RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PPP1R37O75864 691 aa10.18□□□□□ -0.78
LSM5-205ENST00000409952 PRKCSHP14314 528 aaPredicted RBP10.18□□□□□ -0.78
LSM5-205ENST00000409952 RYDENQ9NUL5 291 aaKnown RBP10.18□□□□□ -0.78
LSM5-205ENST00000409952 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.14□□□□□ -0.79
LSM5-205ENST00000409952 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
LSM5-205ENST00000409952 G3V3G9 751 aa10.1□□□□□ -0.79
LSM5-205ENST00000409952 TMEM92Q6UXU6 159 aa10.1□□□□□ -0.79
LSM5-205ENST00000409952 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
LSM5-205ENST00000409952 ST18O60284 1047 aa10.08□□□□□ -0.8
LSM5-205ENST00000409952 KIF3CO14782 793 aa10.07□□□□□ -0.8
LSM5-205ENST00000409952 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
LSM5-205ENST00000409952 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
LSM5-205ENST00000409952 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
LSM5-205ENST00000409952 SPNS2Q8IVW8 549 aa10.01□□□□□ -0.81
LSM5-205ENST00000409952 HOXB3P14651 431 aaPredicted RBP9.99□□□□□ -0.81
LSM5-205ENST00000409952 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
LSM5-205ENST00000409952 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
LSM5-205ENST00000409952 CRISPLD2Q9H0B8 497 aa9.98□□□□□ -0.81
LSM5-205ENST00000409952 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
LSM5-205ENST00000409952 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
LSM5-205ENST00000409952 SNPHO15079 494 aa9.96□□□□□ -0.82
LSM5-205ENST00000409952 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
LSM5-205ENST00000409952 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
LSM5-205ENST00000409952 MARVELD3Q96A59 401 aa9.94□□□□□ -0.82
LSM5-205ENST00000409952 FOXK1P85037 733 aa9.93□□□□□ -0.82
LSM5-205ENST00000409952 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
LSM5-205ENST00000409952 POTEB3A0JP26 581 aa9.92□□□□□ -0.82
LSM5-205ENST00000409952 POTEBQ6S5H4 581 aa9.92□□□□□ -0.82
LSM5-205ENST00000409952 CFAP44Q96MT7 982 aa9.92□□□□□ -0.82
LSM5-205ENST00000409952 MFSD10Q14728 455 aa9.91□□□□□ -0.82
LSM5-205ENST00000409952 SLC34A2O95436 690 aa9.89□□□□□ -0.83
LSM5-205ENST00000409952 PDE4AP27815 886 aa9.89□□□□□ -0.83
LSM5-205ENST00000409952 DSG2Q14126 1118 aa9.88□□□□□ -0.83
LSM5-205ENST00000409952 DOK7Q18PE1 504 aa9.87□□□□□ -0.83
LSM5-205ENST00000409952 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
LSM5-205ENST00000409952 KDM2AQ9Y2K7 1162 aa9.86□□□□□ -0.83
LSM5-205ENST00000409952 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
LSM5-205ENST00000409952 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
LSM5-205ENST00000409952 HOXB1P14653 301 aaPredicted RBP9.83□□□□□ -0.84
LSM5-205ENST00000409952 PPP1R15BQ5SWA1 713 aa9.83□□□□□ -0.84
LSM5-205ENST00000409952 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
LSM5-205ENST00000409952 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
LSM5-205ENST00000409952 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
LSM5-205ENST00000409952 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
LSM5-205ENST00000409952 RIMBP2O15034 1052 aa9.8□□□□□ -0.84
LSM5-205ENST00000409952 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
LSM5-205ENST00000409952 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
LSM5-205ENST00000409952 EMP3P54852 163 aa9.79□□□□□ -0.84
LSM5-205ENST00000409952 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
LSM5-205ENST00000409952 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.84
LSM5-205ENST00000409952 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
LSM5-205ENST00000409952 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
LSM5-205ENST00000409952 HS3ST6Q96QI5 342 aa9.78□□□□□ -0.84
LSM5-205ENST00000409952 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
LSM5-205ENST00000409952 ARSIQ5FYB1 569 aa9.75□□□□□ -0.85
LSM5-205ENST00000409952 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
LSM5-205ENST00000409952 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
LSM5-205ENST00000409952 EMILIN3Q9NT22 766 aa9.73□□□□□ -0.85
LSM5-205ENST00000409952 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
LSM5-205ENST00000409952 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
LSM5-205ENST00000409952 TBC1D12O60347 775 aa9.68□□□□□ -0.86
LSM5-205ENST00000409952 ERBB3P21860 1342 aa9.67□□□□□ -0.86
LSM5-205ENST00000409952 NUDT7P0C024 238 aa9.67□□□□□ -0.86
LSM5-205ENST00000409952 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
LSM5-205ENST00000409952 ANO8Q9HCE9 1232 aaPredicted RBP9.67□□□□□ -0.86
LSM5-205ENST00000409952 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
LSM5-205ENST00000409952 E2F4Q16254 413 aa9.66□□□□□ -0.86
LSM5-205ENST00000409952 UPF1Q92900 1129 aaKnown RBP eCLIP9.65□□□□□ -0.86
LSM5-205ENST00000409952 DAXXQ9UER7 740 aaPredicted RBP9.65□□□□□ -0.86
LSM5-205ENST00000409952 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
LSM5-205ENST00000409952 ARXQ96QS3 562 aa9.64□□□□□ -0.87
LSM5-205ENST00000409952 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
LSM5-205ENST00000409952 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
LSM5-205ENST00000409952 EVI5O60447 810 aa9.6□□□□□ -0.87
LSM5-205ENST00000409952 MAP3K9P80192 1104 aa9.6□□□□□ -0.87
LSM5-205ENST00000409952 NBR1Q14596 966 aa9.6□□□□□ -0.87
LSM5-205ENST00000409952 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
LSM5-205ENST00000409952 ZNF687Q8N1G0 1237 aa9.6□□□□□ -0.87
LSM5-205ENST00000409952 PSDA5PKW4 1024 aaPredicted RBP9.59□□□□□ -0.87
LSM5-205ENST00000409952 DPYSL4O14531 572 aa9.59□□□□□ -0.87
LSM5-205ENST00000409952 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
LSM5-205ENST00000409952 PDIA6Q15084 440 aa9.58□□□□□ -0.88
LSM5-205ENST00000409952 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
LSM5-205ENST00000409952 PTGER2P43116 358 aa9.56□□□□□ -0.88
LSM5-205ENST00000409952 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
LSM5-205ENST00000409952 SPDYE16A6NNV3 312 aaPredicted RBP9.55□□□□□ -0.88
LSM5-205ENST00000409952 FOSBP53539 338 aa9.55□□□□□ -0.88
LSM5-205ENST00000409952 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
LSM5-205ENST00000409952 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
LSM5-205ENST00000409952 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
LSM5-205ENST00000409952 PBX2P40425 430 aa9.5□□□□□ -0.89
LSM5-205ENST00000409952 PPP4R3BQ5MIZ7 849 aa9.5□□□□□ -0.89
LSM5-205ENST00000409952 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
LSM5-205ENST00000409952 PCDHGA10Q9Y5H3 936 aa9.5□□□□□ -0.89
LSM5-205ENST00000409952 PHF14O94880 888 aa9.49□□□□□ -0.89
LSM5-205ENST00000409952 ZNF454Q8N9F8 522 aa9.48□□□□□ -0.89
LSM5-205ENST00000409952 RNF166Q96A37 237 aaPredicted RBP9.48□□□□□ -0.89
LSM5-205ENST00000409952 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
LSM5-205ENST00000409952 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
LSM5-205ENST00000409952 ARHGAP33O14559 1287 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms