RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 SAMD9Q5K651 1589 aa21.9■■□□□ 1.1
PCCA-204ENST00000413170 PREX1Q8TCU6 1659 aa21.88■■□□□ 1.09
PCCA-204ENST00000413170 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
PCCA-204ENST00000413170 HECW1Q76N89 1606 aa21.85■■□□□ 1.09
PCCA-204ENST00000413170 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
PCCA-204ENST00000413170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
PCCA-204ENST00000413170 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
PCCA-204ENST00000413170 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
PCCA-204ENST00000413170 ARHGEF12Q9NZN5 1544 aa21.84■■□□□ 1.09
PCCA-204ENST00000413170 STRCQ7RTU9 1775 aa21.84■■□□□ 1.09
PCCA-204ENST00000413170 RANGAP1P46060 587 aaPredicted RBP21.81■■□□□ 1.08
PCCA-204ENST00000413170 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
PCCA-204ENST00000413170 SCAPERQ9BY12 1400 aa21.78■■□□□ 1.08
PCCA-204ENST00000413170 C9orf84Q5VXU9 1444 aa21.77■■□□□ 1.08
PCCA-204ENST00000413170 ATP10AO60312 1499 aa21.77■■□□□ 1.07
PCCA-204ENST00000413170 PTPRTO14522 1441 aa21.72■■□□□ 1.07
PCCA-204ENST00000413170 LTBP4Q8N2S1 1624 aa21.69■■□□□ 1.06
PCCA-204ENST00000413170 PLCH2O75038 1416 aa21.68■■□□□ 1.06
PCCA-204ENST00000413170 CDK13Q14004 1512 aaKnown RBP21.67■■□□□ 1.06
PCCA-204ENST00000413170 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.05
PCCA-204ENST00000413170 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
PCCA-204ENST00000413170 CSRNP3Q8WYN3 585 aa21.61■■□□□ 1.05
PCCA-204ENST00000413170 MYT1LQ9UL68 1186 aa21.61■■□□□ 1.05
PCCA-204ENST00000413170 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
PCCA-204ENST00000413170 C3P01024 1663 aa21.6■■□□□ 1.05
PCCA-204ENST00000413170 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
PCCA-204ENST00000413170 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
PCCA-204ENST00000413170 AFAP1Q8N556 730 aa21.57■■□□□ 1.04
PCCA-204ENST00000413170 MYO5CQ9NQX4 1742 aa21.57■■□□□ 1.04
PCCA-204ENST00000413170 DIP2CQ9Y2E4 1556 aa21.57■■□□□ 1.04
PCCA-204ENST00000413170 KDM5CP41229 1560 aa21.56■■□□□ 1.04
PCCA-204ENST00000413170 UBAP1LF5GYI3 381 aa21.55■■□□□ 1.04
PCCA-204ENST00000413170 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
PCCA-204ENST00000413170 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
PCCA-204ENST00000413170 ARHGAP5Q13017 1502 aa21.52■■□□□ 1.04
PCCA-204ENST00000413170 ABCA6Q8N139 1617 aa21.51■■□□□ 1.03
PCCA-204ENST00000413170 ATP1B4Q9UN42 357 aaPredicted RBP21.51■■□□□ 1.03
PCCA-204ENST00000413170 REREQ9P2R6 1566 aa21.51■■□□□ 1.03
PCCA-204ENST00000413170 ZNF335Q9H4Z2 1342 aaPredicted RBP21.51■■□□□ 1.03
PCCA-204ENST00000413170 KIF14Q15058 1648 aa21.51■■□□□ 1.03
PCCA-204ENST00000413170 CAMSAP1Q5T5Y3 1602 aa21.5■■□□□ 1.03
PCCA-204ENST00000413170 NCKAP5LQ9HCH0 1330 aa21.46■■□□□ 1.03
PCCA-204ENST00000413170 AGLP35573 1532 aa21.45■■□□□ 1.02
PCCA-204ENST00000413170 MLH3Q9UHC1 1453 aa21.44■■□□□ 1.02
PCCA-204ENST00000413170 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
PCCA-204ENST00000413170 MED1Q15648 1581 aaPredicted RBP21.41■■□□□ 1.02
PCCA-204ENST00000413170 CDK11AQ9UQ88 783 aaPredicted RBP21.41■■□□□ 1.02
PCCA-204ENST00000413170 TROQ12816 1431 aaPredicted RBP21.39■■□□□ 1.02
PCCA-204ENST00000413170 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
PCCA-204ENST00000413170 NPATQ14207 1427 aa21.38■■□□□ 1.01
PCCA-204ENST00000413170 CLIP1P30622 1438 aa21.37■■□□□ 1.01
PCCA-204ENST00000413170 ABCC1P33527 1531 aa21.36■■□□□ 1.01
PCCA-204ENST00000413170 HSPA1LP34931 641 aa21.36■■□□□ 1.01
PCCA-204ENST00000413170 EEA1Q15075 1411 aa21.36■■□□□ 1.01
PCCA-204ENST00000413170 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
PCCA-204ENST00000413170 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
PCCA-204ENST00000413170 PIP4K2BP78356 416 aa21.34■■□□□ 1.01
PCCA-204ENST00000413170 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
PCCA-204ENST00000413170 MROH2AA6NES4 1674 aa21.34■■□□□ 1.01
PCCA-204ENST00000413170 PKD2Q13563 968 aa21.33■■□□□ 1.01
PCCA-204ENST00000413170 ITSN2Q9NZM3 1697 aa21.33■■□□□ 1
PCCA-204ENST00000413170 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
PCCA-204ENST00000413170 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1
PCCA-204ENST00000413170 PLA2R1Q13018 1463 aa21.32■■□□□ 1
PCCA-204ENST00000413170 TCOF1Q13428 1488 aaKnown RBP21.31■■□□□ 1
PCCA-204ENST00000413170 ZNF142P52746 1687 aaPredicted RBP21.31■■□□□ 1
PCCA-204ENST00000413170 PREX2Q70Z35 1606 aa21.3■■□□□ 1
PCCA-204ENST00000413170 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
PCCA-204ENST00000413170 CEP170BQ9Y4F5 1589 aaPredicted RBP21.29■■□□□ 1
PCCA-204ENST00000413170 EHMT2Q96KQ7 1210 aa21.29■■□□□ 1
PCCA-204ENST00000413170 SUPT6HQ7KZ85 1726 aaKnown RBP21.29■■□□□ 1
PCCA-204ENST00000413170 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
PCCA-204ENST00000413170 ARHGAP35Q9NRY4 1499 aa21.26■□□□□ 0.99
PCCA-204ENST00000413170 LRRIQ1Q96JM4 1722 aa21.24■□□□□ 0.99
PCCA-204ENST00000413170 SAMD9LQ8IVG5 1584 aa21.24■□□□□ 0.99
PCCA-204ENST00000413170 PTPRKQ15262 1439 aa21.23■□□□□ 0.99
PCCA-204ENST00000413170 TOM1O60784 492 aa21.23■□□□□ 0.99
PCCA-204ENST00000413170 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
PCCA-204ENST00000413170 ZNF777Q9ULD5 760 aaPredicted RBP21.2■□□□□ 0.98
PCCA-204ENST00000413170 SPAG9O60271 1321 aaKnown RBP21.19■□□□□ 0.98
PCCA-204ENST00000413170 CPS1P31327 1500 aa21.18■□□□□ 0.98
PCCA-204ENST00000413170 SYCP2Q9BX26 1530 aa21.18■□□□□ 0.98
PCCA-204ENST00000413170 GGT6Q6P531 493 aa21.17■□□□□ 0.98
PCCA-204ENST00000413170 CDC42BPAQ5VT25 1732 aa21.16■□□□□ 0.98
PCCA-204ENST00000413170 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
PCCA-204ENST00000413170 PLXNC1O60486 1568 aa21.14■□□□□ 0.98
PCCA-204ENST00000413170 ATP7AQ04656 1500 aa21.14■□□□□ 0.98
PCCA-204ENST00000413170 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.98
PCCA-204ENST00000413170 DNMT1P26358 1616 aaKnown RBP21.14■□□□□ 0.97
PCCA-204ENST00000413170 A2MP01023 1474 aa21.13■□□□□ 0.97
PCCA-204ENST00000413170 HNRNPMP52272 730 aaKnown RBP eCLIP21.13■□□□□ 0.974e-6■■■□□ 15.5
PCCA-204ENST00000413170 NEURL4Q96JN8 1562 aa21.12■□□□□ 0.97
PCCA-204ENST00000413170 POLR1AO95602 1720 aaPredicted RBP21.11■□□□□ 0.97
PCCA-204ENST00000413170 CCDC18Q5T9S5 1454 aa21.1■□□□□ 0.97
PCCA-204ENST00000413170 INO80Q9ULG1 1556 aaPredicted RBP21.1■□□□□ 0.97
PCCA-204ENST00000413170 ALKQ9UM73 1620 aa21.09■□□□□ 0.97
PCCA-204ENST00000413170 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
PCCA-204ENST00000413170 CASKIN1Q8WXD9 1431 aa21.04■□□□□ 0.96
PCCA-204ENST00000413170 GPATCH8Q9UKJ3 1502 aaKnown RBP21.04■□□□□ 0.96
PCCA-204ENST00000413170 TNRQ92752 1358 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms