RNA–Protein interactions for RNA: ENST00000420451.5

HDLBP-207, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-207ENST00000420451 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
HDLBP-207ENST00000420451 LMTK3Q96Q04 1460 aa17.67■□□□□ 0.42
HDLBP-207ENST00000420451 SCAPERQ9BY12 1400 aa17.66■□□□□ 0.42
HDLBP-207ENST00000420451 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
HDLBP-207ENST00000420451 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.42
HDLBP-207ENST00000420451 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
HDLBP-207ENST00000420451 FER1L4A9Z1Z3 1794 aa17.63■□□□□ 0.41
HDLBP-207ENST00000420451 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
HDLBP-207ENST00000420451 KDM5CP41229 1560 aa17.62■□□□□ 0.41
HDLBP-207ENST00000420451 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
HDLBP-207ENST00000420451 ARHGEF12Q9NZN5 1544 aa17.59■□□□□ 0.41
HDLBP-207ENST00000420451 ATP10AO60312 1499 aa17.59■□□□□ 0.41
HDLBP-207ENST00000420451 EFCAB2Q5VUJ9 269 aa17.59■□□□□ 0.41
HDLBP-207ENST00000420451 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
HDLBP-207ENST00000420451 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
HDLBP-207ENST00000420451 ARHGAP5Q13017 1502 aa17.57■□□□□ 0.4
HDLBP-207ENST00000420451 ZNF518AQ6AHZ1 1483 aa17.57■□□□□ 0.4
HDLBP-207ENST00000420451 CLIP1P30622 1438 aa17.57■□□□□ 0.4
HDLBP-207ENST00000420451 C9orf84Q5VXU9 1444 aa17.57■□□□□ 0.4
HDLBP-207ENST00000420451 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
HDLBP-207ENST00000420451 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
HDLBP-207ENST00000420451 REREQ9P2R6 1566 aa17.55■□□□□ 0.4
HDLBP-207ENST00000420451 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
HDLBP-207ENST00000420451 CDC42BPAQ5VT25 1732 aa17.54■□□□□ 0.4
HDLBP-207ENST00000420451 ABCC1P33527 1531 aa17.53■□□□□ 0.4
HDLBP-207ENST00000420451 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.4
HDLBP-207ENST00000420451 ABCA6Q8N139 1617 aa17.52■□□□□ 0.4
HDLBP-207ENST00000420451 MLH3Q9UHC1 1453 aa17.51■□□□□ 0.39
HDLBP-207ENST00000420451 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
HDLBP-207ENST00000420451 AFAP1Q8N556 730 aa17.5■□□□□ 0.39
HDLBP-207ENST00000420451 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
HDLBP-207ENST00000420451 MLECQ14165 292 aa17.49■□□□□ 0.39
HDLBP-207ENST00000420451 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
HDLBP-207ENST00000420451 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
HDLBP-207ENST00000420451 AGLP35573 1532 aa17.47■□□□□ 0.39
HDLBP-207ENST00000420451 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
HDLBP-207ENST00000420451 HSPA2P54652 639 aa17.46■□□□□ 0.39
HDLBP-207ENST00000420451 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
HDLBP-207ENST00000420451 C3P01024 1663 aa17.43■□□□□ 0.38
HDLBP-207ENST00000420451 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
HDLBP-207ENST00000420451 GPATCH8Q9UKJ3 1502 aaKnown RBP17.41■□□□□ 0.38
HDLBP-207ENST00000420451 STRCQ7RTU9 1775 aa17.4■□□□□ 0.38
HDLBP-207ENST00000420451 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
HDLBP-207ENST00000420451 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
HDLBP-207ENST00000420451 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
HDLBP-207ENST00000420451 UHRF1BP1Q6BDS2 1440 aa17.35■□□□□ 0.37
HDLBP-207ENST00000420451 INO80Q9ULG1 1556 aaPredicted RBP17.35■□□□□ 0.37
HDLBP-207ENST00000420451 MROH2AA6NES4 1674 aa17.35■□□□□ 0.37
HDLBP-207ENST00000420451 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
HDLBP-207ENST00000420451 KIAA1107Q9UPP5 1409 aa17.34■□□□□ 0.37
HDLBP-207ENST00000420451 PLXNC1O60486 1568 aa17.33■□□□□ 0.37
HDLBP-207ENST00000420451 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
HDLBP-207ENST00000420451 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
HDLBP-207ENST00000420451 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
HDLBP-207ENST00000420451 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
HDLBP-207ENST00000420451 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
HDLBP-207ENST00000420451 CERKQ8TCT0 537 aa17.29■□□□□ 0.36
HDLBP-207ENST00000420451 EHBP1L1Q8N3D4 1523 aa17.28■□□□□ 0.36
HDLBP-207ENST00000420451 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.364e-7■■■■■ 30
HDLBP-207ENST00000420451 ZNF777Q9ULD5 760 aaPredicted RBP17.28■□□□□ 0.36
HDLBP-207ENST00000420451 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
HDLBP-207ENST00000420451 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.35
HDLBP-207ENST00000420451 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.35
HDLBP-207ENST00000420451 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
HDLBP-207ENST00000420451 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
HDLBP-207ENST00000420451 CLTCQ00610 1675 aaKnown RBP17.26■□□□□ 0.35
HDLBP-207ENST00000420451 A2MP01023 1474 aa17.25■□□□□ 0.35
HDLBP-207ENST00000420451 PTPRTO14522 1441 aa17.25■□□□□ 0.35
HDLBP-207ENST00000420451 NPATQ14207 1427 aa17.25■□□□□ 0.35
HDLBP-207ENST00000420451 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
HDLBP-207ENST00000420451 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
HDLBP-207ENST00000420451 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
HDLBP-207ENST00000420451 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
HDLBP-207ENST00000420451 ZMYM3Q14202 1370 aa17.22■□□□□ 0.35
HDLBP-207ENST00000420451 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-207ENST00000420451 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
HDLBP-207ENST00000420451 MYO3AQ8NEV4 1616 aa17.2■□□□□ 0.34
HDLBP-207ENST00000420451 ZNF644Q9H582 1327 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-207ENST00000420451 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
HDLBP-207ENST00000420451 RTEL1-TNFRSF6BF6WH68 1400 aa17.19■□□□□ 0.34
HDLBP-207ENST00000420451 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
HDLBP-207ENST00000420451 PTPRKQ15262 1439 aa17.17■□□□□ 0.34
HDLBP-207ENST00000420451 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
HDLBP-207ENST00000420451 CEP170BQ9Y4F5 1589 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-207ENST00000420451 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
HDLBP-207ENST00000420451 CAMSAP2Q08AD1 1489 aa17.13■□□□□ 0.33
HDLBP-207ENST00000420451 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
HDLBP-207ENST00000420451 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
HDLBP-207ENST00000420451 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
HDLBP-207ENST00000420451 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
HDLBP-207ENST00000420451 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
HDLBP-207ENST00000420451 GGT6Q6P531 493 aa17.11■□□□□ 0.33
HDLBP-207ENST00000420451 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
HDLBP-207ENST00000420451 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
HDLBP-207ENST00000420451 DNMT1P26358 1616 aaKnown RBP17.08■□□□□ 0.32
HDLBP-207ENST00000420451 KDM5DQ9BY66 1539 aa17.07■□□□□ 0.32
HDLBP-207ENST00000420451 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
HDLBP-207ENST00000420451 RSPH4AQ5TD94 716 aa17.07■□□□□ 0.32
HDLBP-207ENST00000420451 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
HDLBP-207ENST00000420451 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms