RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 MRS2Q9HD23 443 aa17.09■□□□□ 0.33
SCAF8-203ENST00000417268 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
SCAF8-203ENST00000417268 PRG4Q92954 1404 aaPredicted RBP17.08■□□□□ 0.32
SCAF8-203ENST00000417268 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
SCAF8-203ENST00000417268 FOXD1Q16676 465 aa17.03■□□□□ 0.32
SCAF8-203ENST00000417268 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
SCAF8-203ENST00000417268 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
SCAF8-203ENST00000417268 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
SCAF8-203ENST00000417268 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
SCAF8-203ENST00000417268 SALL2Q9Y467 1007 aaPredicted RBP16.99■□□□□ 0.31
SCAF8-203ENST00000417268 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
SCAF8-203ENST00000417268 SYNJ2O15056 1496 aa16.98■□□□□ 0.31
SCAF8-203ENST00000417268 MYOM3Q5VTT5 1437 aa16.98■□□□□ 0.31
SCAF8-203ENST00000417268 TMF1P82094 1093 aa16.97■□□□□ 0.31
SCAF8-203ENST00000417268 URB2Q14146 1524 aaKnown RBP16.96■□□□□ 0.31
SCAF8-203ENST00000417268 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.31
SCAF8-203ENST00000417268 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
SCAF8-203ENST00000417268 CFAP53Q96M91 514 aa16.96■□□□□ 0.31
SCAF8-203ENST00000417268 ARAP1Q96P48 1450 aa16.95■□□□□ 0.3
SCAF8-203ENST00000417268 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
SCAF8-203ENST00000417268 LRRC9Q6ZRR7 1453 aa16.94■□□□□ 0.3
SCAF8-203ENST00000417268 FGD6Q6ZV73 1430 aa16.93■□□□□ 0.3
SCAF8-203ENST00000417268 ZBTB7CA1YPR0 619 aa16.92■□□□□ 0.3
SCAF8-203ENST00000417268 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
SCAF8-203ENST00000417268 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
SCAF8-203ENST00000417268 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
SCAF8-203ENST00000417268 ARXQ96QS3 562 aa16.9■□□□□ 0.3
SCAF8-203ENST00000417268 ANP32BQ92688 251 aaKnown RBP16.89■□□□□ 0.29
SCAF8-203ENST00000417268 RTN4Q9NQC3 1192 aaKnown RBP16.88■□□□□ 0.29
SCAF8-203ENST00000417268 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
SCAF8-203ENST00000417268 SRPK2P78362 688 aaKnown RBP16.88■□□□□ 0.29
SCAF8-203ENST00000417268 NCOA2Q15596 1464 aa16.88■□□□□ 0.29
SCAF8-203ENST00000417268 PHLDB1Q86UU1 1377 aa16.87■□□□□ 0.29
SCAF8-203ENST00000417268 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
SCAF8-203ENST00000417268 STK26Q9P289 416 aa16.87■□□□□ 0.29
SCAF8-203ENST00000417268 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
SCAF8-203ENST00000417268 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
SCAF8-203ENST00000417268 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
SCAF8-203ENST00000417268 PPM1GO15355 546 aaPredicted RBP16.86■□□□□ 0.29
SCAF8-203ENST00000417268 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
SCAF8-203ENST00000417268 UPF2Q9HAU5 1272 aaKnown RBP16.85■□□□□ 0.29
SCAF8-203ENST00000417268 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAF8-203ENST00000417268 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
SCAF8-203ENST00000417268 CUL7Q14999 1698 aa16.85■□□□□ 0.29
SCAF8-203ENST00000417268 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
SCAF8-203ENST00000417268 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
SCAF8-203ENST00000417268 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.29
SCAF8-203ENST00000417268 KIF15Q9NS87 1388 aa16.83■□□□□ 0.28
SCAF8-203ENST00000417268 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
SCAF8-203ENST00000417268 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
SCAF8-203ENST00000417268 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
SCAF8-203ENST00000417268 IQGAP2Q13576 1575 aa16.82■□□□□ 0.28
SCAF8-203ENST00000417268 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
SCAF8-203ENST00000417268 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
SCAF8-203ENST00000417268 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
SCAF8-203ENST00000417268 HSP90AA1P07900 732 aaKnown RBP16.8■□□□□ 0.28
SCAF8-203ENST00000417268 UACAQ9BZF9 1416 aa16.8■□□□□ 0.28
SCAF8-203ENST00000417268 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
SCAF8-203ENST00000417268 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
SCAF8-203ENST00000417268 DHX57Q6P158 1386 aaKnown RBP16.79■□□□□ 0.28
SCAF8-203ENST00000417268 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
SCAF8-203ENST00000417268 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
SCAF8-203ENST00000417268 PPP4R2Q9NY27 417 aa16.78■□□□□ 0.28
SCAF8-203ENST00000417268 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
SCAF8-203ENST00000417268 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
SCAF8-203ENST00000417268 TNNT2P45379 298 aaPredicted RBP16.76■□□□□ 0.27
SCAF8-203ENST00000417268 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
SCAF8-203ENST00000417268 A0A0G2JS52 829 aa16.75■□□□□ 0.27
SCAF8-203ENST00000417268 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
SCAF8-203ENST00000417268 ANKRD50Q9ULJ7 1429 aa16.75■□□□□ 0.27
SCAF8-203ENST00000417268 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
SCAF8-203ENST00000417268 DDRGK1Q96HY6 314 aa16.75■□□□□ 0.27
SCAF8-203ENST00000417268 MAPK8IP3Q9UPT6 1336 aa16.74■□□□□ 0.27
SCAF8-203ENST00000417268 LAS1LQ9Y4W2 734 aaKnown RBP16.74■□□□□ 0.27
SCAF8-203ENST00000417268 MIA2Q96PC5 1412 aa16.74■□□□□ 0.27
SCAF8-203ENST00000417268 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
SCAF8-203ENST00000417268 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
SCAF8-203ENST00000417268 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
SCAF8-203ENST00000417268 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
SCAF8-203ENST00000417268 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
SCAF8-203ENST00000417268 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
SCAF8-203ENST00000417268 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
SCAF8-203ENST00000417268 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
SCAF8-203ENST00000417268 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
SCAF8-203ENST00000417268 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
SCAF8-203ENST00000417268 ERICH6BQ5W0A0 696 aa16.68■□□□□ 0.26
SCAF8-203ENST00000417268 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
SCAF8-203ENST00000417268 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
SCAF8-203ENST00000417268 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
SCAF8-203ENST00000417268 PLB1Q6P1J6 1458 aa16.65■□□□□ 0.26
SCAF8-203ENST00000417268 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
SCAF8-203ENST00000417268 KTN1Q86UP2 1357 aaKnown RBP16.65■□□□□ 0.26
SCAF8-203ENST00000417268 SOX12O15370 315 aa16.64■□□□□ 0.25
SCAF8-203ENST00000417268 CDK13Q14004 1512 aaKnown RBP16.63■□□□□ 0.25
SCAF8-203ENST00000417268 C9orf84Q5VXU9 1444 aa16.63■□□□□ 0.25
SCAF8-203ENST00000417268 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
SCAF8-203ENST00000417268 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
SCAF8-203ENST00000417268 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCAF8-203ENST00000417268 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
SCAF8-203ENST00000417268 BECN1Q14457 450 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms