RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 TRIM52Q96A61 297 aa23.55■■□□□ 1.36
HCG18-233ENST00000412685 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
HCG18-233ENST00000412685 ADCY10Q96PN6 1610 aa23.52■■□□□ 1.36
HCG18-233ENST00000412685 ITSN2Q9NZM3 1697 aa23.5■■□□□ 1.35
HCG18-233ENST00000412685 ABCA8O94911 1581 aa23.5■■□□□ 1.35
HCG18-233ENST00000412685 KIF14Q15058 1648 aa23.5■■□□□ 1.35
HCG18-233ENST00000412685 GPATCH8Q9UKJ3 1502 aaKnown RBP23.49■■□□□ 1.35
HCG18-233ENST00000412685 CFDP1Q9UEE9 299 aaPredicted RBP23.48■■□□□ 1.35
HCG18-233ENST00000412685 CAMSAP2Q08AD1 1489 aa23.48■■□□□ 1.35
HCG18-233ENST00000412685 MPHOSPH9Q99550 1183 aa23.48■■□□□ 1.35
HCG18-233ENST00000412685 KDM5BQ9UGL1 1544 aa23.48■■□□□ 1.35
HCG18-233ENST00000412685 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
HCG18-233ENST00000412685 HIRIP3Q9BW71 556 aaPredicted RBP23.44■■□□□ 1.34
HCG18-233ENST00000412685 ATP10BO94823 1461 aa23.42■■□□□ 1.34
HCG18-233ENST00000412685 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
HCG18-233ENST00000412685 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.33
HCG18-233ENST00000412685 PTPRGP23470 1445 aa23.37■■□□□ 1.33
HCG18-233ENST00000412685 NCOA1Q15788 1441 aa23.37■■□□□ 1.33
HCG18-233ENST00000412685 FOXD1Q16676 465 aa23.36■■□□□ 1.33
HCG18-233ENST00000412685 ADGBQ8N7X0 1667 aa23.36■■□□□ 1.33
HCG18-233ENST00000412685 CHD1O14646 1710 aa23.36■■□□□ 1.33
HCG18-233ENST00000412685 ABCC10Q5T3U5 1492 aa23.36■■□□□ 1.33
HCG18-233ENST00000412685 CROCC2H7BZ55 1655 aa23.35■■□□□ 1.33
HCG18-233ENST00000412685 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
HCG18-233ENST00000412685 CDC42BPAQ5VT25 1732 aa23.34■■□□□ 1.33
HCG18-233ENST00000412685 ANKRD30BQ9BXX2 1392 aa23.34■■□□□ 1.33
HCG18-233ENST00000412685 SLC4A1APQ9BWU0 796 aaKnown RBP23.31■■□□□ 1.32
HCG18-233ENST00000412685 KCNH8Q96L42 1107 aa23.3■■□□□ 1.32
HCG18-233ENST00000412685 RPRD2Q5VT52 1461 aaKnown RBP23.29■■□□□ 1.32
HCG18-233ENST00000412685 ANKRD30AQ9BXX3 1397 aa23.29■■□□□ 1.32
HCG18-233ENST00000412685 L3MBTL2Q969R5 705 aa23.29■■□□□ 1.32
HCG18-233ENST00000412685 PZPP20742 1482 aa23.28■■□□□ 1.32
HCG18-233ENST00000412685 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
HCG18-233ENST00000412685 SHANK2Q9UPX8 1470 aa23.25■■□□□ 1.31
HCG18-233ENST00000412685 TEX14Q8IWB6 1497 aa23.22■■□□□ 1.31
HCG18-233ENST00000412685 C9orf84Q5VXU9 1444 aa23.21■■□□□ 1.31
HCG18-233ENST00000412685 ANKRD50Q9ULJ7 1429 aa23.21■■□□□ 1.31
HCG18-233ENST00000412685 ANP32CO43423 234 aa23.21■■□□□ 1.31
HCG18-233ENST00000412685 HSPA5P11021 654 aaKnown RBP23.2■■□□□ 1.3
HCG18-233ENST00000412685 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
HCG18-233ENST00000412685 CCER2I3L3R5 266 aa23.17■■□□□ 1.3
HCG18-233ENST00000412685 KIAA1107Q9UPP5 1409 aa23.17■■□□□ 1.3
HCG18-233ENST00000412685 ARHGEF5Q12774 1597 aa23.16■■□□□ 1.3
HCG18-233ENST00000412685 TSPY4P0CV99 314 aa23.16■■□□□ 1.3
HCG18-233ENST00000412685 TSPY10P0CW01 314 aa23.16■■□□□ 1.3
HCG18-233ENST00000412685 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
HCG18-233ENST00000412685 PREX2Q70Z35 1606 aa23.15■■□□□ 1.3
HCG18-233ENST00000412685 MBD5Q9P267 1494 aa23.14■■□□□ 1.3
HCG18-233ENST00000412685 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.292e-7■□□□□ 10.1
HCG18-233ENST00000412685 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
HCG18-233ENST00000412685 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
HCG18-233ENST00000412685 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
HCG18-233ENST00000412685 PKD2Q13563 968 aa23.12■■□□□ 1.29
HCG18-233ENST00000412685 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
HCG18-233ENST00000412685 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
HCG18-233ENST00000412685 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
HCG18-233ENST00000412685 CCDC141Q6ZP82 1450 aa23.09■■□□□ 1.29
HCG18-233ENST00000412685 NUP155O75694 1391 aa23.09■■□□□ 1.29
HCG18-233ENST00000412685 TTC37Q6PGP7 1564 aa23.07■■□□□ 1.28
HCG18-233ENST00000412685 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
HCG18-233ENST00000412685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.05■■□□□ 1.28
HCG18-233ENST00000412685 RSPH4AQ5TD94 716 aa23.05■■□□□ 1.28
HCG18-233ENST00000412685 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
HCG18-233ENST00000412685 ARHGAP5Q13017 1502 aa23.03■■□□□ 1.28
HCG18-233ENST00000412685 SYCP2Q9BX26 1530 aa23.02■■□□□ 1.28
HCG18-233ENST00000412685 SPATA31E1Q6ZUB1 1445 aa23.02■■□□□ 1.27
HCG18-233ENST00000412685 CCDC7Q96M83 1385 aa23■■□□□ 1.27
HCG18-233ENST00000412685 C11orf95C9JLR9 678 aaPredicted RBP22.99■■□□□ 1.27
HCG18-233ENST00000412685 CNTLNQ9NXG0 1405 aa22.98■■□□□ 1.27
HCG18-233ENST00000412685 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
HCG18-233ENST00000412685 MAST1Q9Y2H9 1570 aa22.96■■□□□ 1.27
HCG18-233ENST00000412685 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
HCG18-233ENST00000412685 SUPT16HQ9Y5B9 1047 aaKnown RBP22.96■■□□□ 1.27
HCG18-233ENST00000412685 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
HCG18-233ENST00000412685 PLEKHH2Q8IVE3 1493 aa22.95■■□□□ 1.26
HCG18-233ENST00000412685 FAM135AQ9P2D6 1515 aa22.92■■□□□ 1.26
HCG18-233ENST00000412685 MYT1Q01538 1121 aa22.91■■□□□ 1.26
HCG18-233ENST00000412685 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
HCG18-233ENST00000412685 POLR1AO95602 1720 aaPredicted RBP22.91■■□□□ 1.26
HCG18-233ENST00000412685 ARHGEF12Q9NZN5 1544 aa22.91■■□□□ 1.26
HCG18-233ENST00000412685 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
HCG18-233ENST00000412685 UHRF1BP1Q6BDS2 1440 aa22.9■■□□□ 1.26
HCG18-233ENST00000412685 PLCH2O75038 1416 aa22.89■■□□□ 1.26
HCG18-233ENST00000412685 PLXNC1O60486 1568 aa22.88■■□□□ 1.25
HCG18-233ENST00000412685 USP47Q96K76 1375 aa22.87■■□□□ 1.25
HCG18-233ENST00000412685 UNC13BO14795 1591 aa22.86■■□□□ 1.25
HCG18-233ENST00000412685 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
HCG18-233ENST00000412685 EFCAB2Q5VUJ9 269 aa22.84■■□□□ 1.25
HCG18-233ENST00000412685 KDM5CP41229 1560 aa22.83■■□□□ 1.25
HCG18-233ENST00000412685 PRKRIP1Q9H875 184 aaPredicted RBP22.82■■□□□ 1.24
HCG18-233ENST00000412685 DUOX2Q9NRD8 1548 aa22.81■■□□□ 1.24
HCG18-233ENST00000412685 ABCC1P33527 1531 aa22.8■■□□□ 1.24
HCG18-233ENST00000412685 BCORL1Q5H9F3 1711 aa22.79■■□□□ 1.24
HCG18-233ENST00000412685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.242e-6■■□□□ 11.6
HCG18-233ENST00000412685 DCAF11Q8TEB1 546 aa22.78■■□□□ 1.24
HCG18-233ENST00000412685 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
HCG18-233ENST00000412685 CCDC144AA2RUR9 1427 aa22.78■■□□□ 1.24
HCG18-233ENST00000412685 IQGAP3Q86VI3 1631 aa22.78■■□□□ 1.24
HCG18-233ENST00000412685 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
HCG18-233ENST00000412685 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms