RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 SCAPERQ9BY12 1400 aa28.87■■■□□ 2.21
RFC4-203ENST00000411792 EHBP1L1Q8N3D4 1523 aa28.86■■■□□ 2.21
RFC4-203ENST00000411792 PREX2Q70Z35 1606 aa28.84■■■□□ 2.21
RFC4-203ENST00000411792 RICTORQ6R327 1708 aa28.83■■■□□ 2.21
RFC4-203ENST00000411792 ARID4BQ4LE39 1312 aaPredicted RBP28.82■■■□□ 2.2
RFC4-203ENST00000411792 POGZQ7Z3K3 1410 aa28.81■■■□□ 2.2
RFC4-203ENST00000411792 CCNB3Q8WWL7 1395 aa28.81■■■□□ 2.2
RFC4-203ENST00000411792 TIAM1Q13009 1591 aa28.79■■■□□ 2.2
RFC4-203ENST00000411792 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
RFC4-203ENST00000411792 APLP2Q06481 763 aa28.77■■■□□ 2.2
RFC4-203ENST00000411792 ZMYM4Q5VZL5 1548 aa28.76■■■□□ 2.19
RFC4-203ENST00000411792 GPATCH8Q9UKJ3 1502 aaKnown RBP28.76■■■□□ 2.19
RFC4-203ENST00000411792 ZNF777Q9ULD5 760 aaPredicted RBP28.76■■■□□ 2.19
RFC4-203ENST00000411792 CDC42BPAQ5VT25 1732 aa28.75■■■□□ 2.19
RFC4-203ENST00000411792 CFDP1Q9UEE9 299 aaPredicted RBP28.75■■■□□ 2.19
RFC4-203ENST00000411792 ZNF518AQ6AHZ1 1483 aa28.74■■■□□ 2.19
RFC4-203ENST00000411792 ARHGEF40Q8TER5 1519 aa28.74■■■□□ 2.19
RFC4-203ENST00000411792 MAGI2Q86UL8 1455 aa28.73■■■□□ 2.19
RFC4-203ENST00000411792 MYT1LQ9UL68 1186 aa28.72■■■□□ 2.19
RFC4-203ENST00000411792 ZFYVE16Q7Z3T8 1539 aa28.72■■■□□ 2.19
RFC4-203ENST00000411792 ABCC1P33527 1531 aa28.7■■■□□ 2.19
RFC4-203ENST00000411792 MAP3K1Q13233 1512 aa28.7■■■□□ 2.19
RFC4-203ENST00000411792 SUPT6HQ7KZ85 1726 aaKnown RBP28.69■■■□□ 2.18
RFC4-203ENST00000411792 YEATS2Q9ULM3 1422 aa28.69■■■□□ 2.18
RFC4-203ENST00000411792 LRRC9Q6ZRR7 1453 aa28.68■■■□□ 2.18
RFC4-203ENST00000411792 AFAP1Q8N556 730 aa28.67■■■□□ 2.18
RFC4-203ENST00000411792 NCOA2Q15596 1464 aa28.66■■■□□ 2.18
RFC4-203ENST00000411792 PLEKHH2Q8IVE3 1493 aa28.66■■■□□ 2.18
RFC4-203ENST00000411792 ITSN2Q9NZM3 1697 aa28.65■■■□□ 2.18
RFC4-203ENST00000411792 SAMD9LQ8IVG5 1584 aa28.63■■■□□ 2.17
RFC4-203ENST00000411792 KDM5CP41229 1560 aa28.62■■■□□ 2.17
RFC4-203ENST00000411792 ARHGEF12Q9NZN5 1544 aa28.62■■■□□ 2.17
RFC4-203ENST00000411792 TRAPPC8Q9Y2L5 1435 aa28.61■■■□□ 2.17
RFC4-203ENST00000411792 BCORL1Q5H9F3 1711 aa28.61■■■□□ 2.17
RFC4-203ENST00000411792 SYCP2Q9BX26 1530 aa28.6■■■□□ 2.17
RFC4-203ENST00000411792 KIAA1107Q9UPP5 1409 aa28.6■■■□□ 2.17
RFC4-203ENST00000411792 HECW2Q9P2P5 1572 aa28.59■■■□□ 2.17
RFC4-203ENST00000411792 ADAMTSL3P82987 1691 aa28.59■■■□□ 2.17
RFC4-203ENST00000411792 KANK4Q5T7N3 995 aaPredicted RBP28.59■■■□□ 2.17
RFC4-203ENST00000411792 HNRNPMP52272 730 aaKnown RBP eCLIP28.58■■■□□ 2.17
RFC4-203ENST00000411792 MLECQ14165 292 aa28.57■■■□□ 2.16
RFC4-203ENST00000411792 ATP10AO60312 1499 aa28.57■■■□□ 2.16
RFC4-203ENST00000411792 MLH3Q9UHC1 1453 aa28.55■■■□□ 2.16
RFC4-203ENST00000411792 C9orf84Q5VXU9 1444 aa28.55■■■□□ 2.16
RFC4-203ENST00000411792 MADDQ8WXG6 1647 aa28.54■■■□□ 2.16
RFC4-203ENST00000411792 PTPRMP28827 1452 aa28.53■■■□□ 2.16
RFC4-203ENST00000411792 SPAG9O60271 1321 aaKnown RBP28.51■■■□□ 2.15
RFC4-203ENST00000411792 ZNF644Q9H582 1327 aaPredicted RBP28.51■■■□□ 2.15
RFC4-203ENST00000411792 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
RFC4-203ENST00000411792 PLPPR3Q6T4P5 718 aa28.5■■■□□ 2.15
RFC4-203ENST00000411792 RIMS1Q86UR5 1692 aaKnown RBP28.48■■■□□ 2.15
RFC4-203ENST00000411792 DIP2CQ9Y2E4 1556 aa28.46■■■□□ 2.15
RFC4-203ENST00000411792 CAMSAP2Q08AD1 1489 aa28.46■■■□□ 2.15
RFC4-203ENST00000411792 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
RFC4-203ENST00000411792 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
RFC4-203ENST00000411792 RSPH4AQ5TD94 716 aa28.42■■■□□ 2.14
RFC4-203ENST00000411792 MBD5Q9P267 1494 aa28.41■■■□□ 2.14
RFC4-203ENST00000411792 ATP7AQ04656 1500 aa28.41■■■□□ 2.14
RFC4-203ENST00000411792 KIDINS220Q9ULH0 1771 aa28.41■■■□□ 2.14
RFC4-203ENST00000411792 MIA2Q96PC5 1412 aa28.41■■■□□ 2.14
RFC4-203ENST00000411792 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
RFC4-203ENST00000411792 CCDC141Q6ZP82 1450 aa28.39■■■□□ 2.13
RFC4-203ENST00000411792 FER1L4A9Z1Z3 1794 aa28.38■■■□□ 2.13
RFC4-203ENST00000411792 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
RFC4-203ENST00000411792 TSPY4P0CV99 314 aa28.33■■■□□ 2.13
RFC4-203ENST00000411792 TSPY10P0CW01 314 aa28.33■■■□□ 2.13
RFC4-203ENST00000411792 RTEL1-TNFRSF6BF6WH68 1400 aa28.33■■■□□ 2.13
RFC4-203ENST00000411792 AGLP35573 1532 aa28.33■■■□□ 2.13
RFC4-203ENST00000411792 ARHGEF5Q12774 1597 aa28.32■■■□□ 2.12
RFC4-203ENST00000411792 ESF1Q9H501 851 aaKnown RBP28.31■■■□□ 2.12
RFC4-203ENST00000411792 A2MP01023 1474 aa28.29■■■□□ 2.12
RFC4-203ENST00000411792 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
RFC4-203ENST00000411792 PTPN23Q9H3S7 1636 aa28.23■■■□□ 2.11
RFC4-203ENST00000411792 CEBPAP49715 358 aaPredicted RBP28.23■■■□□ 2.11
RFC4-203ENST00000411792 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
RFC4-203ENST00000411792 PLXNC1O60486 1568 aa28.21■■■□□ 2.11
RFC4-203ENST00000411792 DHX29Q7Z478 1369 aaKnown RBP28.18■■■□□ 2.1
RFC4-203ENST00000411792 TCOF1Q13428 1488 aaKnown RBP28.16■■■□□ 2.1
RFC4-203ENST00000411792 LMTK3Q96Q04 1460 aa28.16■■■□□ 2.1
RFC4-203ENST00000411792 CNTLNQ9NXG0 1405 aa28.15■■■□□ 2.1
RFC4-203ENST00000411792 MAST1Q9Y2H9 1570 aa28.15■■■□□ 2.1
RFC4-203ENST00000411792 GGT6Q6P531 493 aa28.14■■■□□ 2.1
RFC4-203ENST00000411792 HSPA2P54652 639 aa28.13■■■□□ 2.09
RFC4-203ENST00000411792 FAM50AQ14320 339 aaKnown RBP28.13■■■□□ 2.09
RFC4-203ENST00000411792 ABCC5O15440 1437 aa28.11■■■□□ 2.09
RFC4-203ENST00000411792 DAPK1P53355 1430 aa28.1■■■□□ 2.09
RFC4-203ENST00000411792 SHANK2Q9UPX8 1470 aa28.1■■■□□ 2.09
RFC4-203ENST00000411792 KIF3BO15066 747 aa28.1■■■□□ 2.09
RFC4-203ENST00000411792 PPARGC1BQ86YN6 1023 aaKnown RBP28.1■■■□□ 2.09
RFC4-203ENST00000411792 PPP6R1Q9UPN7 881 aa28.08■■■□□ 2.09
RFC4-203ENST00000411792 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
RFC4-203ENST00000411792 C3P01024 1663 aa28.07■■■□□ 2.08
RFC4-203ENST00000411792 CROCC2H7BZ55 1655 aa28.05■■■□□ 2.08
RFC4-203ENST00000411792 PREX1Q8TCU6 1659 aa28.04■■■□□ 2.08
RFC4-203ENST00000411792 UHRF1BP1Q6BDS2 1440 aa28.01■■■□□ 2.08
RFC4-203ENST00000411792 KIF15Q9NS87 1388 aa28.01■■■□□ 2.07
RFC4-203ENST00000411792 SETD1BQ9UPS6 1966 aaKnown RBP28.01■■■□□ 2.07
RFC4-203ENST00000411792 DUOX2Q9NRD8 1548 aa28.01■■■□□ 2.07
RFC4-203ENST00000411792 CLTCQ00610 1675 aaKnown RBP28■■■□□ 2.07
RFC4-203ENST00000411792 ZMYM3Q14202 1370 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms