RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
CALCOCO2-203ENST00000416445 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
CALCOCO2-203ENST00000416445 ABCC9O60706 1549 aa21.45■■□□□ 1.02
CALCOCO2-203ENST00000416445 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
CALCOCO2-203ENST00000416445 NACADO15069 1562 aa20.27■□□□□ 0.84
CALCOCO2-203ENST00000416445 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
CALCOCO2-203ENST00000416445 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
CALCOCO2-203ENST00000416445 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
CALCOCO2-203ENST00000416445 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
CALCOCO2-203ENST00000416445 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
CALCOCO2-203ENST00000416445 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
CALCOCO2-203ENST00000416445 BICRAQ9NZM4 1560 aa19.93■□□□□ 0.78
CALCOCO2-203ENST00000416445 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
CALCOCO2-203ENST00000416445 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
CALCOCO2-203ENST00000416445 SHROOM4Q9ULL8 1493 aa19.44■□□□□ 0.7
CALCOCO2-203ENST00000416445 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
CALCOCO2-203ENST00000416445 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
CALCOCO2-203ENST00000416445 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
CALCOCO2-203ENST00000416445 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
CALCOCO2-203ENST00000416445 SMARCA4P51532 1647 aa18.79■□□□□ 0.6
CALCOCO2-203ENST00000416445 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
CALCOCO2-203ENST00000416445 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
CALCOCO2-203ENST00000416445 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
CALCOCO2-203ENST00000416445 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.57
CALCOCO2-203ENST00000416445 SMARCA2P51531 1590 aa18.63■□□□□ 0.57
CALCOCO2-203ENST00000416445 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
CALCOCO2-203ENST00000416445 PEG3Q9GZU2 1588 aa18.56■□□□□ 0.56
CALCOCO2-203ENST00000416445 BAZ1BQ9UIG0 1483 aaKnown RBP18.53■□□□□ 0.56
CALCOCO2-203ENST00000416445 NESP48681 1621 aa18.52■□□□□ 0.56
CALCOCO2-203ENST00000416445 WIZO95785 1651 aa18.44■□□□□ 0.54
CALCOCO2-203ENST00000416445 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
CALCOCO2-203ENST00000416445 CUX2O14529 1486 aa18.3■□□□□ 0.52
CALCOCO2-203ENST00000416445 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
CALCOCO2-203ENST00000416445 THOC2Q8NI27 1593 aaKnown RBP18.27■□□□□ 0.52
CALCOCO2-203ENST00000416445 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.52
CALCOCO2-203ENST00000416445 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
CALCOCO2-203ENST00000416445 CHIC1Q5VXU3 224 aa18.24■□□□□ 0.51
CALCOCO2-203ENST00000416445 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
CALCOCO2-203ENST00000416445 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
CALCOCO2-203ENST00000416445 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
CALCOCO2-203ENST00000416445 PDS5BQ9NTI5 1447 aa18.11■□□□□ 0.49
CALCOCO2-203ENST00000416445 CFTRP13569 1480 aa18.01■□□□□ 0.47
CALCOCO2-203ENST00000416445 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
CALCOCO2-203ENST00000416445 WDR62O43379 1518 aa18■□□□□ 0.47
CALCOCO2-203ENST00000416445 FANCD2Q9BXW9 1451 aa17.99■□□□□ 0.47
CALCOCO2-203ENST00000416445 CCDC88BA6NC98 1476 aa17.96■□□□□ 0.47
CALCOCO2-203ENST00000416445 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
CALCOCO2-203ENST00000416445 PRDM2Q13029 1718 aa17.91■□□□□ 0.46
CALCOCO2-203ENST00000416445 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
CALCOCO2-203ENST00000416445 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
CALCOCO2-203ENST00000416445 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
CALCOCO2-203ENST00000416445 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
CALCOCO2-203ENST00000416445 IFT140Q96RY7 1462 aa17.58■□□□□ 0.4
CALCOCO2-203ENST00000416445 TARBP1Q13395 1621 aaKnown RBP17.56■□□□□ 0.4
CALCOCO2-203ENST00000416445 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
CALCOCO2-203ENST00000416445 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
CALCOCO2-203ENST00000416445 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
CALCOCO2-203ENST00000416445 ABCC8Q09428 1581 aa17.51■□□□□ 0.39
CALCOCO2-203ENST00000416445 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
CALCOCO2-203ENST00000416445 AQRO60306 1485 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■■■□ 26.1
CALCOCO2-203ENST00000416445 CUX1P39880 1505 aa17.48■□□□□ 0.39
CALCOCO2-203ENST00000416445 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
CALCOCO2-203ENST00000416445 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CALCOCO2-203ENST00000416445 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
CALCOCO2-203ENST00000416445 CHD1O14646 1710 aa17.43■□□□□ 0.38
CALCOCO2-203ENST00000416445 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
CALCOCO2-203ENST00000416445 SOGA1O94964 1423 aa17.4■□□□□ 0.38
CALCOCO2-203ENST00000416445 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
CALCOCO2-203ENST00000416445 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
CALCOCO2-203ENST00000416445 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
CALCOCO2-203ENST00000416445 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
CALCOCO2-203ENST00000416445 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
CALCOCO2-203ENST00000416445 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
CALCOCO2-203ENST00000416445 FBLN2P98095 1184 aa17.27■□□□□ 0.35
CALCOCO2-203ENST00000416445 PBRM1Q86U86 1689 aa17.27■□□□□ 0.35
CALCOCO2-203ENST00000416445 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
CALCOCO2-203ENST00000416445 ABCA5Q8WWZ7 1642 aa17.23■□□□□ 0.35
CALCOCO2-203ENST00000416445 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
CALCOCO2-203ENST00000416445 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
CALCOCO2-203ENST00000416445 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
CALCOCO2-203ENST00000416445 TOP2BQ02880 1626 aa17.2■□□□□ 0.34
CALCOCO2-203ENST00000416445 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
CALCOCO2-203ENST00000416445 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
CALCOCO2-203ENST00000416445 MAGI1Q96QZ7 1491 aaPredicted RBP17.19■□□□□ 0.34
CALCOCO2-203ENST00000416445 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
CALCOCO2-203ENST00000416445 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
CALCOCO2-203ENST00000416445 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
CALCOCO2-203ENST00000416445 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO2-203ENST00000416445 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
CALCOCO2-203ENST00000416445 ADAMTS12P58397 1594 aa17.08■□□□□ 0.32
CALCOCO2-203ENST00000416445 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
CALCOCO2-203ENST00000416445 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
CALCOCO2-203ENST00000416445 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
CALCOCO2-203ENST00000416445 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
CALCOCO2-203ENST00000416445 NUP160Q12769 1436 aa16.96■□□□□ 0.31
CALCOCO2-203ENST00000416445 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
CALCOCO2-203ENST00000416445 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
CALCOCO2-203ENST00000416445 RUSC2Q8N2Y8 1516 aa16.85■□□□□ 0.29
CALCOCO2-203ENST00000416445 IGF1RP08069 1367 aa16.83■□□□□ 0.29
CALCOCO2-203ENST00000416445 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms