RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CIZ1Q9ULV3 898 aaPredicted RBP7.95□□□□□ -1.14
RNU6-1140P-201ENST00000410517 VASPP50552 380 aaPredicted RBP7.93□□□□□ -1.14
RNU6-1140P-201ENST00000410517 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
RNU6-1140P-201ENST00000410517 PBX2P40425 430 aa7.91□□□□□ -1.14
RNU6-1140P-201ENST00000410517 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
RNU6-1140P-201ENST00000410517 NUDT7P0C024 238 aa7.86□□□□□ -1.15
RNU6-1140P-201ENST00000410517 ADGRD1Q6QNK2 874 aa7.84□□□□□ -1.15
RNU6-1140P-201ENST00000410517 SPOCK2Q92563 424 aa7.84□□□□□ -1.15
RNU6-1140P-201ENST00000410517 MS4A4AQ96JQ5 239 aa7.84□□□□□ -1.15
RNU6-1140P-201ENST00000410517 LHX6Q9UPM6 363 aa7.84□□□□□ -1.15
RNU6-1140P-201ENST00000410517 SOX12O15370 315 aa7.83□□□□□ -1.16
RNU6-1140P-201ENST00000410517 IRX2Q9BZI1 471 aaPredicted RBP7.83□□□□□ -1.16
RNU6-1140P-201ENST00000410517 PHF8Q9UPP1 1060 aa7.82□□□□□ -1.16
RNU6-1140P-201ENST00000410517 ARHGAP33O14559 1287 aa7.79□□□□□ -1.16
RNU6-1140P-201ENST00000410517 KCTD12Q96CX2 325 aaKnown RBP7.79□□□□□ -1.16
RNU6-1140P-201ENST00000410517 RGS20O76081 388 aa7.76□□□□□ -1.17
RNU6-1140P-201ENST00000410517 STAC3Q96MF2 364 aa7.76□□□□□ -1.17
RNU6-1140P-201ENST00000410517 PCDHGA4Q9Y5G9 962 aa7.76□□□□□ -1.17
RNU6-1140P-201ENST00000410517 IFNLR1Q8IU57 520 aaPredicted RBP7.75□□□□□ -1.17
RNU6-1140P-201ENST00000410517 TK2O00142 265 aa7.74□□□□□ -1.17
RNU6-1140P-201ENST00000410517 C2orf72A6NCS6 295 aa7.73□□□□□ -1.17
RNU6-1140P-201ENST00000410517 HRO43593 1189 aa7.73□□□□□ -1.17
RNU6-1140P-201ENST00000410517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1140P-201ENST00000410517 PTPN5P54829 565 aa7.72□□□□□ -1.17
RNU6-1140P-201ENST00000410517 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
RNU6-1140P-201ENST00000410517 TRIM41Q8WV44 630 aa7.72□□□□□ -1.17
RNU6-1140P-201ENST00000410517 ZFP91Q96JP5 570 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1140P-201ENST00000410517 PSEN2P49810 448 aa7.71□□□□□ -1.18
RNU6-1140P-201ENST00000410517 PSDA5PKW4 1024 aaPredicted RBP7.7□□□□□ -1.18
RNU6-1140P-201ENST00000410517 KIF3CO14782 793 aa7.7□□□□□ -1.18
RNU6-1140P-201ENST00000410517 SLC34A2O95436 690 aa7.7□□□□□ -1.18
RNU6-1140P-201ENST00000410517 NLRP6P59044 892 aa7.7□□□□□ -1.18
RNU6-1140P-201ENST00000410517 RIOK3O14730 519 aaKnown RBP7.69□□□□□ -1.18
RNU6-1140P-201ENST00000410517 A0A0G2JS52 829 aa7.66□□□□□ -1.18
RNU6-1140P-201ENST00000410517 IFFO2Q5TF58 517 aa7.66□□□□□ -1.18
RNU6-1140P-201ENST00000410517 VGFO15240 615 aaPredicted RBP7.65□□□□□ -1.18
RNU6-1140P-201ENST00000410517 FBXO22Q8NEZ5 403 aa7.65□□□□□ -1.18
RNU6-1140P-201ENST00000410517 Q6ZNB5 142 aa7.64□□□□□ -1.19
RNU6-1140P-201ENST00000410517 TMC2Q8TDI7 906 aa7.63□□□□□ -1.19
RNU6-1140P-201ENST00000410517 RNF25Q96BH1 459 aaPredicted RBP7.62□□□□□ -1.19
RNU6-1140P-201ENST00000410517 PPP4R3BQ5MIZ7 849 aa7.61□□□□□ -1.19
RNU6-1140P-201ENST00000410517 KCNK17Q96T54 332 aa7.61□□□□□ -1.19
RNU6-1140P-201ENST00000410517 KCNH8Q96L42 1107 aa7.6□□□□□ -1.19
RNU6-1140P-201ENST00000410517 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
RNU6-1140P-201ENST00000410517 BCL11BQ9C0K0 894 aaPredicted RBP7.58□□□□□ -1.2
RNU6-1140P-201ENST00000410517 VPS9D1Q9Y2B5 631 aa7.58□□□□□ -1.2
RNU6-1140P-201ENST00000410517 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
RNU6-1140P-201ENST00000410517 MFRPQ9BY79 579 aa7.57□□□□□ -1.2
RNU6-1140P-201ENST00000410517 GOLGA8CPA6NN73 597 aa7.56□□□□□ -1.2
RNU6-1140P-201ENST00000410517 STK24Q9Y6E0 443 aa7.55□□□□□ -1.2
RNU6-1140P-201ENST00000410517 PTCD2Q8WV60 388 aaKnown RBP7.54□□□□□ -1.2
RNU6-1140P-201ENST00000410517 WNT2BQ93097 391 aa7.53□□□□□ -1.2
RNU6-1140P-201ENST00000410517 TBC1D12O60347 775 aa7.49□□□□□ -1.21
RNU6-1140P-201ENST00000410517 MRPL50Q8N5N7 158 aaKnown RBP7.49□□□□□ -1.21
RNU6-1140P-201ENST00000410517 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
RNU6-1140P-201ENST00000410517 BHMG1C9JSJ3 638 aaPredicted RBP7.48□□□□□ -1.21
RNU6-1140P-201ENST00000410517 SLC4A5Q9BY07 1137 aa7.47□□□□□ -1.21
RNU6-1140P-201ENST00000410517 STK25O00506 426 aa7.46□□□□□ -1.22
RNU6-1140P-201ENST00000410517 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.22
RNU6-1140P-201ENST00000410517 PLPP6Q8IY26 295 aa7.46□□□□□ -1.22
RNU6-1140P-201ENST00000410517 LAPTM4AQ15012 233 aa7.45□□□□□ -1.22
RNU6-1140P-201ENST00000410517 LCE2BO14633 110 aa7.44□□□□□ -1.22
RNU6-1140P-201ENST00000410517 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
RNU6-1140P-201ENST00000410517 ITGBL1O95965 494 aaPredicted RBP7.43□□□□□ -1.22
RNU6-1140P-201ENST00000410517 FOXK1P85037 733 aa7.43□□□□□ -1.22
RNU6-1140P-201ENST00000410517 BCL2L12Q9HB09 334 aa7.43□□□□□ -1.22
RNU6-1140P-201ENST00000410517 GFRA3O60609 400 aa7.42□□□□□ -1.22
RNU6-1140P-201ENST00000410517 PPP1R37O75864 691 aa7.42□□□□□ -1.22
RNU6-1140P-201ENST00000410517 ZBED2Q9BTP6 218 aa7.42□□□□□ -1.22
RNU6-1140P-201ENST00000410517 PTPREP23469 700 aa7.41□□□□□ -1.22
RNU6-1140P-201ENST00000410517 NBPF3Q9H094 633 aa7.41□□□□□ -1.22
RNU6-1140P-201ENST00000410517 DSG2Q14126 1118 aa7.39□□□□□ -1.23
RNU6-1140P-201ENST00000410517 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
RNU6-1140P-201ENST00000410517 UPF1Q92900 1129 aaKnown RBP eCLIP7.37□□□□□ -1.23
RNU6-1140P-201ENST00000410517 GPHNQ9NQX3 736 aaPredicted RBP7.37□□□□□ -1.23
RNU6-1140P-201ENST00000410517 KCNC4Q03721 635 aa7.36□□□□□ -1.23
RNU6-1140P-201ENST00000410517 BCAMP50895 628 aa7.35□□□□□ -1.23
RNU6-1140P-201ENST00000410517 FOSBP53539 338 aa7.34□□□□□ -1.23
RNU6-1140P-201ENST00000410517 ZNF787Q6DD87 383 aa7.34□□□□□ -1.23
RNU6-1140P-201ENST00000410517 OXER1Q8TDS5 423 aa7.33□□□□□ -1.24
RNU6-1140P-201ENST00000410517 NRG2O14511 850 aaPredicted RBP7.3□□□□□ -1.24
RNU6-1140P-201ENST00000410517 NYAP1Q6ZVC0 841 aa7.3□□□□□ -1.24
RNU6-1140P-201ENST00000410517 ZDHHC16Q969W1 377 aa7.3□□□□□ -1.24
RNU6-1140P-201ENST00000410517 ZNF775Q96BV0 537 aaPredicted RBP7.3□□□□□ -1.24
RNU6-1140P-201ENST00000410517 ADAM33Q9BZ11 813 aa7.3□□□□□ -1.24
RNU6-1140P-201ENST00000410517 WBP1LQ9NX94 342 aa7.3□□□□□ -1.24
RNU6-1140P-201ENST00000410517 SOWAHBA6NEL2 793 aa7.29□□□□□ -1.24
RNU6-1140P-201ENST00000410517 JPH4Q96JJ6 628 aa7.28□□□□□ -1.24
RNU6-1140P-201ENST00000410517 RABGEF1Q9UJ41 708 aa7.28□□□□□ -1.24
RNU6-1140P-201ENST00000410517 PROX2Q3B8N5 592 aa7.27□□□□□ -1.25
RNU6-1140P-201ENST00000410517 PRKD2Q9BZL6 878 aa7.27□□□□□ -1.25
RNU6-1140P-201ENST00000410517 PPP1R3GB7ZBB8 358 aa7.24□□□□□ -1.25
RNU6-1140P-201ENST00000410517 ECM2O94769 699 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1140P-201ENST00000410517 LAPTM4BQ86VI4 370 aa7.24□□□□□ -1.25
RNU6-1140P-201ENST00000410517 ZFRQ96KR1 1074 aaKnown RBP7.24□□□□□ -1.25
RNU6-1140P-201ENST00000410517 ANO8Q9HCE9 1232 aaPredicted RBP7.24□□□□□ -1.25
RNU6-1140P-201ENST00000410517 EVI5O60447 810 aa7.22□□□□□ -1.25
RNU6-1140P-201ENST00000410517 COL9A1P20849 921 aa7.21□□□□□ -1.26
RNU6-1140P-201ENST00000410517 KIAA1468Q9P260 1216 aa7.21□□□□□ -1.26
RNU6-1140P-201ENST00000410517 SEPT9Q9UHD8 586 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms