RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 SIGLEC1Q9BZZ2 1709 aa36.57■■■■□ 3.45
KDELR3-202ENST00000409006 EFCAB2Q5VUJ9 269 aa36.57■■■■□ 3.44
KDELR3-202ENST00000409006 YEATS2Q9ULM3 1422 aa36.57■■■■□ 3.44
KDELR3-202ENST00000409006 CDC42BPBQ9Y5S2 1711 aa36.56■■■■□ 3.44
KDELR3-202ENST00000409006 POGZQ7Z3K3 1410 aa36.56■■■■□ 3.44
KDELR3-202ENST00000409006 ARID4BQ4LE39 1312 aaPredicted RBP36.56■■■■□ 3.44
KDELR3-202ENST00000409006 FYCO1Q9BQS8 1478 aa36.56■■■■□ 3.44
KDELR3-202ENST00000409006 ZFYVE16Q7Z3T8 1539 aa36.54■■■■□ 3.44
KDELR3-202ENST00000409006 ARHGAP5Q13017 1502 aa36.53■■■■□ 3.44
KDELR3-202ENST00000409006 MADDQ8WXG6 1647 aa36.52■■■■□ 3.44
KDELR3-202ENST00000409006 PTPRMP28827 1452 aa36.5■■■■□ 3.43
KDELR3-202ENST00000409006 MAGI2Q86UL8 1455 aa36.5■■■■□ 3.43
KDELR3-202ENST00000409006 PREX2Q70Z35 1606 aa36.46■■■■□ 3.43
KDELR3-202ENST00000409006 CDC42BPAQ5VT25 1732 aa36.44■■■■□ 3.42
KDELR3-202ENST00000409006 RIMS1Q86UR5 1692 aaKnown RBP36.42■■■■□ 3.42
KDELR3-202ENST00000409006 AFAP1Q8N556 730 aa36.38■■■■□ 3.41
KDELR3-202ENST00000409006 ZNF518AQ6AHZ1 1483 aa36.37■■■■□ 3.41
KDELR3-202ENST00000409006 KDM5CP41229 1560 aa36.36■■■■□ 3.41
KDELR3-202ENST00000409006 ATP10AO60312 1499 aa36.33■■■■□ 3.41
KDELR3-202ENST00000409006 ARHGEF12Q9NZN5 1544 aa36.33■■■■□ 3.41
KDELR3-202ENST00000409006 ITSN2Q9NZM3 1697 aa36.32■■■■□ 3.41
KDELR3-202ENST00000409006 ABCC1P33527 1531 aa36.32■■■■□ 3.4
KDELR3-202ENST00000409006 CEP162Q5TB80 1403 aa36.32■■■■□ 3.4
KDELR3-202ENST00000409006 MLECQ14165 292 aa36.29■■■■□ 3.4
KDELR3-202ENST00000409006 C9orf84Q5VXU9 1444 aa36.28■■■■□ 3.4
KDELR3-202ENST00000409006 TRAPPC8Q9Y2L5 1435 aa36.27■■■■□ 3.4
KDELR3-202ENST00000409006 FER1L4A9Z1Z3 1794 aa36.27■■■■□ 3.4
KDELR3-202ENST00000409006 GPATCH8Q9UKJ3 1502 aaKnown RBP36.24■■■■□ 3.39
KDELR3-202ENST00000409006 DIP2CQ9Y2E4 1556 aa36.23■■■■□ 3.39
KDELR3-202ENST00000409006 SAMD9LQ8IVG5 1584 aa36.22■■■■□ 3.39
KDELR3-202ENST00000409006 ABCA6Q8N139 1617 aa36.22■■■■□ 3.39
KDELR3-202ENST00000409006 MLH3Q9UHC1 1453 aa36.19■■■■□ 3.38
KDELR3-202ENST00000409006 MYT1LQ9UL68 1186 aa36.19■■■■□ 3.38
KDELR3-202ENST00000409006 LOC105371045A0A1W2PR82 267 aa36.18■■■■□ 3.38
KDELR3-202ENST00000409006 PLPPR3Q6T4P5 718 aa36.18■■■■□ 3.38
KDELR3-202ENST00000409006 ZNF777Q9ULD5 760 aaPredicted RBP36.17■■■■□ 3.38
KDELR3-202ENST00000409006 KIDINS220Q9ULH0 1771 aa36.17■■■■□ 3.38
KDELR3-202ENST00000409006 MTUS2Q5JR59 1369 aa36.15■■■■□ 3.38
KDELR3-202ENST00000409006 LMTK3Q96Q04 1460 aa36.13■■■■□ 3.37
KDELR3-202ENST00000409006 SYCP2Q9BX26 1530 aa36.13■■■■□ 3.37
KDELR3-202ENST00000409006 REREQ9P2R6 1566 aa36.12■■■■□ 3.37
KDELR3-202ENST00000409006 CCNB3Q8WWL7 1395 aa36.09■■■■□ 3.37
KDELR3-202ENST00000409006 EHBP1L1Q8N3D4 1523 aa36.08■■■■□ 3.37
KDELR3-202ENST00000409006 HNRNPMP52272 730 aaKnown RBP eCLIP36.07■■■■□ 3.36
KDELR3-202ENST00000409006 TIAM1Q13009 1591 aa36.06■■■■□ 3.36
KDELR3-202ENST00000409006 CFDP1Q9UEE9 299 aaPredicted RBP36.06■■■■□ 3.36
KDELR3-202ENST00000409006 AGLP35573 1532 aa36■■■■□ 3.35
KDELR3-202ENST00000409006 KIAA1107Q9UPP5 1409 aa36■■■■□ 3.35
KDELR3-202ENST00000409006 CEBPAP49715 358 aaPredicted RBP35.98■■■■□ 3.35
KDELR3-202ENST00000409006 PLEKHH2Q8IVE3 1493 aa35.97■■■■□ 3.35
KDELR3-202ENST00000409006 ZNF644Q9H582 1327 aaPredicted RBP35.96■■■■□ 3.35
KDELR3-202ENST00000409006 SPAG9O60271 1321 aaKnown RBP35.95■■■■□ 3.35
KDELR3-202ENST00000409006 HSPA2P54652 639 aa35.95■■■■□ 3.35
KDELR3-202ENST00000409006 ILDR1Q86SU0 546 aaPredicted RBP35.94■■■■□ 3.34
KDELR3-202ENST00000409006 INO80Q9ULG1 1556 aaPredicted RBP35.93■■■■□ 3.34
KDELR3-202ENST00000409006 ATP7AQ04656 1500 aa35.93■■■■□ 3.34
KDELR3-202ENST00000409006 SUPT6HQ7KZ85 1726 aaKnown RBP35.91■■■■□ 3.34
KDELR3-202ENST00000409006 VPS8Q8N3P4 1428 aa35.91■■■■□ 3.34
KDELR3-202ENST00000409006 C3P01024 1663 aa35.89■■■■□ 3.34
KDELR3-202ENST00000409006 PREX1Q8TCU6 1659 aa35.88■■■■□ 3.33
KDELR3-202ENST00000409006 NCOA2Q15596 1464 aa35.88■■■■□ 3.33
KDELR3-202ENST00000409006 MBD5Q9P267 1494 aa35.86■■■■□ 3.33
KDELR3-202ENST00000409006 SETD1BQ9UPS6 1966 aaKnown RBP35.82■■■■□ 3.33
KDELR3-202ENST00000409006 PLXNC1O60486 1568 aa35.81■■■■□ 3.32
KDELR3-202ENST00000409006 A2MP01023 1474 aa35.78■■■■□ 3.32
KDELR3-202ENST00000409006 LRRC9Q6ZRR7 1453 aa35.78■■■■□ 3.32
KDELR3-202ENST00000409006 ADGBQ8N7X0 1667 aa35.77■■■■□ 3.32
KDELR3-202ENST00000409006 ESF1Q9H501 851 aaKnown RBP35.75■■■■□ 3.31
KDELR3-202ENST00000409006 CAMSAP2Q08AD1 1489 aa35.74■■■■□ 3.31
KDELR3-202ENST00000409006 KANK4Q5T7N3 995 aaPredicted RBP35.71■■■■□ 3.31
KDELR3-202ENST00000409006 MROH2AA6NES4 1674 aa35.7■■■■□ 3.31
KDELR3-202ENST00000409006 CNTLNQ9NXG0 1405 aa35.7■■■■□ 3.31
KDELR3-202ENST00000409006 CLTCQ00610 1675 aaKnown RBP35.68■■■■□ 3.3
KDELR3-202ENST00000409006 MAP3K1Q13233 1512 aa35.68■■■■□ 3.3
KDELR3-202ENST00000409006 RTEL1-TNFRSF6BF6WH68 1400 aa35.67■■■■□ 3.3
KDELR3-202ENST00000409006 UHRF1BP1Q6BDS2 1440 aa35.67■■■■□ 3.3
KDELR3-202ENST00000409006 STRCQ7RTU9 1775 aa35.66■■■■□ 3.3
KDELR3-202ENST00000409006 CCDC141Q6ZP82 1450 aa35.66■■■■□ 3.3
KDELR3-202ENST00000409006 ZMYM3Q14202 1370 aa35.62■■■■□ 3.29
KDELR3-202ENST00000409006 GGT6Q6P531 493 aa35.61■■■■□ 3.29
KDELR3-202ENST00000409006 ARHGEF5Q12774 1597 aa35.6■■■■□ 3.29
KDELR3-202ENST00000409006 DHX29Q7Z478 1369 aaKnown RBP35.56■■■■□ 3.28
KDELR3-202ENST00000409006 RSPH4AQ5TD94 716 aa35.56■■■■□ 3.28
KDELR3-202ENST00000409006 NPATQ14207 1427 aa35.51■■■■□ 3.28
KDELR3-202ENST00000409006 MYOM3Q5VTT5 1437 aa35.49■■■■□ 3.27
KDELR3-202ENST00000409006 FBXO41Q8TF61 875 aa35.49■■■■□ 3.27
KDELR3-202ENST00000409006 PTPRKQ15262 1439 aa35.46■■■■□ 3.27
KDELR3-202ENST00000409006 KIF3BO15066 747 aa35.45■■■■□ 3.27
KDELR3-202ENST00000409006 PPP6R1Q9UPN7 881 aa35.45■■■■□ 3.27
KDELR3-202ENST00000409006 MIA2Q96PC5 1412 aa35.44■■■■□ 3.26
KDELR3-202ENST00000409006 TSPY4P0CV99 314 aa35.44■■■■□ 3.26
KDELR3-202ENST00000409006 TSPY10P0CW01 314 aa35.44■■■■□ 3.26
KDELR3-202ENST00000409006 MYO3AQ8NEV4 1616 aa35.43■■■■□ 3.26
KDELR3-202ENST00000409006 MAST1Q9Y2H9 1570 aa35.42■■■■□ 3.26
KDELR3-202ENST00000409006 ZNF142P52746 1687 aaPredicted RBP35.38■■■■□ 3.25
KDELR3-202ENST00000409006 APLP2Q06481 763 aa35.38■■■■□ 3.25
KDELR3-202ENST00000409006 CAMSAP1Q5T5Y3 1602 aa35.37■■■■□ 3.25
KDELR3-202ENST00000409006 DMRT2Q9Y5R5 561 aa35.37■■■■□ 3.25
KDELR3-202ENST00000409006 NCOA1Q15788 1441 aa35.36■■■■□ 3.25
KDELR3-202ENST00000409006 KDM5DQ9BY66 1539 aa35.33■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms