RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
CPSF4-202ENST00000412686 NEO1Q92859 1461 aa12.21□□□□□ -0.45
CPSF4-202ENST00000412686 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
CPSF4-202ENST00000412686 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
CPSF4-202ENST00000412686 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
CPSF4-202ENST00000412686 LRRC9Q6ZRR7 1453 aa12.2□□□□□ -0.46
CPSF4-202ENST00000412686 AKNAQ7Z591 1439 aa12.2□□□□□ -0.46
CPSF4-202ENST00000412686 FRMPD1Q5SYB0 1578 aa12.19□□□□□ -0.46
CPSF4-202ENST00000412686 ARAP3Q8WWN8 1544 aa12.19□□□□□ -0.46
CPSF4-202ENST00000412686 MAP3K1Q13233 1512 aa12.18□□□□□ -0.46
CPSF4-202ENST00000412686 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
CPSF4-202ENST00000412686 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
CPSF4-202ENST00000412686 NCOA2Q15596 1464 aa12.17□□□□□ -0.46
CPSF4-202ENST00000412686 RAPGEF3O95398 923 aa12.17□□□□□ -0.46
CPSF4-202ENST00000412686 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
CPSF4-202ENST00000412686 RICTORQ6R327 1708 aa12.17□□□□□ -0.46
CPSF4-202ENST00000412686 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
CPSF4-202ENST00000412686 ADGRL1O94910 1474 aa12.16□□□□□ -0.46
CPSF4-202ENST00000412686 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
CPSF4-202ENST00000412686 EFCAB2Q5VUJ9 269 aa12.15□□□□□ -0.46
CPSF4-202ENST00000412686 PHLDB1Q86UU1 1377 aa12.15□□□□□ -0.46
CPSF4-202ENST00000412686 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
CPSF4-202ENST00000412686 DENND4BO75064 1496 aaPredicted RBP12.14□□□□□ -0.47
CPSF4-202ENST00000412686 SCAPERQ9BY12 1400 aa12.14□□□□□ -0.47
CPSF4-202ENST00000412686 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
CPSF4-202ENST00000412686 ABCC1P33527 1531 aa12.14□□□□□ -0.47
CPSF4-202ENST00000412686 ARHGEF12Q9NZN5 1544 aa12.13□□□□□ -0.47
CPSF4-202ENST00000412686 APLP2Q06481 763 aa12.13□□□□□ -0.47
CPSF4-202ENST00000412686 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
CPSF4-202ENST00000412686 POGZQ7Z3K3 1410 aa12.11□□□□□ -0.47
CPSF4-202ENST00000412686 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
CPSF4-202ENST00000412686 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-202ENST00000412686 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-202ENST00000412686 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
CPSF4-202ENST00000412686 ZMYM4Q5VZL5 1548 aa12.09□□□□□ -0.47
CPSF4-202ENST00000412686 PPARGC1BQ86YN6 1023 aaKnown RBP12.08□□□□□ -0.48
CPSF4-202ENST00000412686 AFAP1Q8N556 730 aa12.08□□□□□ -0.48
CPSF4-202ENST00000412686 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
CPSF4-202ENST00000412686 KDM5CP41229 1560 aa12.08□□□□□ -0.48
CPSF4-202ENST00000412686 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
CPSF4-202ENST00000412686 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
CPSF4-202ENST00000412686 ZFYVE16Q7Z3T8 1539 aa12.06□□□□□ -0.48
CPSF4-202ENST00000412686 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
CPSF4-202ENST00000412686 MYOM3Q5VTT5 1437 aa12.06□□□□□ -0.48
CPSF4-202ENST00000412686 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
CPSF4-202ENST00000412686 ZNF518AQ6AHZ1 1483 aa12.06□□□□□ -0.48
CPSF4-202ENST00000412686 HECW2Q9P2P5 1572 aa12.05□□□□□ -0.48
CPSF4-202ENST00000412686 MBD5Q9P267 1494 aa12.04□□□□□ -0.48
CPSF4-202ENST00000412686 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
CPSF4-202ENST00000412686 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
CPSF4-202ENST00000412686 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
CPSF4-202ENST00000412686 KIDINS220Q9ULH0 1771 aa12.03□□□□□ -0.48
CPSF4-202ENST00000412686 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
CPSF4-202ENST00000412686 DIP2CQ9Y2E4 1556 aa12.02□□□□□ -0.49
CPSF4-202ENST00000412686 PTPN23Q9H3S7 1636 aa12.02□□□□□ -0.49
CPSF4-202ENST00000412686 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
CPSF4-202ENST00000412686 MYT1LQ9UL68 1186 aa12.01□□□□□ -0.49
CPSF4-202ENST00000412686 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
CPSF4-202ENST00000412686 MLH3Q9UHC1 1453 aa12.01□□□□□ -0.49
CPSF4-202ENST00000412686 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-202ENST00000412686 KDM4FA0A1W2PPD8 638 aa12□□□□□ -0.49
CPSF4-202ENST00000412686 FGD6Q6ZV73 1430 aa12□□□□□ -0.49
CPSF4-202ENST00000412686 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
CPSF4-202ENST00000412686 ATP7AQ04656 1500 aa11.99□□□□□ -0.49
CPSF4-202ENST00000412686 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
CPSF4-202ENST00000412686 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
CPSF4-202ENST00000412686 SPAG9O60271 1321 aaKnown RBP11.98□□□□□ -0.49
CPSF4-202ENST00000412686 ATP10AO60312 1499 aa11.97□□□□□ -0.49
CPSF4-202ENST00000412686 TCOF1Q13428 1488 aaKnown RBP11.97□□□□□ -0.49
CPSF4-202ENST00000412686 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CPSF4-202ENST00000412686 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
CPSF4-202ENST00000412686 CROCC2H7BZ55 1655 aa11.95□□□□□ -0.5
CPSF4-202ENST00000412686 ADGBQ8N7X0 1667 aa11.95□□□□□ -0.5
CPSF4-202ENST00000412686 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
CPSF4-202ENST00000412686 DNMT1P26358 1616 aaKnown RBP11.94□□□□□ -0.5
CPSF4-202ENST00000412686 REREQ9P2R6 1566 aa11.94□□□□□ -0.5
CPSF4-202ENST00000412686 MLECQ14165 292 aa11.94□□□□□ -0.5
CPSF4-202ENST00000412686 ABCC5O15440 1437 aa11.94□□□□□ -0.5
CPSF4-202ENST00000412686 MADDQ8WXG6 1647 aa11.93□□□□□ -0.5
CPSF4-202ENST00000412686 DAPK1P53355 1430 aa11.93□□□□□ -0.5
CPSF4-202ENST00000412686 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
CPSF4-202ENST00000412686 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
CPSF4-202ENST00000412686 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
CPSF4-202ENST00000412686 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
CPSF4-202ENST00000412686 RTEL1-TNFRSF6BF6WH68 1400 aa11.92□□□□□ -0.5
CPSF4-202ENST00000412686 A2MP01023 1474 aa11.91□□□□□ -0.5
CPSF4-202ENST00000412686 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
CPSF4-202ENST00000412686 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
CPSF4-202ENST00000412686 AGLP35573 1532 aa11.9□□□□□ -0.5
CPSF4-202ENST00000412686 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.51
CPSF4-202ENST00000412686 TSPY4P0CV99 314 aa11.89□□□□□ -0.51
CPSF4-202ENST00000412686 TSPY10P0CW01 314 aa11.89□□□□□ -0.51
CPSF4-202ENST00000412686 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
CPSF4-202ENST00000412686 PTPRKQ15262 1439 aa11.87□□□□□ -0.51
CPSF4-202ENST00000412686 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
CPSF4-202ENST00000412686 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
CPSF4-202ENST00000412686 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
CPSF4-202ENST00000412686 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
CPSF4-202ENST00000412686 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
CPSF4-202ENST00000412686 PTPRMP28827 1452 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms