RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 ZMYM4Q5VZL5 1548 aa15.74■□□□□ 0.11
CALCOCO2-203ENST00000416445 CLIP1P30622 1438 aa15.74■□□□□ 0.11
CALCOCO2-203ENST00000416445 MADDQ8WXG6 1647 aa15.73■□□□□ 0.11
CALCOCO2-203ENST00000416445 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.11
CALCOCO2-203ENST00000416445 CDC42BPAQ5VT25 1732 aa15.7■□□□□ 0.1
CALCOCO2-203ENST00000416445 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
CALCOCO2-203ENST00000416445 ZFYVE16Q7Z3T8 1539 aa15.69■□□□□ 0.1
CALCOCO2-203ENST00000416445 FYCO1Q9BQS8 1478 aa15.69■□□□□ 0.1
CALCOCO2-203ENST00000416445 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
CALCOCO2-203ENST00000416445 ARHGAP5Q13017 1502 aa15.68■□□□□ 0.1
CALCOCO2-203ENST00000416445 RIMS1Q86UR5 1692 aaKnown RBP15.68■□□□□ 0.1
CALCOCO2-203ENST00000416445 PTPRMP28827 1452 aa15.68■□□□□ 0.1
CALCOCO2-203ENST00000416445 ARHGEF12Q9NZN5 1544 aa15.67■□□□□ 0.1
CALCOCO2-203ENST00000416445 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
CALCOCO2-203ENST00000416445 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
CALCOCO2-203ENST00000416445 CDK11AQ9UQ88 783 aaPredicted RBP15.65■□□□□ 0.1
CALCOCO2-203ENST00000416445 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
CALCOCO2-203ENST00000416445 AFAP1Q8N556 730 aa15.63■□□□□ 0.09
CALCOCO2-203ENST00000416445 KDM5CP41229 1560 aa15.63■□□□□ 0.09
CALCOCO2-203ENST00000416445 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
CALCOCO2-203ENST00000416445 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
CALCOCO2-203ENST00000416445 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
CALCOCO2-203ENST00000416445 ABCC1P33527 1531 aa15.61■□□□□ 0.09
CALCOCO2-203ENST00000416445 CEP162Q5TB80 1403 aa15.61■□□□□ 0.09
CALCOCO2-203ENST00000416445 MAGI2Q86UL8 1455 aa15.61■□□□□ 0.09
CALCOCO2-203ENST00000416445 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
CALCOCO2-203ENST00000416445 DIP2CQ9Y2E4 1556 aa15.6■□□□□ 0.09
CALCOCO2-203ENST00000416445 FER1L4A9Z1Z3 1794 aa15.6■□□□□ 0.09
CALCOCO2-203ENST00000416445 MLECQ14165 292 aa15.6■□□□□ 0.09
CALCOCO2-203ENST00000416445 SAMD9LQ8IVG5 1584 aa15.59■□□□□ 0.09
CALCOCO2-203ENST00000416445 GPATCH8Q9UKJ3 1502 aaKnown RBP15.58■□□□□ 0.08
CALCOCO2-203ENST00000416445 ATP10AO60312 1499 aa15.58■□□□□ 0.08
CALCOCO2-203ENST00000416445 ZNF518AQ6AHZ1 1483 aa15.58■□□□□ 0.08
CALCOCO2-203ENST00000416445 KIDINS220Q9ULH0 1771 aa15.57■□□□□ 0.08
CALCOCO2-203ENST00000416445 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
CALCOCO2-203ENST00000416445 C9orf84Q5VXU9 1444 aa15.55■□□□□ 0.08
CALCOCO2-203ENST00000416445 LMTK3Q96Q04 1460 aa15.55■□□□□ 0.08
CALCOCO2-203ENST00000416445 SYCP2Q9BX26 1530 aa15.54■□□□□ 0.08
CALCOCO2-203ENST00000416445 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
CALCOCO2-203ENST00000416445 ZNF777Q9ULD5 760 aaPredicted RBP15.52■□□□□ 0.08
CALCOCO2-203ENST00000416445 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.08
CALCOCO2-203ENST00000416445 ZNF644Q9H582 1327 aaPredicted RBP15.5■□□□□ 0.07
CALCOCO2-203ENST00000416445 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.07
CALCOCO2-203ENST00000416445 FOXD1Q16676 465 aa15.5■□□□□ 0.07
CALCOCO2-203ENST00000416445 REREQ9P2R6 1566 aa15.49■□□□□ 0.07
CALCOCO2-203ENST00000416445 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
CALCOCO2-203ENST00000416445 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
CALCOCO2-203ENST00000416445 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
CALCOCO2-203ENST00000416445 HSPA2P54652 639 aa15.48■□□□□ 0.07
CALCOCO2-203ENST00000416445 MYT1LQ9UL68 1186 aa15.47■□□□□ 0.07
CALCOCO2-203ENST00000416445 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
CALCOCO2-203ENST00000416445 ILDR1Q86SU0 546 aaPredicted RBP15.46■□□□□ 0.07
CALCOCO2-203ENST00000416445 INO80Q9ULG1 1556 aaPredicted RBP15.46■□□□□ 0.06
CALCOCO2-203ENST00000416445 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.06
CALCOCO2-203ENST00000416445 C3P01024 1663 aa15.45■□□□□ 0.06
CALCOCO2-203ENST00000416445 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
CALCOCO2-203ENST00000416445 AGLP35573 1532 aa15.43■□□□□ 0.06
CALCOCO2-203ENST00000416445 ATP7AQ04656 1500 aa15.43■□□□□ 0.06
CALCOCO2-203ENST00000416445 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
CALCOCO2-203ENST00000416445 MBD5Q9P267 1494 aa15.42■□□□□ 0.06
CALCOCO2-203ENST00000416445 KIAA1107Q9UPP5 1409 aa15.42■□□□□ 0.06
CALCOCO2-203ENST00000416445 VPS8Q8N3P4 1428 aa15.41■□□□□ 0.06
CALCOCO2-203ENST00000416445 PLXNC1O60486 1568 aa15.41■□□□□ 0.06
CALCOCO2-203ENST00000416445 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
CALCOCO2-203ENST00000416445 SPAG9O60271 1321 aaKnown RBP15.4■□□□□ 0.06
CALCOCO2-203ENST00000416445 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
CALCOCO2-203ENST00000416445 ADGBQ8N7X0 1667 aa15.39■□□□□ 0.05
CALCOCO2-203ENST00000416445 PLEKHH2Q8IVE3 1493 aa15.38■□□□□ 0.05
CALCOCO2-203ENST00000416445 CAMSAP2Q08AD1 1489 aa15.37■□□□□ 0.05
CALCOCO2-203ENST00000416445 LRRC9Q6ZRR7 1453 aa15.37■□□□□ 0.05
CALCOCO2-203ENST00000416445 STRCQ7RTU9 1775 aa15.37■□□□□ 0.05
CALCOCO2-203ENST00000416445 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
CALCOCO2-203ENST00000416445 SETD1BQ9UPS6 1966 aaKnown RBP15.35■□□□□ 0.05
CALCOCO2-203ENST00000416445 A2MP01023 1474 aa15.35■□□□□ 0.05
CALCOCO2-203ENST00000416445 MROH2AA6NES4 1674 aa15.32■□□□□ 0.04
CALCOCO2-203ENST00000416445 CCDC141Q6ZP82 1450 aa15.3■□□□□ 0.04
CALCOCO2-203ENST00000416445 ARHGEF5Q12774 1597 aa15.28■□□□□ 0.04
CALCOCO2-203ENST00000416445 MAP3K1Q13233 1512 aa15.28■□□□□ 0.04
CALCOCO2-203ENST00000416445 UHRF1BP1Q6BDS2 1440 aa15.28■□□□□ 0.04
CALCOCO2-203ENST00000416445 ZMYM3Q14202 1370 aa15.27■□□□□ 0.04
CALCOCO2-203ENST00000416445 GGT6Q6P531 493 aa15.27■□□□□ 0.04
CALCOCO2-203ENST00000416445 RTEL1-TNFRSF6BF6WH68 1400 aa15.27■□□□□ 0.03
CALCOCO2-203ENST00000416445 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
CALCOCO2-203ENST00000416445 DHX29Q7Z478 1369 aaKnown RBP15.24■□□□□ 0.03
CALCOCO2-203ENST00000416445 MYO3AQ8NEV4 1616 aa15.24■□□□□ 0.03
CALCOCO2-203ENST00000416445 ESF1Q9H501 851 aaKnown RBP15.24■□□□□ 0.03
CALCOCO2-203ENST00000416445 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
CALCOCO2-203ENST00000416445 MYOM3Q5VTT5 1437 aa15.23■□□□□ 0.03
CALCOCO2-203ENST00000416445 MAST1Q9Y2H9 1570 aa15.21■□□□□ 0.03
CALCOCO2-203ENST00000416445 ZNF142P52746 1687 aaPredicted RBP15.21■□□□□ 0.03
CALCOCO2-203ENST00000416445 NPATQ14207 1427 aa15.2■□□□□ 0.02
CALCOCO2-203ENST00000416445 KIF3BO15066 747 aa15.2■□□□□ 0.02
CALCOCO2-203ENST00000416445 CAMSAP1Q5T5Y3 1602 aa15.2■□□□□ 0.02
CALCOCO2-203ENST00000416445 CROCC2H7BZ55 1655 aa15.19■□□□□ 0.02
CALCOCO2-203ENST00000416445 FBXO41Q8TF61 875 aa15.19■□□□□ 0.02
CALCOCO2-203ENST00000416445 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
CALCOCO2-203ENST00000416445 NCOA1Q15788 1441 aa15.19■□□□□ 0.02
CALCOCO2-203ENST00000416445 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
CALCOCO2-203ENST00000416445 FBXO31Q5XUX0 539 aaPredicted RBP15.18■□□□□ 0.02
CALCOCO2-203ENST00000416445 CEP170BQ9Y4F5 1589 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms