RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
SEMA3B-203ENST00000419007 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-203ENST00000419007 NBPF8Q3BBV2 869 aa20.85■□□□□ 0.93
SEMA3B-203ENST00000419007 EPRSP07814 1512 aaKnown RBP20.84■□□□□ 0.93
SEMA3B-203ENST00000419007 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
SEMA3B-203ENST00000419007 MSH5O43196 834 aa20.84■□□□□ 0.93
SEMA3B-203ENST00000419007 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
SEMA3B-203ENST00000419007 ZNF644Q9H582 1327 aaPredicted RBP20.83■□□□□ 0.93
SEMA3B-203ENST00000419007 ZNF326Q5BKZ1 582 aaKnown RBP20.83■□□□□ 0.93
SEMA3B-203ENST00000419007 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
SEMA3B-203ENST00000419007 TCOF1Q13428 1488 aaKnown RBP20.82■□□□□ 0.92
SEMA3B-203ENST00000419007 HECW1Q76N89 1606 aa20.81■□□□□ 0.92
SEMA3B-203ENST00000419007 B4GALNT3Q6L9W6 998 aa20.8■□□□□ 0.92
SEMA3B-203ENST00000419007 EIF4G3O43432 1585 aaKnown RBP20.8■□□□□ 0.92
SEMA3B-203ENST00000419007 PPP4R2Q9NY27 417 aa20.8■□□□□ 0.92
SEMA3B-203ENST00000419007 GCC2Q8IWJ2 1684 aa20.79■□□□□ 0.92
SEMA3B-203ENST00000419007 SENP3-EIF4A1A0A087X0R7 540 aa20.78■□□□□ 0.92
SEMA3B-203ENST00000419007 MIA2Q96PC5 1412 aa20.77■□□□□ 0.92
SEMA3B-203ENST00000419007 KIF7Q2M1P5 1343 aa20.77■□□□□ 0.91
SEMA3B-203ENST00000419007 NCOA1Q15788 1441 aa20.76■□□□□ 0.91
SEMA3B-203ENST00000419007 AKNAQ7Z591 1439 aa20.75■□□□□ 0.91
SEMA3B-203ENST00000419007 IQGAP2Q13576 1575 aa20.75■□□□□ 0.91
SEMA3B-203ENST00000419007 ANKRD30BQ9BXX2 1392 aa20.75■□□□□ 0.91
SEMA3B-203ENST00000419007 ZNF777Q9ULD5 760 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-203ENST00000419007 ZBED9Q6R2W3 1325 aa20.72■□□□□ 0.91
SEMA3B-203ENST00000419007 DAPK1P53355 1430 aa20.72■□□□□ 0.91
SEMA3B-203ENST00000419007 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
SEMA3B-203ENST00000419007 RPRD2Q5VT52 1461 aaKnown RBP20.7■□□□□ 0.9
SEMA3B-203ENST00000419007 FANCIQ9NVI1 1328 aa20.7■□□□□ 0.9
SEMA3B-203ENST00000419007 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.9
SEMA3B-203ENST00000419007 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
SEMA3B-203ENST00000419007 ABCC5O15440 1437 aa20.69■□□□□ 0.9
SEMA3B-203ENST00000419007 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
SEMA3B-203ENST00000419007 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
SEMA3B-203ENST00000419007 ROCK1Q13464 1354 aa20.65■□□□□ 0.9
SEMA3B-203ENST00000419007 TEX14Q8IWB6 1497 aa20.64■□□□□ 0.9
SEMA3B-203ENST00000419007 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
SEMA3B-203ENST00000419007 MAGI1Q96QZ7 1491 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-203ENST00000419007 PKD2Q13563 968 aa20.61■□□□□ 0.89
SEMA3B-203ENST00000419007 SYNJ2O15056 1496 aa20.61■□□□□ 0.89
SEMA3B-203ENST00000419007 SPATA31E1Q6ZUB1 1445 aa20.6■□□□□ 0.89
SEMA3B-203ENST00000419007 USP47Q96K76 1375 aa20.58■□□□□ 0.89
SEMA3B-203ENST00000419007 JPH4Q96JJ6 628 aa20.58■□□□□ 0.89
SEMA3B-203ENST00000419007 PRG4Q92954 1404 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-203ENST00000419007 DNMT1P26358 1616 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-203ENST00000419007 NUP153P49790 1475 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-203ENST00000419007 KDM2AQ9Y2K7 1162 aa20.56■□□□□ 0.88
SEMA3B-203ENST00000419007 TMC1Q8TDI8 760 aa20.55■□□□□ 0.88
SEMA3B-203ENST00000419007 CCDC136Q96JN2 1154 aa20.54■□□□□ 0.88
SEMA3B-203ENST00000419007 PZPP20742 1482 aa20.52■□□□□ 0.88
SEMA3B-203ENST00000419007 NUDCQ9Y266 331 aa20.52■□□□□ 0.88
SEMA3B-203ENST00000419007 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.87
SEMA3B-203ENST00000419007 DISP1Q96F81 1524 aa20.51■□□□□ 0.87
SEMA3B-203ENST00000419007 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
SEMA3B-203ENST00000419007 CAMSAP2Q08AD1 1489 aa20.5■□□□□ 0.87
SEMA3B-203ENST00000419007 KIAA0586Q9BVV6 1533 aa20.5■□□□□ 0.87
SEMA3B-203ENST00000419007 KIAA1107Q9UPP5 1409 aa20.49■□□□□ 0.87
SEMA3B-203ENST00000419007 KIAA0556O60303 1618 aa20.49■□□□□ 0.87
SEMA3B-203ENST00000419007 SALL2Q9Y467 1007 aaPredicted RBP20.48■□□□□ 0.87
SEMA3B-203ENST00000419007 SMG6Q86US8 1419 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-203ENST00000419007 RAPGEF6Q8TEU7 1601 aa20.47■□□□□ 0.87
SEMA3B-203ENST00000419007 TROQ12816 1431 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-203ENST00000419007 NUP155O75694 1391 aa20.46■□□□□ 0.87
SEMA3B-203ENST00000419007 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
SEMA3B-203ENST00000419007 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
SEMA3B-203ENST00000419007 PLB1Q6P1J6 1458 aa20.45■□□□□ 0.86
SEMA3B-203ENST00000419007 NBR1Q14596 966 aa20.44■□□□□ 0.86
SEMA3B-203ENST00000419007 PNISRQ8TF01 805 aaKnown RBP20.44■□□□□ 0.86
SEMA3B-203ENST00000419007 ST20-MTHFSA0A0A6YYL1 179 aa20.44■□□□□ 0.86
SEMA3B-203ENST00000419007 DCAF11Q8TEB1 546 aa20.43■□□□□ 0.86
SEMA3B-203ENST00000419007 ANKRD50Q9ULJ7 1429 aa20.43■□□□□ 0.86
SEMA3B-203ENST00000419007 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
SEMA3B-203ENST00000419007 BCORL1Q5H9F3 1711 aa20.43■□□□□ 0.86
SEMA3B-203ENST00000419007 NOP58Q9Y2X3 529 aaKnown RBP20.41■□□□□ 0.86
SEMA3B-203ENST00000419007 POLR1AO95602 1720 aaPredicted RBP20.4■□□□□ 0.86
SEMA3B-203ENST00000419007 PLEKHD1A6NEE1 506 aa20.4■□□□□ 0.86
SEMA3B-203ENST00000419007 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
SEMA3B-203ENST00000419007 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
SEMA3B-203ENST00000419007 NUP160Q12769 1436 aa20.39■□□□□ 0.85
SEMA3B-203ENST00000419007 PAK3O75914 559 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-203ENST00000419007 MBD5Q9P267 1494 aa20.38■□□□□ 0.85
SEMA3B-203ENST00000419007 KIF14Q15058 1648 aa20.37■□□□□ 0.85
SEMA3B-203ENST00000419007 PRKCSHP14314 528 aaPredicted RBP20.37■□□□□ 0.85
SEMA3B-203ENST00000419007 ANP32AP39687 249 aaKnown RBP20.37■□□□□ 0.85
SEMA3B-203ENST00000419007 ARID4BQ4LE39 1312 aaPredicted RBP20.36■□□□□ 0.85
SEMA3B-203ENST00000419007 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEMA3B-203ENST00000419007 ROCK2O75116 1388 aaKnown RBP20.35■□□□□ 0.85
SEMA3B-203ENST00000419007 KIF15Q9NS87 1388 aa20.35■□□□□ 0.85
SEMA3B-203ENST00000419007 CHD1O14646 1710 aa20.35■□□□□ 0.85
SEMA3B-203ENST00000419007 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
SEMA3B-203ENST00000419007 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
SEMA3B-203ENST00000419007 CARMIL2Q6F5E8 1435 aa20.33■□□□□ 0.85
SEMA3B-203ENST00000419007 KDM5CP41229 1560 aa20.33■□□□□ 0.85
SEMA3B-203ENST00000419007 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
SEMA3B-203ENST00000419007 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
SEMA3B-203ENST00000419007 DEKP35659 375 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-203ENST00000419007 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-203ENST00000419007 ADGBQ8N7X0 1667 aa20.31■□□□□ 0.84
SEMA3B-203ENST00000419007 C9orf84Q5VXU9 1444 aa20.31■□□□□ 0.84
SEMA3B-203ENST00000419007 ADGRL2O95490 1459 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms