RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 HSP90AA1P07900 732 aaKnown RBP15.7■□□□□ 0.1
ABCA13-201ENST00000411975 RRBP1Q9P2E9 1410 aaKnown RBP15.69■□□□□ 0.1
ABCA13-201ENST00000411975 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
ABCA13-201ENST00000411975 TNNT2P45379 298 aaPredicted RBP15.68■□□□□ 0.1
ABCA13-201ENST00000411975 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
ABCA13-201ENST00000411975 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
ABCA13-201ENST00000411975 SPAG9O60271 1321 aaKnown RBP15.68■□□□□ 0.1
ABCA13-201ENST00000411975 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
ABCA13-201ENST00000411975 TOPBP1Q92547 1522 aa15.67■□□□□ 0.1
ABCA13-201ENST00000411975 NBR1Q14596 966 aa15.67■□□□□ 0.1
ABCA13-201ENST00000411975 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
ABCA13-201ENST00000411975 KIF3BO15066 747 aa15.66■□□□□ 0.1
ABCA13-201ENST00000411975 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
ABCA13-201ENST00000411975 POLA1P09884 1462 aaPredicted RBP15.66■□□□□ 0.1
ABCA13-201ENST00000411975 RALBP1Q15311 655 aa15.65■□□□□ 0.1
ABCA13-201ENST00000411975 NCOA2Q15596 1464 aa15.64■□□□□ 0.09
ABCA13-201ENST00000411975 UACAQ9BZF9 1416 aa15.64■□□□□ 0.09
ABCA13-201ENST00000411975 GRIN2BQ13224 1484 aa15.64■□□□□ 0.09
ABCA13-201ENST00000411975 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
ABCA13-201ENST00000411975 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
ABCA13-201ENST00000411975 ZNF644Q9H582 1327 aaPredicted RBP15.62■□□□□ 0.09
ABCA13-201ENST00000411975 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
ABCA13-201ENST00000411975 EFCAB5A4FU69 1503 aa15.62■□□□□ 0.09
ABCA13-201ENST00000411975 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
ABCA13-201ENST00000411975 C14orf37Q86TY3 774 aa15.6■□□□□ 0.09
ABCA13-201ENST00000411975 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
ABCA13-201ENST00000411975 SRPK2P78362 688 aaKnown RBP15.59■□□□□ 0.09
ABCA13-201ENST00000411975 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
ABCA13-201ENST00000411975 ST20-MTHFSA0A0A6YYL1 179 aa15.59■□□□□ 0.09
ABCA13-201ENST00000411975 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
ABCA13-201ENST00000411975 FTSJ3Q8IY81 847 aaKnown RBP15.59■□□□□ 0.09
ABCA13-201ENST00000411975 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.08
ABCA13-201ENST00000411975 MLECQ14165 292 aa15.58■□□□□ 0.08
ABCA13-201ENST00000411975 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
ABCA13-201ENST00000411975 FRAT1Q92837 279 aaPredicted RBP15.57■□□□□ 0.08
ABCA13-201ENST00000411975 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
ABCA13-201ENST00000411975 NLRP13Q86W25 1043 aa15.57■□□□□ 0.08
ABCA13-201ENST00000411975 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
ABCA13-201ENST00000411975 TIAM1Q13009 1591 aa15.55■□□□□ 0.08
ABCA13-201ENST00000411975 EIF3AQ14152 1382 aaKnown RBP15.55■□□□□ 0.08
ABCA13-201ENST00000411975 USP47Q96K76 1375 aa15.55■□□□□ 0.08
ABCA13-201ENST00000411975 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
ABCA13-201ENST00000411975 STK26Q9P289 416 aa15.54■□□□□ 0.08
ABCA13-201ENST00000411975 PRDM2Q13029 1718 aa15.53■□□□□ 0.08
ABCA13-201ENST00000411975 ZBTB7CA1YPR0 619 aa15.53■□□□□ 0.08
ABCA13-201ENST00000411975 RGS3P49796 1198 aa15.53■□□□□ 0.08
ABCA13-201ENST00000411975 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
ABCA13-201ENST00000411975 HDGFP51858 240 aaKnown RBP15.53■□□□□ 0.08
ABCA13-201ENST00000411975 ANP32EQ9BTT0 268 aa15.53■□□□□ 0.08
ABCA13-201ENST00000411975 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
ABCA13-201ENST00000411975 RCAN3Q9UKA8 241 aa15.52■□□□□ 0.08
ABCA13-201ENST00000411975 BECN1Q14457 450 aa15.52■□□□□ 0.07
ABCA13-201ENST00000411975 UNC13AQ9UPW8 1703 aa15.52■□□□□ 0.07
ABCA13-201ENST00000411975 ABCA10Q8WWZ4 1543 aa15.51■□□□□ 0.07
ABCA13-201ENST00000411975 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
ABCA13-201ENST00000411975 PNNQ9H307 717 aaKnown RBP15.51■□□□□ 0.07
ABCA13-201ENST00000411975 WASHC2CQ9Y4E1 1318 aa15.51■□□□□ 0.07
ABCA13-201ENST00000411975 IFT140Q96RY7 1462 aa15.5■□□□□ 0.07
ABCA13-201ENST00000411975 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
ABCA13-201ENST00000411975 MS4A1P11836 297 aa15.49■□□□□ 0.07
ABCA13-201ENST00000411975 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
ABCA13-201ENST00000411975 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
ABCA13-201ENST00000411975 ANP32BQ92688 251 aaKnown RBP15.48■□□□□ 0.07
ABCA13-201ENST00000411975 MYBBP1AQ9BQG0 1328 aaKnown RBP15.47■□□□□ 0.07
ABCA13-201ENST00000411975 HDGFL2Q7Z4V5 671 aaPredicted RBP15.46■□□□□ 0.07
ABCA13-201ENST00000411975 HFM1A2PYH4 1435 aa15.46■□□□□ 0.07
ABCA13-201ENST00000411975 MIA2Q96PC5 1412 aa15.46■□□□□ 0.06
ABCA13-201ENST00000411975 PDE3BQ13370 1112 aa15.45■□□□□ 0.06
ABCA13-201ENST00000411975 PANK3Q9H999 370 aa15.45■□□□□ 0.06
ABCA13-201ENST00000411975 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
ABCA13-201ENST00000411975 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
ABCA13-201ENST00000411975 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
ABCA13-201ENST00000411975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.43■□□□□ 0.06
ABCA13-201ENST00000411975 NOP58Q9Y2X3 529 aaKnown RBP15.43■□□□□ 0.06
ABCA13-201ENST00000411975 CHMP4BQ9H444 224 aaKnown RBP15.43■□□□□ 0.06
ABCA13-201ENST00000411975 KIF7Q2M1P5 1343 aa15.42■□□□□ 0.06
ABCA13-201ENST00000411975 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
ABCA13-201ENST00000411975 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
ABCA13-201ENST00000411975 TRAK1Q9UPV9 953 aa15.42■□□□□ 0.06
ABCA13-201ENST00000411975 ZBED9Q6R2W3 1325 aa15.42■□□□□ 0.06
ABCA13-201ENST00000411975 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
ABCA13-201ENST00000411975 NUTM2DQ5VT03 806 aaPredicted RBP15.41■□□□□ 0.06
ABCA13-201ENST00000411975 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
ABCA13-201ENST00000411975 SNAPC4Q5SXM2 1469 aa15.41■□□□□ 0.06
ABCA13-201ENST00000411975 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
ABCA13-201ENST00000411975 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
ABCA13-201ENST00000411975 PRG4Q92954 1404 aaPredicted RBP15.4■□□□□ 0.06
ABCA13-201ENST00000411975 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
ABCA13-201ENST00000411975 WASHC2AQ641Q2 1341 aa15.39■□□□□ 0.05
ABCA13-201ENST00000411975 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
ABCA13-201ENST00000411975 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
ABCA13-201ENST00000411975 SOX12O15370 315 aa15.38■□□□□ 0.05
ABCA13-201ENST00000411975 ARXQ96QS3 562 aa15.38■□□□□ 0.05
ABCA13-201ENST00000411975 TERF2IPQ9NYB0 399 aa15.38■□□□□ 0.05
ABCA13-201ENST00000411975 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
ABCA13-201ENST00000411975 PCF11O94913 1555 aaKnown RBP15.38■□□□□ 0.05
ABCA13-201ENST00000411975 CNTLNQ9NXG0 1405 aa15.37■□□□□ 0.05
ABCA13-201ENST00000411975 KIAA0586Q9BVV6 1533 aa15.37■□□□□ 0.05
ABCA13-201ENST00000411975 MAP3K1Q13233 1512 aa15.37■□□□□ 0.05
ABCA13-201ENST00000411975 CUL7Q14999 1698 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms