RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
VAMP8-202ENST00000409760 LMTK3Q96Q04 1460 aa15.51■□□□□ 0.07
VAMP8-202ENST00000409760 MYO5CQ9NQX4 1742 aa15.51■□□□□ 0.07
VAMP8-202ENST00000409760 RIMS1Q86UR5 1692 aaKnown RBP15.51■□□□□ 0.07
VAMP8-202ENST00000409760 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
VAMP8-202ENST00000409760 PCF11O94913 1555 aaKnown RBP15.49■□□□□ 0.07
VAMP8-202ENST00000409760 ATP1B4Q9UN42 357 aaPredicted RBP15.48■□□□□ 0.07
VAMP8-202ENST00000409760 CASKIN1Q8WXD9 1431 aa15.48■□□□□ 0.07
VAMP8-202ENST00000409760 KDM5CP41229 1560 aa15.47■□□□□ 0.07
VAMP8-202ENST00000409760 EFCAB2Q5VUJ9 269 aa15.47■□□□□ 0.07
VAMP8-202ENST00000409760 CDK11AQ9UQ88 783 aaPredicted RBP15.46■□□□□ 0.07
VAMP8-202ENST00000409760 ATP10AO60312 1499 aa15.46■□□□□ 0.06
VAMP8-202ENST00000409760 ARHGEF12Q9NZN5 1544 aa15.45■□□□□ 0.06
VAMP8-202ENST00000409760 CLIP1P30622 1438 aa15.44■□□□□ 0.06
VAMP8-202ENST00000409760 CDC42BPBQ9Y5S2 1711 aa15.44■□□□□ 0.06
VAMP8-202ENST00000409760 ZNF518AQ6AHZ1 1483 aa15.44■□□□□ 0.06
VAMP8-202ENST00000409760 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
VAMP8-202ENST00000409760 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
VAMP8-202ENST00000409760 CCDC18Q5T9S5 1454 aa15.43■□□□□ 0.06
VAMP8-202ENST00000409760 PREX2Q70Z35 1606 aa15.43■□□□□ 0.06
VAMP8-202ENST00000409760 FYCO1Q9BQS8 1478 aa15.41■□□□□ 0.06
VAMP8-202ENST00000409760 AFAP1Q8N556 730 aa15.41■□□□□ 0.06
VAMP8-202ENST00000409760 ABCC1P33527 1531 aa15.41■□□□□ 0.06
VAMP8-202ENST00000409760 FER1L4A9Z1Z3 1794 aa15.41■□□□□ 0.06
VAMP8-202ENST00000409760 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
VAMP8-202ENST00000409760 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
VAMP8-202ENST00000409760 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
VAMP8-202ENST00000409760 MLH3Q9UHC1 1453 aa15.39■□□□□ 0.05
VAMP8-202ENST00000409760 MLECQ14165 292 aa15.38■□□□□ 0.05
VAMP8-202ENST00000409760 ABCA6Q8N139 1617 aa15.38■□□□□ 0.05
VAMP8-202ENST00000409760 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
VAMP8-202ENST00000409760 CDC42BPAQ5VT25 1732 aa15.37■□□□□ 0.05
VAMP8-202ENST00000409760 HSPA2P54652 639 aa15.35■□□□□ 0.05
VAMP8-202ENST00000409760 AGLP35573 1532 aa15.33■□□□□ 0.05
VAMP8-202ENST00000409760 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
VAMP8-202ENST00000409760 SAMD9LQ8IVG5 1584 aa15.32■□□□□ 0.04
VAMP8-202ENST00000409760 KIDINS220Q9ULH0 1771 aa15.32■□□□□ 0.04
VAMP8-202ENST00000409760 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
VAMP8-202ENST00000409760 FBXO41Q8TF61 875 aa15.31■□□□□ 0.04
VAMP8-202ENST00000409760 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
VAMP8-202ENST00000409760 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
VAMP8-202ENST00000409760 PREX1Q8TCU6 1659 aa15.3■□□□□ 0.04
VAMP8-202ENST00000409760 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
VAMP8-202ENST00000409760 LOC105371045A0A1W2PR82 267 aa15.26■□□□□ 0.03
VAMP8-202ENST00000409760 C3P01024 1663 aa15.25■□□□□ 0.03
VAMP8-202ENST00000409760 KIAA1107Q9UPP5 1409 aa15.25■□□□□ 0.03
VAMP8-202ENST00000409760 INO80Q9ULG1 1556 aaPredicted RBP15.24■□□□□ 0.03
VAMP8-202ENST00000409760 PLXNC1O60486 1568 aa15.24■□□□□ 0.03
VAMP8-202ENST00000409760 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
VAMP8-202ENST00000409760 TIAM1Q13009 1591 aa15.23■□□□□ 0.03
VAMP8-202ENST00000409760 HNRNPMP52272 730 aaKnown RBP eCLIP15.22■□□□□ 0.03
VAMP8-202ENST00000409760 MYT1LQ9UL68 1186 aa15.22■□□□□ 0.03
VAMP8-202ENST00000409760 ATP7AQ04656 1500 aa15.22■□□□□ 0.03
VAMP8-202ENST00000409760 PLEKHH2Q8IVE3 1493 aa15.21■□□□□ 0.03
VAMP8-202ENST00000409760 UHRF1BP1Q6BDS2 1440 aa15.21■□□□□ 0.03
VAMP8-202ENST00000409760 ZNF777Q9ULD5 760 aaPredicted RBP15.21■□□□□ 0.03
VAMP8-202ENST00000409760 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
VAMP8-202ENST00000409760 MTUS2Q5JR59 1369 aa15.2■□□□□ 0.02
VAMP8-202ENST00000409760 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
VAMP8-202ENST00000409760 SPAG9O60271 1321 aaKnown RBP15.19■□□□□ 0.02
VAMP8-202ENST00000409760 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
VAMP8-202ENST00000409760 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
VAMP8-202ENST00000409760 MBD5Q9P267 1494 aa15.19■□□□□ 0.02
VAMP8-202ENST00000409760 SETD1BQ9UPS6 1966 aaKnown RBP15.18■□□□□ 0.02
VAMP8-202ENST00000409760 MROH2AA6NES4 1674 aa15.18■□□□□ 0.02
VAMP8-202ENST00000409760 ZNF644Q9H582 1327 aaPredicted RBP15.17■□□□□ 0.02
VAMP8-202ENST00000409760 A2MP01023 1474 aa15.16■□□□□ 0.02
VAMP8-202ENST00000409760 CERKQ8TCT0 537 aa15.16■□□□□ 0.02
VAMP8-202ENST00000409760 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
VAMP8-202ENST00000409760 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
VAMP8-202ENST00000409760 NPATQ14207 1427 aa15.15■□□□□ 0.02
VAMP8-202ENST00000409760 ZMYM3Q14202 1370 aa15.13■□□□□ 0.01
VAMP8-202ENST00000409760 PTPRTO14522 1441 aa15.13■□□□□ 0.01
VAMP8-202ENST00000409760 NCOA1Q15788 1441 aa15.12■□□□□ 0.01
VAMP8-202ENST00000409760 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
VAMP8-202ENST00000409760 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
VAMP8-202ENST00000409760 NCOA2Q15596 1464 aa15.11■□□□□ 0.01
VAMP8-202ENST00000409760 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
VAMP8-202ENST00000409760 PTPRKQ15262 1439 aa15.1■□□□□ 0.01
VAMP8-202ENST00000409760 ESF1Q9H501 851 aaKnown RBP15.1■□□□□ 0.01
VAMP8-202ENST00000409760 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
VAMP8-202ENST00000409760 CAMSAP2Q08AD1 1489 aa15.08■□□□□ 0.01
VAMP8-202ENST00000409760 LTBP4Q8N2S1 1624 aa15.08■□□□□ 0
VAMP8-202ENST00000409760 ZNF142P52746 1687 aaPredicted RBP15.08■□□□□ 0
VAMP8-202ENST00000409760 MAP3K1Q13233 1512 aa15.07■□□□□ 0
VAMP8-202ENST00000409760 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
VAMP8-202ENST00000409760 CCDC141Q6ZP82 1450 aa15.07■□□□□ 0
VAMP8-202ENST00000409760 CAMSAP1Q5T5Y3 1602 aa15.06■□□□□ 0
VAMP8-202ENST00000409760 APLP2Q06481 763 aa15.06■□□□□ 0
VAMP8-202ENST00000409760 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
VAMP8-202ENST00000409760 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
VAMP8-202ENST00000409760 CEP170BQ9Y4F5 1589 aaPredicted RBP15.04■□□□□ -0
VAMP8-202ENST00000409760 LRRC9Q6ZRR7 1453 aa15.04■□□□□ -0
VAMP8-202ENST00000409760 GGT6Q6P531 493 aa15.04■□□□□ -0
VAMP8-202ENST00000409760 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
VAMP8-202ENST00000409760 PLA2R1Q13018 1463 aa15.03■□□□□ -0
VAMP8-202ENST00000409760 TCOF1Q13428 1488 aaKnown RBP15.02■□□□□ -0
VAMP8-202ENST00000409760 FAM135AQ9P2D6 1515 aa15.01□□□□□ -0.01
VAMP8-202ENST00000409760 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
VAMP8-202ENST00000409760 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms