RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PLCH2O75038 1416 aa25.63■■□□□ 1.69
SBDSP1-201ENST00000415772 EFCAB2Q5VUJ9 269 aa25.61■■□□□ 1.69
SBDSP1-201ENST00000415772 YEATS2Q9ULM3 1422 aa25.61■■□□□ 1.69
SBDSP1-201ENST00000415772 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
SBDSP1-201ENST00000415772 FBXO41Q8TF61 875 aa25.59■■□□□ 1.69
SBDSP1-201ENST00000415772 MYT1LQ9UL68 1186 aa25.59■■□□□ 1.69
SBDSP1-201ENST00000415772 CLIP1P30622 1438 aa25.58■■□□□ 1.69
SBDSP1-201ENST00000415772 KIF14Q15058 1648 aa25.58■■□□□ 1.69
SBDSP1-201ENST00000415772 ARHGAP35Q9NRY4 1499 aa25.58■■□□□ 1.69
SBDSP1-201ENST00000415772 LMTK3Q96Q04 1460 aa25.57■■□□□ 1.68
SBDSP1-201ENST00000415772 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
SBDSP1-201ENST00000415772 FER1L4A9Z1Z3 1794 aa25.52■■□□□ 1.68
SBDSP1-201ENST00000415772 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
SBDSP1-201ENST00000415772 TROQ12816 1431 aaPredicted RBP25.51■■□□□ 1.67
SBDSP1-201ENST00000415772 ATP10AO60312 1499 aa25.5■■□□□ 1.67
SBDSP1-201ENST00000415772 HSPA2P54652 639 aa25.5■■□□□ 1.67
SBDSP1-201ENST00000415772 C9orf84Q5VXU9 1444 aa25.5■■□□□ 1.67
SBDSP1-201ENST00000415772 ZNF518AQ6AHZ1 1483 aa25.48■■□□□ 1.67
SBDSP1-201ENST00000415772 SIGLEC1Q9BZZ2 1709 aa25.48■■□□□ 1.67
SBDSP1-201ENST00000415772 CCDC18Q5T9S5 1454 aa25.4■■□□□ 1.66
SBDSP1-201ENST00000415772 AFAP1Q8N556 730 aa25.4■■□□□ 1.66
SBDSP1-201ENST00000415772 ARHGEF12Q9NZN5 1544 aa25.39■■□□□ 1.66
SBDSP1-201ENST00000415772 ESF1Q9H501 851 aaKnown RBP25.38■■□□□ 1.65
SBDSP1-201ENST00000415772 LRRIQ1Q96JM4 1722 aa25.37■■□□□ 1.65
SBDSP1-201ENST00000415772 KDM5CP41229 1560 aa25.35■■□□□ 1.65
SBDSP1-201ENST00000415772 CASKIN1Q8WXD9 1431 aa25.35■■□□□ 1.65
SBDSP1-201ENST00000415772 PREX1Q8TCU6 1659 aa25.34■■□□□ 1.65
SBDSP1-201ENST00000415772 CEBPAP49715 358 aaPredicted RBP25.33■■□□□ 1.65
SBDSP1-201ENST00000415772 CDC42BPBQ9Y5S2 1711 aa25.33■■□□□ 1.65
SBDSP1-201ENST00000415772 PREX2Q70Z35 1606 aa25.33■■□□□ 1.65
SBDSP1-201ENST00000415772 DIP2CQ9Y2E4 1556 aa25.31■■□□□ 1.64
SBDSP1-201ENST00000415772 UHRF1BP1Q6BDS2 1440 aa25.29■■□□□ 1.64
SBDSP1-201ENST00000415772 ZNF777Q9ULD5 760 aaPredicted RBP25.28■■□□□ 1.64
SBDSP1-201ENST00000415772 MLH3Q9UHC1 1453 aa25.28■■□□□ 1.64
SBDSP1-201ENST00000415772 ABCC1P33527 1531 aa25.27■■□□□ 1.64
SBDSP1-201ENST00000415772 FYCO1Q9BQS8 1478 aa25.27■■□□□ 1.64
SBDSP1-201ENST00000415772 REREQ9P2R6 1566 aa25.27■■□□□ 1.64
SBDSP1-201ENST00000415772 ABCA6Q8N139 1617 aa25.26■■□□□ 1.63
SBDSP1-201ENST00000415772 CERKQ8TCT0 537 aa25.26■■□□□ 1.63
SBDSP1-201ENST00000415772 DMRT2Q9Y5R5 561 aa25.26■■□□□ 1.63
SBDSP1-201ENST00000415772 ITSN2Q9NZM3 1697 aa25.26■■□□□ 1.63
SBDSP1-201ENST00000415772 TRAPPC8Q9Y2L5 1435 aa25.24■■□□□ 1.63
SBDSP1-201ENST00000415772 CDC42BPAQ5VT25 1732 aa25.2■■□□□ 1.63
SBDSP1-201ENST00000415772 AGLP35573 1532 aa25.19■■□□□ 1.62
SBDSP1-201ENST00000415772 C3P01024 1663 aa25.17■■□□□ 1.62
SBDSP1-201ENST00000415772 SPAG9O60271 1321 aaKnown RBP25.15■■□□□ 1.62
SBDSP1-201ENST00000415772 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
SBDSP1-201ENST00000415772 CNTLNQ9NXG0 1405 aa25.14■■□□□ 1.62
SBDSP1-201ENST00000415772 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
SBDSP1-201ENST00000415772 SAMD9LQ8IVG5 1584 aa25.13■■□□□ 1.61
SBDSP1-201ENST00000415772 CFDP1Q9UEE9 299 aaPredicted RBP25.12■■□□□ 1.61
SBDSP1-201ENST00000415772 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
SBDSP1-201ENST00000415772 SETD1BQ9UPS6 1966 aaKnown RBP25.11■■□□□ 1.61
SBDSP1-201ENST00000415772 MTUS2Q5JR59 1369 aa25.11■■□□□ 1.61
SBDSP1-201ENST00000415772 HNRNPMP52272 730 aaKnown RBP eCLIP25.11■■□□□ 1.61
SBDSP1-201ENST00000415772 GPATCH8Q9UKJ3 1502 aaKnown RBP25.1■■□□□ 1.61
SBDSP1-201ENST00000415772 PLEKHH2Q8IVE3 1493 aa25.09■■□□□ 1.61
SBDSP1-201ENST00000415772 STRCQ7RTU9 1775 aa25.08■■□□□ 1.61
SBDSP1-201ENST00000415772 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
SBDSP1-201ENST00000415772 ATP7AQ04656 1500 aa25.05■■□□□ 1.6
SBDSP1-201ENST00000415772 PTPRTO14522 1441 aa25.03■■□□□ 1.6
SBDSP1-201ENST00000415772 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
SBDSP1-201ENST00000415772 MROH2AA6NES4 1674 aa25.02■■□□□ 1.6
SBDSP1-201ENST00000415772 A2MP01023 1474 aa24.99■■□□□ 1.59
SBDSP1-201ENST00000415772 ZMYM3Q14202 1370 aa24.99■■□□□ 1.59
SBDSP1-201ENST00000415772 NPATQ14207 1427 aa24.99■■□□□ 1.59
SBDSP1-201ENST00000415772 GGT6Q6P531 493 aa24.99■■□□□ 1.59
SBDSP1-201ENST00000415772 INO80Q9ULG1 1556 aaPredicted RBP24.97■■□□□ 1.59
SBDSP1-201ENST00000415772 CLTCQ00610 1675 aaKnown RBP24.96■■□□□ 1.59
SBDSP1-201ENST00000415772 EHBP1L1Q8N3D4 1523 aa24.96■■□□□ 1.59
SBDSP1-201ENST00000415772 NCOA1Q15788 1441 aa24.95■■□□□ 1.58
SBDSP1-201ENST00000415772 CAMSAP1Q5T5Y3 1602 aa24.94■■□□□ 1.58
SBDSP1-201ENST00000415772 ADGBQ8N7X0 1667 aa24.92■■□□□ 1.58
SBDSP1-201ENST00000415772 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
SBDSP1-201ENST00000415772 TIAM1Q13009 1591 aa24.91■■□□□ 1.58
SBDSP1-201ENST00000415772 ZNF644Q9H582 1327 aaPredicted RBP24.88■■□□□ 1.57
SBDSP1-201ENST00000415772 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
SBDSP1-201ENST00000415772 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
SBDSP1-201ENST00000415772 DISP3Q9P2K9 1392 aa24.87■■□□□ 1.57
SBDSP1-201ENST00000415772 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
SBDSP1-201ENST00000415772 NCKAP5LQ9HCH0 1330 aa24.86■■□□□ 1.57
SBDSP1-201ENST00000415772 ZNF142P52746 1687 aaPredicted RBP24.83■■□□□ 1.57
SBDSP1-201ENST00000415772 PKD2Q13563 968 aa24.83■■□□□ 1.57
SBDSP1-201ENST00000415772 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.57
SBDSP1-201ENST00000415772 PTPRKQ15262 1439 aa24.83■■□□□ 1.57
SBDSP1-201ENST00000415772 CEP170BQ9Y4F5 1589 aaPredicted RBP24.83■■□□□ 1.57
SBDSP1-201ENST00000415772 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.56
SBDSP1-201ENST00000415772 LTBP4Q8N2S1 1624 aa24.83■■□□□ 1.56
SBDSP1-201ENST00000415772 MBD5Q9P267 1494 aa24.8■■□□□ 1.56
SBDSP1-201ENST00000415772 DHX29Q7Z478 1369 aaKnown RBP24.8■■□□□ 1.56
SBDSP1-201ENST00000415772 PLA2R1Q13018 1463 aa24.79■■□□□ 1.56
SBDSP1-201ENST00000415772 KIF3BO15066 747 aa24.79■■□□□ 1.56
SBDSP1-201ENST00000415772 CCDC141Q6ZP82 1450 aa24.78■■□□□ 1.56
SBDSP1-201ENST00000415772 RSPH4AQ5TD94 716 aa24.77■■□□□ 1.56
SBDSP1-201ENST00000415772 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
SBDSP1-201ENST00000415772 NCOA2Q15596 1464 aa24.77■■□□□ 1.56
SBDSP1-201ENST00000415772 ZNF335Q9H4Z2 1342 aaPredicted RBP24.76■■□□□ 1.55
SBDSP1-201ENST00000415772 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
SBDSP1-201ENST00000415772 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
SBDSP1-201ENST00000415772 A2ML1A8K2U0 1454 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms