RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 NISCHQ9Y2I1 1504 aa32.84■■■□□ 2.85
PCCA-204ENST00000413170 ABCC9O60706 1549 aa30.57■■■□□ 2.48
PCCA-204ENST00000413170 CCDC180Q9P1Z9 1646 aa29.75■■■□□ 2.35
PCCA-204ENST00000413170 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
PCCA-204ENST00000413170 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
PCCA-204ENST00000413170 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
PCCA-204ENST00000413170 NACADO15069 1562 aa28.3■■■□□ 2.12
PCCA-204ENST00000413170 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
PCCA-204ENST00000413170 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
PCCA-204ENST00000413170 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
PCCA-204ENST00000413170 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
PCCA-204ENST00000413170 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
PCCA-204ENST00000413170 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
PCCA-204ENST00000413170 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
PCCA-204ENST00000413170 SHROOM4Q9ULL8 1493 aa27.39■■□□□ 1.98
PCCA-204ENST00000413170 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
PCCA-204ENST00000413170 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
PCCA-204ENST00000413170 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
PCCA-204ENST00000413170 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
PCCA-204ENST00000413170 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
PCCA-204ENST00000413170 CUX2O14529 1486 aa26.58■■□□□ 1.85
PCCA-204ENST00000413170 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
PCCA-204ENST00000413170 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
PCCA-204ENST00000413170 NCAPD3P42695 1498 aa26.14■■□□□ 1.78
PCCA-204ENST00000413170 NESP48681 1621 aa26.05■■□□□ 1.76
PCCA-204ENST00000413170 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
PCCA-204ENST00000413170 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
PCCA-204ENST00000413170 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
PCCA-204ENST00000413170 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
PCCA-204ENST00000413170 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
PCCA-204ENST00000413170 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
PCCA-204ENST00000413170 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
PCCA-204ENST00000413170 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
PCCA-204ENST00000413170 KIF21AQ7Z4S6 1674 aa25.65■■□□□ 1.7
PCCA-204ENST00000413170 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
PCCA-204ENST00000413170 BAZ1AQ9NRL2 1556 aaPredicted RBP25.54■■□□□ 1.68
PCCA-204ENST00000413170 PEG3Q9GZU2 1588 aa25.49■■□□□ 1.67
PCCA-204ENST00000413170 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
PCCA-204ENST00000413170 WDR62O43379 1518 aa25.37■■□□□ 1.65
PCCA-204ENST00000413170 CADPSQ9ULU8 1353 aa25.33■■□□□ 1.65
PCCA-204ENST00000413170 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
PCCA-204ENST00000413170 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
PCCA-204ENST00000413170 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
PCCA-204ENST00000413170 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
PCCA-204ENST00000413170 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
PCCA-204ENST00000413170 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
PCCA-204ENST00000413170 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
PCCA-204ENST00000413170 WIZO95785 1651 aa24.99■■□□□ 1.59
PCCA-204ENST00000413170 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
PCCA-204ENST00000413170 CFTRP13569 1480 aa24.89■■□□□ 1.58
PCCA-204ENST00000413170 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
PCCA-204ENST00000413170 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
PCCA-204ENST00000413170 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
PCCA-204ENST00000413170 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
PCCA-204ENST00000413170 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
PCCA-204ENST00000413170 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
PCCA-204ENST00000413170 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
PCCA-204ENST00000413170 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
PCCA-204ENST00000413170 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
PCCA-204ENST00000413170 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
PCCA-204ENST00000413170 TOPBP1Q92547 1522 aa24.52■■□□□ 1.52
PCCA-204ENST00000413170 CHD1O14646 1710 aa24.51■■□□□ 1.51
PCCA-204ENST00000413170 FBLN2P98095 1184 aa24.45■■□□□ 1.5
PCCA-204ENST00000413170 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
PCCA-204ENST00000413170 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
PCCA-204ENST00000413170 DNMBPQ6XZF7 1577 aa24.35■■□□□ 1.49
PCCA-204ENST00000413170 CCDC88BA6NC98 1476 aa24.35■■□□□ 1.49
PCCA-204ENST00000413170 TARBP1Q13395 1621 aaKnown RBP24.34■■□□□ 1.49
PCCA-204ENST00000413170 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
PCCA-204ENST00000413170 CLASP1Q7Z460 1538 aa24.2■■□□□ 1.47
PCCA-204ENST00000413170 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
PCCA-204ENST00000413170 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
PCCA-204ENST00000413170 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
PCCA-204ENST00000413170 SYNJ1O43426 1573 aa24.12■■□□□ 1.45
PCCA-204ENST00000413170 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
PCCA-204ENST00000413170 SOGA1O94964 1423 aa24.1■■□□□ 1.45
PCCA-204ENST00000413170 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
PCCA-204ENST00000413170 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
PCCA-204ENST00000413170 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
PCCA-204ENST00000413170 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
PCCA-204ENST00000413170 SYNJ2O15056 1496 aa23.97■■□□□ 1.43
PCCA-204ENST00000413170 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
PCCA-204ENST00000413170 CUX1P39880 1505 aa23.84■■□□□ 1.41
PCCA-204ENST00000413170 PBRM1Q86U86 1689 aa23.83■■□□□ 1.4
PCCA-204ENST00000413170 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
PCCA-204ENST00000413170 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
PCCA-204ENST00000413170 ABCA5Q8WWZ7 1642 aa23.68■■□□□ 1.38
PCCA-204ENST00000413170 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
PCCA-204ENST00000413170 KIF13AQ9H1H9 1805 aa23.66■■□□□ 1.38
PCCA-204ENST00000413170 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
PCCA-204ENST00000413170 NUP160Q12769 1436 aa23.6■■□□□ 1.37
PCCA-204ENST00000413170 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
PCCA-204ENST00000413170 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
PCCA-204ENST00000413170 ILDR1Q86SU0 546 aaPredicted RBP23.55■■□□□ 1.36
PCCA-204ENST00000413170 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
PCCA-204ENST00000413170 FAM69CQ0P6D2 419 aa23.51■■□□□ 1.35
PCCA-204ENST00000413170 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
PCCA-204ENST00000413170 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
PCCA-204ENST00000413170 ABCC10Q5T3U5 1492 aa23.46■■□□□ 1.35
PCCA-204ENST00000413170 FHAD1B1AJZ9 1412 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms