RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
ZNF3-206ENST00000415068 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
ZNF3-206ENST00000415068 KIAA1107Q9UPP5 1409 aa19.93■□□□□ 0.78
ZNF3-206ENST00000415068 CYB5RLQ6IPT4 315 aa19.91■□□□□ 0.78
ZNF3-206ENST00000415068 KCNH8Q96L42 1107 aa19.91■□□□□ 0.78
ZNF3-206ENST00000415068 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
ZNF3-206ENST00000415068 HFM1A2PYH4 1435 aa19.91■□□□□ 0.78
ZNF3-206ENST00000415068 ABCC5O15440 1437 aa19.91■□□□□ 0.78
ZNF3-206ENST00000415068 EFCAB2Q5VUJ9 269 aa19.9■□□□□ 0.78
ZNF3-206ENST00000415068 PREX2Q70Z35 1606 aa19.9■□□□□ 0.78
ZNF3-206ENST00000415068 DNMT1P26358 1616 aaKnown RBP19.89■□□□□ 0.77
ZNF3-206ENST00000415068 DAPK1P53355 1430 aa19.89■□□□□ 0.77
ZNF3-206ENST00000415068 PLEKHH2Q8IVE3 1493 aa19.89■□□□□ 0.77
ZNF3-206ENST00000415068 CDC42BPBQ9Y5S2 1711 aa19.89■□□□□ 0.77
ZNF3-206ENST00000415068 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
ZNF3-206ENST00000415068 ITGAEP38570 1179 aa19.88■□□□□ 0.77
ZNF3-206ENST00000415068 ABCA9Q8IUA7 1624 aa19.87■□□□□ 0.77
ZNF3-206ENST00000415068 MAPKBP1O60336 1514 aa19.87■□□□□ 0.77
ZNF3-206ENST00000415068 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
ZNF3-206ENST00000415068 MBD5Q9P267 1494 aa19.86■□□□□ 0.77
ZNF3-206ENST00000415068 NAIPQ13075 1403 aa19.85■□□□□ 0.77
ZNF3-206ENST00000415068 TTC37Q6PGP7 1564 aa19.85■□□□□ 0.77
ZNF3-206ENST00000415068 MYO5CQ9NQX4 1742 aa19.85■□□□□ 0.77
ZNF3-206ENST00000415068 RAB3GAP2Q9H2M9 1393 aa19.84■□□□□ 0.77
ZNF3-206ENST00000415068 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
ZNF3-206ENST00000415068 ADGRL2O95490 1459 aa19.83■□□□□ 0.76
ZNF3-206ENST00000415068 SHANK2Q9UPX8 1470 aa19.82■□□□□ 0.76
ZNF3-206ENST00000415068 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
ZNF3-206ENST00000415068 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
ZNF3-206ENST00000415068 NCOA1Q15788 1441 aa19.81■□□□□ 0.76
ZNF3-206ENST00000415068 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
ZNF3-206ENST00000415068 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
ZNF3-206ENST00000415068 ARHGAP5Q13017 1502 aa19.78■□□□□ 0.76
ZNF3-206ENST00000415068 DHX57Q6P158 1386 aaKnown RBP19.78■□□□□ 0.76
ZNF3-206ENST00000415068 HNRNPMP52272 730 aaKnown RBP eCLIP19.77■□□□□ 0.76
ZNF3-206ENST00000415068 GLI2P10070 1586 aa19.77■□□□□ 0.76
ZNF3-206ENST00000415068 ANKRD30AQ9BXX3 1397 aa19.76■□□□□ 0.75
ZNF3-206ENST00000415068 CCDC141Q6ZP82 1450 aa19.74■□□□□ 0.75
ZNF3-206ENST00000415068 MAST1Q9Y2H9 1570 aa19.74■□□□□ 0.75
ZNF3-206ENST00000415068 CROCC2H7BZ55 1655 aa19.73■□□□□ 0.75
ZNF3-206ENST00000415068 CHIC2Q9UKJ5 165 aa19.73■□□□□ 0.75
ZNF3-206ENST00000415068 CD109Q6YHK3 1445 aa19.73■□□□□ 0.75
ZNF3-206ENST00000415068 GCC2Q8IWJ2 1684 aa19.72■□□□□ 0.75
ZNF3-206ENST00000415068 RTEL1-TNFRSF6BF6WH68 1400 aa19.72■□□□□ 0.75
ZNF3-206ENST00000415068 RRP7BPQ9NSQ0 103 aa19.71■□□□□ 0.75
ZNF3-206ENST00000415068 C9orf84Q5VXU9 1444 aa19.7■□□□□ 0.74
ZNF3-206ENST00000415068 FANCAO15360 1455 aa19.7■□□□□ 0.74
ZNF3-206ENST00000415068 ARHGEF12Q9NZN5 1544 aa19.7■□□□□ 0.74
ZNF3-206ENST00000415068 ABCC1P33527 1531 aa19.69■□□□□ 0.74
ZNF3-206ENST00000415068 ADGBQ8N7X0 1667 aa19.68■□□□□ 0.74
ZNF3-206ENST00000415068 NEO1Q92859 1461 aa19.67■□□□□ 0.74
ZNF3-206ENST00000415068 SYCP2Q9BX26 1530 aa19.66■□□□□ 0.74
ZNF3-206ENST00000415068 CFAP74Q9C0B2 1584 aa19.65■□□□□ 0.74
ZNF3-206ENST00000415068 MAP3K4Q9Y6R4 1608 aa19.63■□□□□ 0.73
ZNF3-206ENST00000415068 TIMELESSQ9UNS1 1208 aa19.63■□□□□ 0.73
ZNF3-206ENST00000415068 TRAPPC8Q9Y2L5 1435 aa19.62■□□□□ 0.73
ZNF3-206ENST00000415068 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
ZNF3-206ENST00000415068 ANKRD50Q9ULJ7 1429 aa19.61■□□□□ 0.73
ZNF3-206ENST00000415068 PLXNC1O60486 1568 aa19.61■□□□□ 0.73
ZNF3-206ENST00000415068 DNAJC5Q9H3Z4 198 aa19.59■□□□□ 0.73
ZNF3-206ENST00000415068 ADGRL1O94910 1474 aa19.59■□□□□ 0.73
ZNF3-206ENST00000415068 KIF15Q9NS87 1388 aa19.58■□□□□ 0.73
ZNF3-206ENST00000415068 SPAG9O60271 1321 aaKnown RBP19.58■□□□□ 0.73
ZNF3-206ENST00000415068 FAM69CQ0P6D2 419 aa19.58■□□□□ 0.72
ZNF3-206ENST00000415068 AFAP1Q8N556 730 aa19.58■□□□□ 0.72
ZNF3-206ENST00000415068 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
ZNF3-206ENST00000415068 KDM6BO15054 1643 aa19.56■□□□□ 0.72
ZNF3-206ENST00000415068 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
ZNF3-206ENST00000415068 DUOX2Q9NRD8 1548 aa19.56■□□□□ 0.72
ZNF3-206ENST00000415068 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
ZNF3-206ENST00000415068 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
ZNF3-206ENST00000415068 ERBINQ96RT1 1412 aa19.52■□□□□ 0.72
ZNF3-206ENST00000415068 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
ZNF3-206ENST00000415068 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
ZNF3-206ENST00000415068 KDM5CP41229 1560 aa19.51■□□□□ 0.71
ZNF3-206ENST00000415068 TEX14Q8IWB6 1497 aa19.5■□□□□ 0.71
ZNF3-206ENST00000415068 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
ZNF3-206ENST00000415068 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
ZNF3-206ENST00000415068 INO80Q9ULG1 1556 aaPredicted RBP19.49■□□□□ 0.71
ZNF3-206ENST00000415068 DHX29Q7Z478 1369 aaKnown RBP19.48■□□□□ 0.71
ZNF3-206ENST00000415068 ZFYVE16Q7Z3T8 1539 aa19.47■□□□□ 0.71
ZNF3-206ENST00000415068 PZPP20742 1482 aa19.47■□□□□ 0.71
ZNF3-206ENST00000415068 ATP7AQ04656 1500 aa19.46■□□□□ 0.71
ZNF3-206ENST00000415068 SLC4A1APQ9BWU0 796 aaKnown RBP19.45■□□□□ 0.7
ZNF3-206ENST00000415068 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
ZNF3-206ENST00000415068 NUP155O75694 1391 aa19.44■□□□□ 0.7
ZNF3-206ENST00000415068 KIDINS220Q9ULH0 1771 aa19.43■□□□□ 0.7
ZNF3-206ENST00000415068 MAGI2Q86UL8 1455 aa19.42■□□□□ 0.7
ZNF3-206ENST00000415068 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
ZNF3-206ENST00000415068 PPRC1Q5VV67 1664 aaKnown RBP19.42■□□□□ 0.7
ZNF3-206ENST00000415068 UNC13BO14795 1591 aa19.41■□□□□ 0.7
ZNF3-206ENST00000415068 RICTORQ6R327 1708 aa19.39■□□□□ 0.69
ZNF3-206ENST00000415068 SIN3AQ96ST3 1273 aa19.38■□□□□ 0.69
ZNF3-206ENST00000415068 EIF2AK4Q9P2K8 1649 aaKnown RBP19.38■□□□□ 0.69
ZNF3-206ENST00000415068 ZMYM4Q5VZL5 1548 aa19.37■□□□□ 0.69
ZNF3-206ENST00000415068 RAPGEF3O95398 923 aa19.37■□□□□ 0.69
ZNF3-206ENST00000415068 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
ZNF3-206ENST00000415068 PKD2Q13563 968 aa19.36■□□□□ 0.69
ZNF3-206ENST00000415068 A2MP01023 1474 aa19.35■□□□□ 0.69
ZNF3-206ENST00000415068 BCORL1Q5H9F3 1711 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms