RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 POTEJP0CG39 1038 aa10.35□□□□□ -0.75
TTC39DP-201ENST00000416781 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
TTC39DP-201ENST00000416781 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
TTC39DP-201ENST00000416781 SEC24BO95487 1268 aa10.33□□□□□ -0.76
TTC39DP-201ENST00000416781 MICALL2Q8IY33 904 aa10.31□□□□□ -0.76
TTC39DP-201ENST00000416781 G3V3G9 751 aa10.3□□□□□ -0.76
TTC39DP-201ENST00000416781 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
TTC39DP-201ENST00000416781 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
TTC39DP-201ENST00000416781 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
TTC39DP-201ENST00000416781 PDE4AP27815 886 aa10.28□□□□□ -0.76
TTC39DP-201ENST00000416781 P3H3Q8IVL6 736 aa10.28□□□□□ -0.76
TTC39DP-201ENST00000416781 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
TTC39DP-201ENST00000416781 NBR1Q14596 966 aa10.27□□□□□ -0.77
TTC39DP-201ENST00000416781 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
TTC39DP-201ENST00000416781 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
TTC39DP-201ENST00000416781 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
TTC39DP-201ENST00000416781 DDX27Q96GQ7 796 aaKnown RBP10.24□□□□□ -0.77
TTC39DP-201ENST00000416781 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
TTC39DP-201ENST00000416781 MFSD10Q14728 455 aa10.23□□□□□ -0.77
TTC39DP-201ENST00000416781 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
TTC39DP-201ENST00000416781 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
TTC39DP-201ENST00000416781 E2F4Q16254 413 aa10.21□□□□□ -0.78
TTC39DP-201ENST00000416781 TMC2Q8TDI7 906 aa10.2□□□□□ -0.78
TTC39DP-201ENST00000416781 GPHNQ9NQX3 736 aaPredicted RBP10.2□□□□□ -0.78
TTC39DP-201ENST00000416781 PPP1R15BQ5SWA1 713 aa10.18□□□□□ -0.78
TTC39DP-201ENST00000416781 SPNS2Q8IVW8 549 aa10.16□□□□□ -0.78
TTC39DP-201ENST00000416781 C3orf67Q6ZVT6 689 aa10.15□□□□□ -0.78
TTC39DP-201ENST00000416781 C2orf72A6NCS6 295 aa10.15□□□□□ -0.79
TTC39DP-201ENST00000416781 DSG2Q14126 1118 aa10.14□□□□□ -0.79
TTC39DP-201ENST00000416781 ARHGEF1Q92888 912 aaKnown RBP10.13□□□□□ -0.79
TTC39DP-201ENST00000416781 FOXK1P85037 733 aa10.12□□□□□ -0.79
TTC39DP-201ENST00000416781 KIF3CO14782 793 aa10.12□□□□□ -0.79
TTC39DP-201ENST00000416781 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
TTC39DP-201ENST00000416781 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
TTC39DP-201ENST00000416781 PLPP6Q8IY26 295 aa10.09□□□□□ -0.79
TTC39DP-201ENST00000416781 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
TTC39DP-201ENST00000416781 ST18O60284 1047 aa10.06□□□□□ -0.8
TTC39DP-201ENST00000416781 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
TTC39DP-201ENST00000416781 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
TTC39DP-201ENST00000416781 DPYSL4O14531 572 aa10.02□□□□□ -0.81
TTC39DP-201ENST00000416781 SEMA3EO15041 775 aa10.01□□□□□ -0.81
TTC39DP-201ENST00000416781 DAXXQ9UER7 740 aaPredicted RBP10.01□□□□□ -0.81
TTC39DP-201ENST00000416781 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
TTC39DP-201ENST00000416781 TPRNQ4KMQ1 711 aa9.99□□□□□ -0.81
TTC39DP-201ENST00000416781 UPF1Q92900 1129 aaKnown RBP eCLIP9.99□□□□□ -0.81
TTC39DP-201ENST00000416781 TESPA1A2RU30 521 aaPredicted RBP9.97□□□□□ -0.81
TTC39DP-201ENST00000416781 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
TTC39DP-201ENST00000416781 PRKCSHP14314 528 aaPredicted RBP9.96□□□□□ -0.81
TTC39DP-201ENST00000416781 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
TTC39DP-201ENST00000416781 PDIA6Q15084 440 aa9.96□□□□□ -0.82
TTC39DP-201ENST00000416781 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
TTC39DP-201ENST00000416781 OXER1Q8TDS5 423 aa9.95□□□□□ -0.82
TTC39DP-201ENST00000416781 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
TTC39DP-201ENST00000416781 SMYD5Q6GMV2 418 aa9.93□□□□□ -0.82
TTC39DP-201ENST00000416781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.93□□□□□ -0.82
TTC39DP-201ENST00000416781 SNPHO15079 494 aa9.9□□□□□ -0.82
TTC39DP-201ENST00000416781 SLC34A2O95436 690 aa9.9□□□□□ -0.82
TTC39DP-201ENST00000416781 ZNF316A6NFI3 1004 aaPredicted RBP9.9□□□□□ -0.83
TTC39DP-201ENST00000416781 TBC1D12O60347 775 aa9.9□□□□□ -0.83
TTC39DP-201ENST00000416781 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.83
TTC39DP-201ENST00000416781 PTCD2Q8WV60 388 aaKnown RBP9.9□□□□□ -0.83
TTC39DP-201ENST00000416781 EVI5O60447 810 aa9.87□□□□□ -0.83
TTC39DP-201ENST00000416781 DOK7Q18PE1 504 aa9.84□□□□□ -0.83
TTC39DP-201ENST00000416781 PCDHGA4Q9Y5G9 962 aa9.84□□□□□ -0.83
TTC39DP-201ENST00000416781 GRXCR2A6NFK2 248 aa9.83□□□□□ -0.84
TTC39DP-201ENST00000416781 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
TTC39DP-201ENST00000416781 RBM26Q5T8P6 1007 aaKnown RBP9.81□□□□□ -0.84
TTC39DP-201ENST00000416781 DDX12PQ92771 950 aa9.81□□□□□ -0.84
TTC39DP-201ENST00000416781 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
TTC39DP-201ENST00000416781 PTGER2P43116 358 aa9.8□□□□□ -0.84
TTC39DP-201ENST00000416781 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
TTC39DP-201ENST00000416781 GPIHBP1Q8IV16 184 aa9.78□□□□□ -0.84
TTC39DP-201ENST00000416781 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
TTC39DP-201ENST00000416781 ANO8Q9HCE9 1232 aaPredicted RBP9.77□□□□□ -0.84
TTC39DP-201ENST00000416781 ZSWIM6Q9HCJ5 1215 aa9.77□□□□□ -0.84
TTC39DP-201ENST00000416781 TTBK1Q5TCY1 1321 aaPredicted RBP9.77□□□□□ -0.85
TTC39DP-201ENST00000416781 ARSIQ5FYB1 569 aa9.76□□□□□ -0.85
TTC39DP-201ENST00000416781 MARVELD3Q96A59 401 aa9.76□□□□□ -0.85
TTC39DP-201ENST00000416781 NUDT7P0C024 238 aa9.75□□□□□ -0.85
TTC39DP-201ENST00000416781 OSBPP22059 807 aa9.75□□□□□ -0.85
TTC39DP-201ENST00000416781 KHSRPQ92945 711 aaKnown RBP eCLIP9.74□□□□□ -0.85
TTC39DP-201ENST00000416781 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
TTC39DP-201ENST00000416781 PHF14O94880 888 aa9.73□□□□□ -0.85
TTC39DP-201ENST00000416781 GPR153Q6NV75 609 aa9.73□□□□□ -0.85
TTC39DP-201ENST00000416781 NUTM2FA1L443 756 aa9.72□□□□□ -0.85
TTC39DP-201ENST00000416781 EPAS1Q99814 870 aa9.71□□□□□ -0.85
TTC39DP-201ENST00000416781 EMP3P54852 163 aa9.71□□□□□ -0.86
TTC39DP-201ENST00000416781 JPH4Q96JJ6 628 aa9.71□□□□□ -0.86
TTC39DP-201ENST00000416781 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
TTC39DP-201ENST00000416781 MYT1Q01538 1121 aa9.7□□□□□ -0.86
TTC39DP-201ENST00000416781 PCDHGA10Q9Y5H3 936 aa9.7□□□□□ -0.86
TTC39DP-201ENST00000416781 ZMYND10O75800 440 aa9.69□□□□□ -0.86
TTC39DP-201ENST00000416781 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
TTC39DP-201ENST00000416781 EN1Q05925 392 aaPredicted RBP9.68□□□□□ -0.86
TTC39DP-201ENST00000416781 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
TTC39DP-201ENST00000416781 MAP3K7O43318 606 aa9.67□□□□□ -0.86
TTC39DP-201ENST00000416781 FOSBP53539 338 aa9.67□□□□□ -0.86
TTC39DP-201ENST00000416781 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
TTC39DP-201ENST00000416781 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
TTC39DP-201ENST00000416781 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms