RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 FYCO1Q9BQS8 1478 aa15.61■□□□□ 0.09
NIF3L1-202ENST00000409020 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
NIF3L1-202ENST00000409020 MYO5CQ9NQX4 1742 aa15.6■□□□□ 0.09
NIF3L1-202ENST00000409020 ARHGEF40Q8TER5 1519 aa15.59■□□□□ 0.09
NIF3L1-202ENST00000409020 SCAPERQ9BY12 1400 aa15.59■□□□□ 0.09
NIF3L1-202ENST00000409020 YEATS2Q9ULM3 1422 aa15.59■□□□□ 0.09
NIF3L1-202ENST00000409020 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
NIF3L1-202ENST00000409020 POGZQ7Z3K3 1410 aa15.58■□□□□ 0.08
NIF3L1-202ENST00000409020 LOC105371045A0A1W2PR82 267 aa15.57■□□□□ 0.08
NIF3L1-202ENST00000409020 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
NIF3L1-202ENST00000409020 ARHGAP5Q13017 1502 aa15.57■□□□□ 0.08
NIF3L1-202ENST00000409020 ZMYM4Q5VZL5 1548 aa15.57■□□□□ 0.08
NIF3L1-202ENST00000409020 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
NIF3L1-202ENST00000409020 ARID4BQ4LE39 1312 aaPredicted RBP15.54■□□□□ 0.08
NIF3L1-202ENST00000409020 ZFYVE16Q7Z3T8 1539 aa15.54■□□□□ 0.08
NIF3L1-202ENST00000409020 CDC42BPBQ9Y5S2 1711 aa15.54■□□□□ 0.08
NIF3L1-202ENST00000409020 ADAMTSL3P82987 1691 aa15.53■□□□□ 0.08
NIF3L1-202ENST00000409020 BCORL1Q5H9F3 1711 aa15.52■□□□□ 0.08
NIF3L1-202ENST00000409020 PREX2Q70Z35 1606 aa15.52■□□□□ 0.07
NIF3L1-202ENST00000409020 ARHGEF12Q9NZN5 1544 aa15.52■□□□□ 0.07
NIF3L1-202ENST00000409020 AFAP1Q8N556 730 aa15.51■□□□□ 0.07
NIF3L1-202ENST00000409020 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
NIF3L1-202ENST00000409020 HECW2Q9P2P5 1572 aa15.5■□□□□ 0.07
NIF3L1-202ENST00000409020 PTPRMP28827 1452 aa15.5■□□□□ 0.07
NIF3L1-202ENST00000409020 CDC42BPAQ5VT25 1732 aa15.49■□□□□ 0.07
NIF3L1-202ENST00000409020 MAGI2Q86UL8 1455 aa15.49■□□□□ 0.07
NIF3L1-202ENST00000409020 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
NIF3L1-202ENST00000409020 ABCC1P33527 1531 aa15.48■□□□□ 0.07
NIF3L1-202ENST00000409020 ZNF518AQ6AHZ1 1483 aa15.48■□□□□ 0.07
NIF3L1-202ENST00000409020 KDM5CP41229 1560 aa15.47■□□□□ 0.07
NIF3L1-202ENST00000409020 GPATCH8Q9UKJ3 1502 aaKnown RBP15.47■□□□□ 0.07
NIF3L1-202ENST00000409020 MLECQ14165 292 aa15.46■□□□□ 0.07
NIF3L1-202ENST00000409020 KCNA4P22459 653 aa15.45■□□□□ 0.06
NIF3L1-202ENST00000409020 ZNF777Q9ULD5 760 aaPredicted RBP15.44■□□□□ 0.06
NIF3L1-202ENST00000409020 MTUS2Q5JR59 1369 aa15.44■□□□□ 0.06
NIF3L1-202ENST00000409020 ATP10AO60312 1499 aa15.44■□□□□ 0.06
NIF3L1-202ENST00000409020 SAMD9LQ8IVG5 1584 aa15.44■□□□□ 0.06
NIF3L1-202ENST00000409020 ITSN2Q9NZM3 1697 aa15.44■□□□□ 0.06
NIF3L1-202ENST00000409020 RIMS1Q86UR5 1692 aaKnown RBP15.44■□□□□ 0.06
NIF3L1-202ENST00000409020 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
NIF3L1-202ENST00000409020 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
NIF3L1-202ENST00000409020 ABCA6Q8N139 1617 aa15.42■□□□□ 0.06
NIF3L1-202ENST00000409020 SYCP2Q9BX26 1530 aa15.41■□□□□ 0.06
NIF3L1-202ENST00000409020 MYT1LQ9UL68 1186 aa15.41■□□□□ 0.06
NIF3L1-202ENST00000409020 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
NIF3L1-202ENST00000409020 CCNB3Q8WWL7 1395 aa15.4■□□□□ 0.06
NIF3L1-202ENST00000409020 EHBP1L1Q8N3D4 1523 aa15.4■□□□□ 0.06
NIF3L1-202ENST00000409020 HNRNPMP52272 730 aaKnown RBP eCLIP15.4■□□□□ 0.06
NIF3L1-202ENST00000409020 TIAM1Q13009 1591 aa15.4■□□□□ 0.06
NIF3L1-202ENST00000409020 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
NIF3L1-202ENST00000409020 ZNF644Q9H582 1327 aaPredicted RBP15.39■□□□□ 0.05
NIF3L1-202ENST00000409020 CFDP1Q9UEE9 299 aaPredicted RBP15.38■□□□□ 0.05
NIF3L1-202ENST00000409020 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
NIF3L1-202ENST00000409020 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
NIF3L1-202ENST00000409020 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
NIF3L1-202ENST00000409020 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
NIF3L1-202ENST00000409020 LMTK3Q96Q04 1460 aa15.34■□□□□ 0.05
NIF3L1-202ENST00000409020 REREQ9P2R6 1566 aa15.34■□□□□ 0.05
NIF3L1-202ENST00000409020 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
NIF3L1-202ENST00000409020 CEBPAP49715 358 aaPredicted RBP15.32■□□□□ 0.04
NIF3L1-202ENST00000409020 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
NIF3L1-202ENST00000409020 KANK4Q5T7N3 995 aaPredicted RBP15.32■□□□□ 0.04
NIF3L1-202ENST00000409020 MBD5Q9P267 1494 aa15.31■□□□□ 0.04
NIF3L1-202ENST00000409020 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
NIF3L1-202ENST00000409020 LRRC9Q6ZRR7 1453 aa15.3■□□□□ 0.04
NIF3L1-202ENST00000409020 ATP7AQ04656 1500 aa15.3■□□□□ 0.04
NIF3L1-202ENST00000409020 PLEKHH2Q8IVE3 1493 aa15.3■□□□□ 0.04
NIF3L1-202ENST00000409020 SUPT6HQ7KZ85 1726 aaKnown RBP15.3■□□□□ 0.04
NIF3L1-202ENST00000409020 HSPA2P54652 639 aa15.29■□□□□ 0.04
NIF3L1-202ENST00000409020 AGLP35573 1532 aa15.29■□□□□ 0.04
NIF3L1-202ENST00000409020 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
NIF3L1-202ENST00000409020 PLXNC1O60486 1568 aa15.26■□□□□ 0.03
NIF3L1-202ENST00000409020 A2MP01023 1474 aa15.24■□□□□ 0.03
NIF3L1-202ENST00000409020 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
NIF3L1-202ENST00000409020 C3P01024 1663 aa15.22■□□□□ 0.03
NIF3L1-202ENST00000409020 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.03
NIF3L1-202ENST00000409020 ILDR1Q86SU0 546 aaPredicted RBP15.19■□□□□ 0.02
NIF3L1-202ENST00000409020 PREX1Q8TCU6 1659 aa15.19■□□□□ 0.02
NIF3L1-202ENST00000409020 RTEL1-TNFRSF6BF6WH68 1400 aa15.18■□□□□ 0.02
NIF3L1-202ENST00000409020 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
NIF3L1-202ENST00000409020 GGT6Q6P531 493 aa15.18■□□□□ 0.02
NIF3L1-202ENST00000409020 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
NIF3L1-202ENST00000409020 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
NIF3L1-202ENST00000409020 ARHGEF5Q12774 1597 aa15.16■□□□□ 0.02
NIF3L1-202ENST00000409020 CLTCQ00610 1675 aaKnown RBP15.16■□□□□ 0.02
NIF3L1-202ENST00000409020 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
NIF3L1-202ENST00000409020 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
NIF3L1-202ENST00000409020 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
NIF3L1-202ENST00000409020 UHRF1BP1Q6BDS2 1440 aa15.15■□□□□ 0.02
NIF3L1-202ENST00000409020 MROH2AA6NES4 1674 aa15.13■□□□□ 0.01
NIF3L1-202ENST00000409020 MIA2Q96PC5 1412 aa15.12■□□□□ 0.01
NIF3L1-202ENST00000409020 KIF3BO15066 747 aa15.11■□□□□ 0.01
NIF3L1-202ENST00000409020 RSPH4AQ5TD94 716 aa15.11■□□□□ 0.01
NIF3L1-202ENST00000409020 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
NIF3L1-202ENST00000409020 TSPY4P0CV99 314 aa15.1■□□□□ 0.01
NIF3L1-202ENST00000409020 TSPY10P0CW01 314 aa15.1■□□□□ 0.01
NIF3L1-202ENST00000409020 APLP2Q06481 763 aa15.1■□□□□ 0.01
NIF3L1-202ENST00000409020 STRCQ7RTU9 1775 aa15.1■□□□□ 0.01
NIF3L1-202ENST00000409020 PTPRKQ15262 1439 aa15.09■□□□□ 0.01
NIF3L1-202ENST00000409020 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms