RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 ITSN2Q9NZM3 1697 aa34.79■■■■□ 3.16
LINC01342-201ENST00000416774 PTPRKQ15262 1439 aa34.78■■■■□ 3.16
LINC01342-201ENST00000416774 KCNH8Q96L42 1107 aa34.76■■■■□ 3.15
LINC01342-201ENST00000416774 AKNAQ7Z591 1439 aa34.74■■■■□ 3.15
LINC01342-201ENST00000416774 PLEKHD1A6NEE1 506 aa34.73■■■■□ 3.15
LINC01342-201ENST00000416774 KIF14Q15058 1648 aa34.69■■■■□ 3.14
LINC01342-201ENST00000416774 GLI2P10070 1586 aa34.69■■■■□ 3.14
LINC01342-201ENST00000416774 NAIPQ13075 1403 aa34.66■■■■□ 3.14
LINC01342-201ENST00000416774 GPATCH8Q9UKJ3 1502 aaKnown RBP34.65■■■■□ 3.14
LINC01342-201ENST00000416774 DNMT1P26358 1616 aaKnown RBP34.64■■■■□ 3.14
LINC01342-201ENST00000416774 GCC2Q8IWJ2 1684 aa34.64■■■■□ 3.14
LINC01342-201ENST00000416774 ACIN1Q9UKV3 1341 aaKnown RBP34.57■■■■□ 3.12
LINC01342-201ENST00000416774 DAPK1P53355 1430 aa34.57■■■■□ 3.12
LINC01342-201ENST00000416774 ROCK1Q13464 1354 aa34.57■■■■□ 3.12
LINC01342-201ENST00000416774 CDC42BPAQ5VT25 1732 aa34.55■■■■□ 3.12
LINC01342-201ENST00000416774 TSPOAP1O95153 1857 aa34.55■■■■□ 3.12
LINC01342-201ENST00000416774 MAP3K4Q9Y6R4 1608 aa34.54■■■■□ 3.12
LINC01342-201ENST00000416774 CFDP1Q9UEE9 299 aaPredicted RBP34.54■■■■□ 3.12
LINC01342-201ENST00000416774 CAMSAP2Q08AD1 1489 aa34.53■■■■□ 3.12
LINC01342-201ENST00000416774 ABCC5O15440 1437 aa34.52■■■■□ 3.12
LINC01342-201ENST00000416774 CD109Q6YHK3 1445 aa34.5■■■■□ 3.11
LINC01342-201ENST00000416774 ABCA9Q8IUA7 1624 aa34.46■■■■□ 3.11
LINC01342-201ENST00000416774 PPRC1Q5VV67 1664 aaKnown RBP34.44■■■■□ 3.1
LINC01342-201ENST00000416774 ZNF644Q9H582 1327 aaPredicted RBP34.43■■■■□ 3.1
LINC01342-201ENST00000416774 CROCC2H7BZ55 1655 aa34.42■■■■□ 3.1
LINC01342-201ENST00000416774 ADGBQ8N7X0 1667 aa34.41■■■■□ 3.1
LINC01342-201ENST00000416774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.4■■■■□ 3.1
LINC01342-201ENST00000416774 CHIC2Q9UKJ5 165 aa34.4■■■■□ 3.1
LINC01342-201ENST00000416774 TIMELESSQ9UNS1 1208 aa34.4■■■■□ 3.1
LINC01342-201ENST00000416774 ZNF316A6NFI3 1004 aaPredicted RBP34.39■■■■□ 3.1
LINC01342-201ENST00000416774 RRP7BPQ9NSQ0 103 aa34.39■■■■□ 3.1
LINC01342-201ENST00000416774 TEX14Q8IWB6 1497 aa34.38■■■■□ 3.09
LINC01342-201ENST00000416774 PREX2Q70Z35 1606 aa34.38■■■■□ 3.09
LINC01342-201ENST00000416774 ADGRL2O95490 1459 aa34.37■■■■□ 3.09
LINC01342-201ENST00000416774 TTC37Q6PGP7 1564 aa34.34■■■■□ 3.09
LINC01342-201ENST00000416774 SHANK2Q9UPX8 1470 aa34.33■■■■□ 3.09
LINC01342-201ENST00000416774 CDC42BPBQ9Y5S2 1711 aa34.31■■■■□ 3.08
LINC01342-201ENST00000416774 ARHGEF5Q12774 1597 aa34.31■■■■□ 3.08
LINC01342-201ENST00000416774 KDM6BO15054 1643 aa34.28■■■■□ 3.08
LINC01342-201ENST00000416774 ZNF777Q9ULD5 760 aaPredicted RBP34.27■■■■□ 3.08
LINC01342-201ENST00000416774 NCOA1Q15788 1441 aa34.26■■■■□ 3.07
LINC01342-201ENST00000416774 MYO5CQ9NQX4 1742 aa34.25■■■■□ 3.07
LINC01342-201ENST00000416774 RSPH4AQ5TD94 716 aa34.22■■■■□ 3.07
LINC01342-201ENST00000416774 ANKRD30AQ9BXX3 1397 aa34.22■■■■□ 3.07
LINC01342-201ENST00000416774 PLCH2O75038 1416 aa34.21■■■■□ 3.07
LINC01342-201ENST00000416774 SAMD9LQ8IVG5 1584 aa34.2■■■■□ 3.07
LINC01342-201ENST00000416774 MBD5Q9P267 1494 aa34.18■■■■□ 3.06
LINC01342-201ENST00000416774 PLEKHH2Q8IVE3 1493 aa34.17■■■■□ 3.06
LINC01342-201ENST00000416774 NEO1Q92859 1461 aa34.16■■■■□ 3.06
LINC01342-201ENST00000416774 COL17A1Q9UMD9 1497 aaPredicted RBP34.16■■■■□ 3.06
LINC01342-201ENST00000416774 SIN3AQ96ST3 1273 aa34.16■■■■□ 3.06
LINC01342-201ENST00000416774 FANCAO15360 1455 aa34.16■■■■□ 3.06
LINC01342-201ENST00000416774 C9orf84Q5VXU9 1444 aa34.14■■■■□ 3.06
LINC01342-201ENST00000416774 ARHGAP5Q13017 1502 aa34.13■■■■□ 3.05
LINC01342-201ENST00000416774 TRIM52Q96A61 297 aa34.13■■■■□ 3.05
LINC01342-201ENST00000416774 CCDC141Q6ZP82 1450 aa34.13■■■■□ 3.05
LINC01342-201ENST00000416774 DIEXFQ68CQ4 756 aaKnown RBP34.12■■■■□ 3.05
LINC01342-201ENST00000416774 KIAA1107Q9UPP5 1409 aa34.12■■■■□ 3.05
LINC01342-201ENST00000416774 TSPY4P0CV99 314 aa34.11■■■■□ 3.05
LINC01342-201ENST00000416774 TSPY10P0CW01 314 aa34.11■■■■□ 3.05
LINC01342-201ENST00000416774 EFCAB2Q5VUJ9 269 aa34.1■■■■□ 3.05
LINC01342-201ENST00000416774 ARAP3Q8WWN8 1544 aa34.1■■■■□ 3.05
LINC01342-201ENST00000416774 DENND4BO75064 1496 aaPredicted RBP34.09■■■■□ 3.05
LINC01342-201ENST00000416774 NEUROD1Q13562 356 aa34.09■■■■□ 3.05
LINC01342-201ENST00000416774 CFAP74Q9C0B2 1584 aa34.09■■■■□ 3.05
LINC01342-201ENST00000416774 MPHOSPH9Q99550 1183 aa34.08■■■■□ 3.05
LINC01342-201ENST00000416774 MAST1Q9Y2H9 1570 aa34.08■■■■□ 3.05
LINC01342-201ENST00000416774 HNRNPMP52272 730 aaKnown RBP eCLIP34.03■■■■□ 3.04
LINC01342-201ENST00000416774 ANKRD50Q9ULJ7 1429 aa34.02■■■■□ 3.04
LINC01342-201ENST00000416774 SYCP2Q9BX26 1530 aa34.01■■■■□ 3.03
LINC01342-201ENST00000416774 TONSLQ96HA7 1378 aa34■■■■□ 3.03
LINC01342-201ENST00000416774 RAPGEF3O95398 923 aa34■■■■□ 3.03
LINC01342-201ENST00000416774 PPP1R15AO75807 674 aaPredicted RBP33.99■■■■□ 3.03
LINC01342-201ENST00000416774 ADGRL1O94910 1474 aa33.98■■■■□ 3.03
LINC01342-201ENST00000416774 SCAPERQ9BY12 1400 aa33.95■■■■□ 3.03
LINC01342-201ENST00000416774 PZPP20742 1482 aa33.94■■■■□ 3.02
LINC01342-201ENST00000416774 KDM5DQ9BY66 1539 aa33.92■■■■□ 3.02
LINC01342-201ENST00000416774 KIF15Q9NS87 1388 aa33.92■■■■□ 3.02
LINC01342-201ENST00000416774 PLXNC1O60486 1568 aa33.91■■■■□ 3.02
LINC01342-201ENST00000416774 ABCC1P33527 1531 aa33.91■■■■□ 3.02
LINC01342-201ENST00000416774 ANKRD30BQ9BXX2 1392 aa33.9■■■■□ 3.02
LINC01342-201ENST00000416774 SLC4A1APQ9BWU0 796 aaKnown RBP33.89■■■■□ 3.02
LINC01342-201ENST00000416774 FRMPD1Q5SYB0 1578 aa33.88■■■■□ 3.01
LINC01342-201ENST00000416774 ARHGEF12Q9NZN5 1544 aa33.85■■■■□ 3.01
LINC01342-201ENST00000416774 RICTORQ6R327 1708 aa33.84■■■■□ 3.01
LINC01342-201ENST00000416774 POGZQ7Z3K3 1410 aa33.84■■■■□ 3.01
LINC01342-201ENST00000416774 RPRD2Q5VT52 1461 aaKnown RBP33.8■■■■□ 3
LINC01342-201ENST00000416774 AFAP1Q8N556 730 aa33.79■■■■□ 3
LINC01342-201ENST00000416774 ZNF518AQ6AHZ1 1483 aa33.76■■■■□ 3
LINC01342-201ENST00000416774 TRAPPC8Q9Y2L5 1435 aa33.76■■■■□ 3
LINC01342-201ENST00000416774 DUOX2Q9NRD8 1548 aa33.76■■■□□ 2.99
LINC01342-201ENST00000416774 RTEL1-TNFRSF6BF6WH68 1400 aa33.75■■■□□ 2.99
LINC01342-201ENST00000416774 NUP155O75694 1391 aa33.74■■■□□ 2.99
LINC01342-201ENST00000416774 UNC13BO14795 1591 aa33.73■■■□□ 2.99
LINC01342-201ENST00000416774 ZMYM4Q5VZL5 1548 aa33.72■■■□□ 2.99
LINC01342-201ENST00000416774 FOXD1Q16676 465 aa33.69■■■□□ 2.98
LINC01342-201ENST00000416774 ERBINQ96RT1 1412 aa33.69■■■□□ 2.98
LINC01342-201ENST00000416774 KDM5CP41229 1560 aa33.68■■■□□ 2.98
LINC01342-201ENST00000416774 MYT1LQ9UL68 1186 aa33.67■■■□□ 2.98
LINC01342-201ENST00000416774 MAGI2Q86UL8 1455 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms