RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
LINC00993-201ENST00000420453 RIMBP2O15034 1052 aa10.23□□□□□ -0.77
LINC00993-201ENST00000420453 HOXB3P14651 431 aaPredicted RBP10.23□□□□□ -0.77
LINC00993-201ENST00000420453 TMEM92Q6UXU6 159 aa10.2□□□□□ -0.78
LINC00993-201ENST00000420453 FAM205CA6NFA0 338 aa10.19□□□□□ -0.78
LINC00993-201ENST00000420453 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
LINC00993-201ENST00000420453 HS3ST6Q96QI5 342 aa10.16□□□□□ -0.78
LINC00993-201ENST00000420453 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
LINC00993-201ENST00000420453 HS6ST3Q8IZP7 471 aa10.13□□□□□ -0.79
LINC00993-201ENST00000420453 ERBB3P21860 1342 aa10.12□□□□□ -0.79
LINC00993-201ENST00000420453 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
LINC00993-201ENST00000420453 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
LINC00993-201ENST00000420453 POTEB3A0JP26 581 aa10.09□□□□□ -0.79
LINC00993-201ENST00000420453 POTEBQ6S5H4 581 aa10.09□□□□□ -0.79
LINC00993-201ENST00000420453 TMC2Q8TDI7 906 aa10.09□□□□□ -0.79
LINC00993-201ENST00000420453 C2orf72A6NCS6 295 aa10.07□□□□□ -0.8
LINC00993-201ENST00000420453 PPP1R37O75864 691 aa10.06□□□□□ -0.8
LINC00993-201ENST00000420453 GPR153Q6NV75 609 aa10.06□□□□□ -0.8
LINC00993-201ENST00000420453 KIF3CO14782 793 aa10.05□□□□□ -0.8
LINC00993-201ENST00000420453 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
LINC00993-201ENST00000420453 BBXQ8WY36 941 aaPredicted RBP10.05□□□□□ -0.8
LINC00993-201ENST00000420453 ARSIQ5FYB1 569 aa10.04□□□□□ -0.8
LINC00993-201ENST00000420453 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
LINC00993-201ENST00000420453 RYDENQ9NUL5 291 aaKnown RBP10.03□□□□□ -0.8
LINC00993-201ENST00000420453 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
LINC00993-201ENST00000420453 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
LINC00993-201ENST00000420453 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
LINC00993-201ENST00000420453 MMRN1Q13201 1228 aa10□□□□□ -0.81
LINC00993-201ENST00000420453 CFAP44Q96MT7 982 aa10□□□□□ -0.81
LINC00993-201ENST00000420453 HAP1P54257 671 aaPredicted RBP9.99□□□□□ -0.81
LINC00993-201ENST00000420453 DNAJC5Q9H3Z4 198 aa9.99□□□□□ -0.81
LINC00993-201ENST00000420453 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
LINC00993-201ENST00000420453 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
LINC00993-201ENST00000420453 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
LINC00993-201ENST00000420453 ZNF316A6NFI3 1004 aaPredicted RBP9.96□□□□□ -0.82
LINC00993-201ENST00000420453 SLC34A2O95436 690 aa9.96□□□□□ -0.82
LINC00993-201ENST00000420453 CCDC180Q9P1Z9 1646 aa9.95□□□□□ -0.82
LINC00993-201ENST00000420453 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.94□□□□□ -0.82
LINC00993-201ENST00000420453 PCDHGA4Q9Y5G9 962 aa9.94□□□□□ -0.82
LINC00993-201ENST00000420453 NUDT7P0C024 238 aa9.93□□□□□ -0.82
LINC00993-201ENST00000420453 GPHNQ9NQX3 736 aaPredicted RBP9.93□□□□□ -0.82
LINC00993-201ENST00000420453 FOXK1P85037 733 aa9.91□□□□□ -0.82
LINC00993-201ENST00000420453 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
LINC00993-201ENST00000420453 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
LINC00993-201ENST00000420453 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
LINC00993-201ENST00000420453 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
LINC00993-201ENST00000420453 TBC1D12O60347 775 aa9.88□□□□□ -0.83
LINC00993-201ENST00000420453 GTPBP6O43824 516 aaPredicted RBP9.87□□□□□ -0.83
LINC00993-201ENST00000420453 DSG2Q14126 1118 aa9.87□□□□□ -0.83
LINC00993-201ENST00000420453 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
LINC00993-201ENST00000420453 PTCD2Q8WV60 388 aaKnown RBP9.86□□□□□ -0.83
LINC00993-201ENST00000420453 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
LINC00993-201ENST00000420453 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
LINC00993-201ENST00000420453 PBX2P40425 430 aa9.83□□□□□ -0.84
LINC00993-201ENST00000420453 PDE4AP27815 886 aa9.82□□□□□ -0.84
LINC00993-201ENST00000420453 PTGER2P43116 358 aa9.82□□□□□ -0.84
LINC00993-201ENST00000420453 LSM11P83369 360 aaKnown RBP eCLIP9.8□□□□□ -0.84
LINC00993-201ENST00000420453 RNF166Q96A37 237 aaPredicted RBP9.8□□□□□ -0.84
LINC00993-201ENST00000420453 CRISPLD2Q9H0B8 497 aa9.8□□□□□ -0.84
LINC00993-201ENST00000420453 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
LINC00993-201ENST00000420453 PPP1R15BQ5SWA1 713 aa9.79□□□□□ -0.84
LINC00993-201ENST00000420453 KDM4FA0A1W2PPD8 638 aa9.77□□□□□ -0.85
LINC00993-201ENST00000420453 VSIG10Q8N0Z9 540 aa9.77□□□□□ -0.85
LINC00993-201ENST00000420453 PPP4R3BQ5MIZ7 849 aa9.76□□□□□ -0.85
LINC00993-201ENST00000420453 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC00993-201ENST00000420453 AXIN2Q9Y2T1 843 aa9.76□□□□□ -0.85
LINC00993-201ENST00000420453 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
LINC00993-201ENST00000420453 OXER1Q8TDS5 423 aa9.75□□□□□ -0.85
LINC00993-201ENST00000420453 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
LINC00993-201ENST00000420453 NCKAP5LQ9HCH0 1330 aa9.75□□□□□ -0.85
LINC00993-201ENST00000420453 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
LINC00993-201ENST00000420453 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
LINC00993-201ENST00000420453 KCNH8Q96L42 1107 aa9.72□□□□□ -0.85
LINC00993-201ENST00000420453 MFSD10Q14728 455 aa9.67□□□□□ -0.86
LINC00993-201ENST00000420453 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
LINC00993-201ENST00000420453 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
LINC00993-201ENST00000420453 PSEN2P49810 448 aa9.66□□□□□ -0.86
LINC00993-201ENST00000420453 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
LINC00993-201ENST00000420453 CADPS2Q86UW7 1296 aa9.66□□□□□ -0.86
LINC00993-201ENST00000420453 TK2O00142 265 aa9.65□□□□□ -0.86
LINC00993-201ENST00000420453 EVI5O60447 810 aa9.65□□□□□ -0.86
LINC00993-201ENST00000420453 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
LINC00993-201ENST00000420453 KCNK17Q96T54 332 aa9.64□□□□□ -0.87
LINC00993-201ENST00000420453 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
LINC00993-201ENST00000420453 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
LINC00993-201ENST00000420453 FOSBP53539 338 aa9.61□□□□□ -0.87
LINC00993-201ENST00000420453 JPH4Q96JJ6 628 aa9.6□□□□□ -0.87
LINC00993-201ENST00000420453 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
LINC00993-201ENST00000420453 PTPREP23469 700 aa9.59□□□□□ -0.87
LINC00993-201ENST00000420453 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
LINC00993-201ENST00000420453 HRO43593 1189 aa9.57□□□□□ -0.88
LINC00993-201ENST00000420453 ZDHHC16Q969W1 377 aa9.57□□□□□ -0.88
LINC00993-201ENST00000420453 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
LINC00993-201ENST00000420453 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
LINC00993-201ENST00000420453 VPS9D1Q9Y2B5 631 aa9.54□□□□□ -0.88
LINC00993-201ENST00000420453 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
LINC00993-201ENST00000420453 KCTD12Q96CX2 325 aaKnown RBP9.52□□□□□ -0.89
LINC00993-201ENST00000420453 ADAM33Q9BZ11 813 aa9.52□□□□□ -0.89
LINC00993-201ENST00000420453 FBXW7Q969H0 707 aa9.5□□□□□ -0.89
LINC00993-201ENST00000420453 ABCC9O60706 1549 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms