RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
POLR1A-202ENST00000409024 MAP3K4Q9Y6R4 1608 aa14.71□□□□□ -0.05
POLR1A-202ENST00000409024 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
POLR1A-202ENST00000409024 KDM5BQ9UGL1 1544 aa14.68□□□□□ -0.06
POLR1A-202ENST00000409024 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
POLR1A-202ENST00000409024 ILDR2Q71H61 639 aa14.66□□□□□ -0.06
POLR1A-202ENST00000409024 KIF14Q15058 1648 aa14.66□□□□□ -0.06
POLR1A-202ENST00000409024 PTPN23Q9H3S7 1636 aa14.66□□□□□ -0.06
POLR1A-202ENST00000409024 ARID3CA6NKF2 412 aa14.65□□□□□ -0.06
POLR1A-202ENST00000409024 ITSN2Q9NZM3 1697 aa14.65□□□□□ -0.06
POLR1A-202ENST00000409024 DISP3Q9P2K9 1392 aa14.64□□□□□ -0.07
POLR1A-202ENST00000409024 ACIN1Q9UKV3 1341 aaKnown RBP14.63□□□□□ -0.07
POLR1A-202ENST00000409024 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
POLR1A-202ENST00000409024 CD109Q6YHK3 1445 aa14.62□□□□□ -0.07
POLR1A-202ENST00000409024 PTPRMP28827 1452 aa14.62□□□□□ -0.07
POLR1A-202ENST00000409024 ZCCHC11Q5TAX3 1644 aaKnown RBP14.6□□□□□ -0.07
POLR1A-202ENST00000409024 CERKQ8TCT0 537 aa14.6□□□□□ -0.07
POLR1A-202ENST00000409024 SETD5Q9C0A6 1442 aa14.59□□□□□ -0.07
POLR1A-202ENST00000409024 WDR7Q9Y4E6 1490 aa14.59□□□□□ -0.07
POLR1A-202ENST00000409024 CCER1Q8TC90 406 aaPredicted RBP14.59□□□□□ -0.07
POLR1A-202ENST00000409024 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
POLR1A-202ENST00000409024 CLSPNQ9HAW4 1339 aa14.59□□□□□ -0.07
POLR1A-202ENST00000409024 AKNAQ7Z591 1439 aa14.58□□□□□ -0.07
POLR1A-202ENST00000409024 CFDP1Q9UEE9 299 aaPredicted RBP14.58□□□□□ -0.08
POLR1A-202ENST00000409024 ITGAEP38570 1179 aa14.55□□□□□ -0.08
POLR1A-202ENST00000409024 RSPH4AQ5TD94 716 aa14.55□□□□□ -0.08
POLR1A-202ENST00000409024 HFM1A2PYH4 1435 aa14.55□□□□□ -0.08
POLR1A-202ENST00000409024 ROCK1Q13464 1354 aa14.54□□□□□ -0.08
POLR1A-202ENST00000409024 CDC42BPAQ5VT25 1732 aa14.54□□□□□ -0.08
POLR1A-202ENST00000409024 ADAMTSL3P82987 1691 aa14.53□□□□□ -0.08
POLR1A-202ENST00000409024 DNMT1P26358 1616 aaKnown RBP14.53□□□□□ -0.08
POLR1A-202ENST00000409024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.08
POLR1A-202ENST00000409024 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.08
POLR1A-202ENST00000409024 CAMSAP2Q08AD1 1489 aa14.52□□□□□ -0.08
POLR1A-202ENST00000409024 RAB3GAP2Q9H2M9 1393 aa14.52□□□□□ -0.08
POLR1A-202ENST00000409024 PREX2Q70Z35 1606 aa14.52□□□□□ -0.09
POLR1A-202ENST00000409024 PLEKHH2Q8IVE3 1493 aa14.51□□□□□ -0.09
POLR1A-202ENST00000409024 DAPK1P53355 1430 aa14.51□□□□□ -0.09
POLR1A-202ENST00000409024 PTPRKQ15262 1439 aa14.51□□□□□ -0.09
POLR1A-202ENST00000409024 ARID4BQ4LE39 1312 aaPredicted RBP14.51□□□□□ -0.09
POLR1A-202ENST00000409024 HSPA2P54652 639 aa14.51□□□□□ -0.09
POLR1A-202ENST00000409024 PLCH2O75038 1416 aa14.5□□□□□ -0.09
POLR1A-202ENST00000409024 ABCC5O15440 1437 aa14.49□□□□□ -0.09
POLR1A-202ENST00000409024 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
POLR1A-202ENST00000409024 ARHGEF5Q12774 1597 aa14.48□□□□□ -0.09
POLR1A-202ENST00000409024 SHANK2Q9UPX8 1470 aa14.48□□□□□ -0.09
POLR1A-202ENST00000409024 NAIPQ13075 1403 aa14.48□□□□□ -0.09
POLR1A-202ENST00000409024 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
POLR1A-202ENST00000409024 MYO5CQ9NQX4 1742 aa14.47□□□□□ -0.09
POLR1A-202ENST00000409024 ADGRL2O95490 1459 aa14.47□□□□□ -0.09
POLR1A-202ENST00000409024 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.09
POLR1A-202ENST00000409024 TTC37Q6PGP7 1564 aa14.46□□□□□ -0.09
POLR1A-202ENST00000409024 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
POLR1A-202ENST00000409024 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
POLR1A-202ENST00000409024 EFCAB2Q5VUJ9 269 aa14.45□□□□□ -0.1
POLR1A-202ENST00000409024 GCC2Q8IWJ2 1684 aa14.45□□□□□ -0.1
POLR1A-202ENST00000409024 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
POLR1A-202ENST00000409024 ZNF777Q9ULD5 760 aaPredicted RBP14.44□□□□□ -0.1
POLR1A-202ENST00000409024 ARHGAP5Q13017 1502 aa14.44□□□□□ -0.1
POLR1A-202ENST00000409024 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
POLR1A-202ENST00000409024 TSPY4P0CV99 314 aa14.43□□□□□ -0.1
POLR1A-202ENST00000409024 TSPY10P0CW01 314 aa14.43□□□□□ -0.1
POLR1A-202ENST00000409024 ANKRD30AQ9BXX3 1397 aa14.43□□□□□ -0.1
POLR1A-202ENST00000409024 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
POLR1A-202ENST00000409024 MADDQ8WXG6 1647 aa14.42□□□□□ -0.1
POLR1A-202ENST00000409024 BCORL1Q5H9F3 1711 aa14.42□□□□□ -0.1
POLR1A-202ENST00000409024 SAMD9LQ8IVG5 1584 aa14.42□□□□□ -0.1
POLR1A-202ENST00000409024 ADGBQ8N7X0 1667 aa14.42□□□□□ -0.1
POLR1A-202ENST00000409024 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
POLR1A-202ENST00000409024 CCDC141Q6ZP82 1450 aa14.41□□□□□ -0.1
POLR1A-202ENST00000409024 NCOA1Q15788 1441 aa14.41□□□□□ -0.1
POLR1A-202ENST00000409024 MAST1Q9Y2H9 1570 aa14.39□□□□□ -0.11
POLR1A-202ENST00000409024 CHIC2Q9UKJ5 165 aa14.39□□□□□ -0.11
POLR1A-202ENST00000409024 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
POLR1A-202ENST00000409024 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
POLR1A-202ENST00000409024 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
POLR1A-202ENST00000409024 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
POLR1A-202ENST00000409024 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
POLR1A-202ENST00000409024 ABCC1P33527 1531 aa14.36□□□□□ -0.11
POLR1A-202ENST00000409024 CFAP74Q9C0B2 1584 aa14.35□□□□□ -0.11
POLR1A-202ENST00000409024 TIMELESSQ9UNS1 1208 aa14.35□□□□□ -0.11
POLR1A-202ENST00000409024 RTEL1-TNFRSF6BF6WH68 1400 aa14.34□□□□□ -0.11
POLR1A-202ENST00000409024 RIMS1Q86UR5 1692 aaKnown RBP14.34□□□□□ -0.11
POLR1A-202ENST00000409024 FANCAO15360 1455 aa14.34□□□□□ -0.11
POLR1A-202ENST00000409024 NEO1Q92859 1461 aa14.34□□□□□ -0.11
POLR1A-202ENST00000409024 SYCP2Q9BX26 1530 aa14.34□□□□□ -0.11
POLR1A-202ENST00000409024 POGZQ7Z3K3 1410 aa14.33□□□□□ -0.11
POLR1A-202ENST00000409024 PLXNC1O60486 1568 aa14.31□□□□□ -0.12
POLR1A-202ENST00000409024 ANKRD50Q9ULJ7 1429 aa14.31□□□□□ -0.12
POLR1A-202ENST00000409024 ARHGEF12Q9NZN5 1544 aa14.3□□□□□ -0.12
POLR1A-202ENST00000409024 KIF15Q9NS87 1388 aa14.29□□□□□ -0.12
POLR1A-202ENST00000409024 YEATS2Q9ULM3 1422 aa14.29□□□□□ -0.12
POLR1A-202ENST00000409024 TRIM52Q96A61 297 aa14.27□□□□□ -0.13
POLR1A-202ENST00000409024 FRMPD1Q5SYB0 1578 aa14.26□□□□□ -0.13
POLR1A-202ENST00000409024 DUOX2Q9NRD8 1548 aa14.26□□□□□ -0.13
POLR1A-202ENST00000409024 MLECQ14165 292 aa14.26□□□□□ -0.13
POLR1A-202ENST00000409024 MPHOSPH9Q99550 1183 aa14.26□□□□□ -0.13
POLR1A-202ENST00000409024 ARHGEF40Q8TER5 1519 aa14.25□□□□□ -0.13
POLR1A-202ENST00000409024 DENND4BO75064 1496 aaPredicted RBP14.25□□□□□ -0.13
POLR1A-202ENST00000409024 SCAPERQ9BY12 1400 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms