ENST00000421517 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
FAM3A-209ENST00000421517 APLP2Q06481 763 aa23.28■■□□□ 1.32
FAM3A-209ENST00000421517 SYCP2Q9BX26 1530 aa23.28■■□□□ 1.32
FAM3A-209ENST00000421517 ZNF777Q9ULD5 760 aaPredicted RBP23.27■■□□□ 1.32
FAM3A-209ENST00000421517 ARID4BQ4LE39 1312 aaPredicted RBP23.26■■□□□ 1.31
FAM3A-209ENST00000421517 MBD5Q9P267 1494 aa23.25■■□□□ 1.31
FAM3A-209ENST00000421517 DIP2CQ9Y2E4 1556 aa23.25■■□□□ 1.31
FAM3A-209ENST00000421517 MIA2Q96PC5 1412 aa23.25■■□□□ 1.31
FAM3A-209ENST00000421517 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
FAM3A-209ENST00000421517 AGLP35573 1532 aa23.23■■□□□ 1.31
FAM3A-209ENST00000421517 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
FAM3A-209ENST00000421517 RTEL1-TNFRSF6BF6WH68 1400 aa23.23■■□□□ 1.31
FAM3A-209ENST00000421517 KIDINS220Q9ULH0 1771 aa23.22■■□□□ 1.31
FAM3A-209ENST00000421517 SPAG9O60271 1321 aaKnown RBP23.21■■□□□ 1.31
FAM3A-209ENST00000421517 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
FAM3A-209ENST00000421517 PTPRMP28827 1452 aa23.19■■□□□ 1.3
FAM3A-209ENST00000421517 MYOM3Q5VTT5 1437 aa23.19■■□□□ 1.3
FAM3A-209ENST00000421517 SIGLEC1Q9BZZ2 1709 aa23.19■■□□□ 1.3
FAM3A-209ENST00000421517 INO80Q9ULG1 1556 aaPredicted RBP23.18■■□□□ 1.3
FAM3A-209ENST00000421517 ZNF644Q9H582 1327 aaPredicted RBP23.18■■□□□ 1.3
FAM3A-209ENST00000421517 ATP7AQ04656 1500 aa23.18■■□□□ 1.3
FAM3A-209ENST00000421517 CAMSAP2Q08AD1 1489 aa23.17■■□□□ 1.3
FAM3A-209ENST00000421517 MYT1LQ9UL68 1186 aa23.17■■□□□ 1.3
FAM3A-209ENST00000421517 ARHGEF5Q12774 1597 aa23.17■■□□□ 1.3
FAM3A-209ENST00000421517 CCDC141Q6ZP82 1450 aa23.16■■□□□ 1.3
FAM3A-209ENST00000421517 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
FAM3A-209ENST00000421517 PLXNC1O60486 1568 aa23.1■■□□□ 1.29
FAM3A-209ENST00000421517 A2MP01023 1474 aa23.09■■□□□ 1.29
FAM3A-209ENST00000421517 ADGBQ8N7X0 1667 aa23.07■■□□□ 1.28
FAM3A-209ENST00000421517 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
FAM3A-209ENST00000421517 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
FAM3A-209ENST00000421517 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
FAM3A-209ENST00000421517 MAST1Q9Y2H9 1570 aa23.06■■□□□ 1.28
FAM3A-209ENST00000421517 FER1L4A9Z1Z3 1794 aa23.05■■□□□ 1.28
FAM3A-209ENST00000421517 RIMS1Q86UR5 1692 aaKnown RBP23.05■■□□□ 1.28
FAM3A-209ENST00000421517 DHX29Q7Z478 1369 aaKnown RBP23.04■■□□□ 1.28
FAM3A-209ENST00000421517 CNTLNQ9NXG0 1405 aa23.04■■□□□ 1.28
FAM3A-209ENST00000421517 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
FAM3A-209ENST00000421517 MLECQ14165 292 aa23.03■■□□□ 1.28
FAM3A-209ENST00000421517 FGD6Q6ZV73 1430 aa23.02■■□□□ 1.28
FAM3A-209ENST00000421517 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
FAM3A-209ENST00000421517 PTPN23Q9H3S7 1636 aa22.98■■□□□ 1.27
FAM3A-209ENST00000421517 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
FAM3A-209ENST00000421517 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
FAM3A-209ENST00000421517 MROH2AA6NES4 1674 aa22.93■■□□□ 1.26
FAM3A-209ENST00000421517 ABCC5O15440 1437 aa22.92■■□□□ 1.26
FAM3A-209ENST00000421517 DNMT1P26358 1616 aaKnown RBP22.91■■□□□ 1.26
FAM3A-209ENST00000421517 LMTK3Q96Q04 1460 aa22.9■■□□□ 1.26
FAM3A-209ENST00000421517 DAPK1P53355 1430 aa22.9■■□□□ 1.26
FAM3A-209ENST00000421517 NPATQ14207 1427 aa22.89■■□□□ 1.25
FAM3A-209ENST00000421517 CROCC2H7BZ55 1655 aa22.88■■□□□ 1.25
FAM3A-209ENST00000421517 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
FAM3A-209ENST00000421517 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
FAM3A-209ENST00000421517 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
FAM3A-209ENST00000421517 C3P01024 1663 aa22.86■■□□□ 1.25
FAM3A-209ENST00000421517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
FAM3A-209ENST00000421517 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
FAM3A-209ENST00000421517 KIF3BO15066 747 aa22.85■■□□□ 1.25
FAM3A-209ENST00000421517 GGT6Q6P531 493 aa22.85■■□□□ 1.25
FAM3A-209ENST00000421517 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
FAM3A-209ENST00000421517 PREX1Q8TCU6 1659 aa22.83■■□□□ 1.24
FAM3A-209ENST00000421517 ADGRL2O95490 1459 aa22.82■■□□□ 1.24
FAM3A-209ENST00000421517 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms