RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 DHX57Q6P158 1386 aaKnown RBP12.19□□□□□ -0.46
NCOA1-204ENST00000405141 ARID3AQ99856 593 aa12.18□□□□□ -0.46
NCOA1-204ENST00000405141 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
NCOA1-204ENST00000405141 ROCK2O75116 1388 aaKnown RBP12.16□□□□□ -0.46
NCOA1-204ENST00000405141 POGKQ9P215 609 aa12.16□□□□□ -0.46
NCOA1-204ENST00000405141 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
NCOA1-204ENST00000405141 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
NCOA1-204ENST00000405141 ZRSR1Q15695 479 aaKnown RBP12.16□□□□□ -0.46
NCOA1-204ENST00000405141 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
NCOA1-204ENST00000405141 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
NCOA1-204ENST00000405141 APBB1O00213 710 aa12.15□□□□□ -0.47
NCOA1-204ENST00000405141 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
NCOA1-204ENST00000405141 SLC4A3P48751 1232 aa12.14□□□□□ -0.47
NCOA1-204ENST00000405141 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
NCOA1-204ENST00000405141 RAPGEF2Q9Y4G8 1499 aa12.13□□□□□ -0.47
NCOA1-204ENST00000405141 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
NCOA1-204ENST00000405141 MS4A1P11836 297 aa12.12□□□□□ -0.47
NCOA1-204ENST00000405141 OS9Q13438 667 aaPredicted RBP12.12□□□□□ -0.47
NCOA1-204ENST00000405141 MFAP1P55081 439 aaKnown RBP12.12□□□□□ -0.47
NCOA1-204ENST00000405141 RALBP1Q15311 655 aa12.12□□□□□ -0.47
NCOA1-204ENST00000405141 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
NCOA1-204ENST00000405141 ITPRIPQ8IWB1 547 aa12.12□□□□□ -0.47
NCOA1-204ENST00000405141 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
NCOA1-204ENST00000405141 SOX12O15370 315 aa12.11□□□□□ -0.47
NCOA1-204ENST00000405141 PLIN1O60240 522 aa12.11□□□□□ -0.47
NCOA1-204ENST00000405141 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
NCOA1-204ENST00000405141 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
NCOA1-204ENST00000405141 FHOD3Q2V2M9 1422 aa12.09□□□□□ -0.47
NCOA1-204ENST00000405141 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
NCOA1-204ENST00000405141 EXOC6Q8TAG9 804 aa12.08□□□□□ -0.48
NCOA1-204ENST00000405141 FMN1Q68DA7 1419 aa12.08□□□□□ -0.48
NCOA1-204ENST00000405141 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
NCOA1-204ENST00000405141 KCNJ4P48050 445 aa12.07□□□□□ -0.48
NCOA1-204ENST00000405141 CHMP4BQ9H444 224 aaKnown RBP12.07□□□□□ -0.48
NCOA1-204ENST00000405141 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
NCOA1-204ENST00000405141 NUP155O75694 1391 aa12.06□□□□□ -0.48
NCOA1-204ENST00000405141 DRC7Q8IY82 874 aa12.06□□□□□ -0.48
NCOA1-204ENST00000405141 RWDD1Q9H446 243 aaPredicted RBP12.06□□□□□ -0.48
NCOA1-204ENST00000405141 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
NCOA1-204ENST00000405141 STK26Q9P289 416 aa12.06□□□□□ -0.48
NCOA1-204ENST00000405141 PDE4AP27815 886 aa12.05□□□□□ -0.48
NCOA1-204ENST00000405141 FGD1P98174 961 aa12.05□□□□□ -0.48
NCOA1-204ENST00000405141 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
NCOA1-204ENST00000405141 PNNQ9H307 717 aaKnown RBP12.05□□□□□ -0.48
NCOA1-204ENST00000405141 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
NCOA1-204ENST00000405141 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.486e-8■■■■■ 27.5
NCOA1-204ENST00000405141 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
NCOA1-204ENST00000405141 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
NCOA1-204ENST00000405141 GOLGA6L6A8MZA4 724 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 MCCP23508 829 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 KANK1Q14678 1352 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
NCOA1-204ENST00000405141 PMFBP1Q8TBY8 1022 aa12.02□□□□□ -0.48
NCOA1-204ENST00000405141 RRP1P56182 461 aaKnown RBP12.02□□□□□ -0.49
NCOA1-204ENST00000405141 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
NCOA1-204ENST00000405141 FANCIQ9NVI1 1328 aa12.01□□□□□ -0.49
NCOA1-204ENST00000405141 PRKRIP1Q9H875 184 aaPredicted RBP12.01□□□□□ -0.49
NCOA1-204ENST00000405141 RRP7AQ9Y3A4 280 aaKnown RBP12.01□□□□□ -0.49
NCOA1-204ENST00000405141 NOL8Q76FK4 1167 aaKnown RBP12.01□□□□□ -0.49
NCOA1-204ENST00000405141 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
NCOA1-204ENST00000405141 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
NCOA1-204ENST00000405141 MYBBP1AQ9BQG0 1328 aaKnown RBP12□□□□□ -0.49
NCOA1-204ENST00000405141 KIF15Q9NS87 1388 aa12□□□□□ -0.49
NCOA1-204ENST00000405141 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
NCOA1-204ENST00000405141 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.495e-8■■■■■ 28.9
NCOA1-204ENST00000405141 FOXD4L5Q5VV16 416 aaPredicted RBP11.99□□□□□ -0.49
NCOA1-204ENST00000405141 FOXD4L4Q8WXT5 416 aaPredicted RBP11.99□□□□□ -0.49
NCOA1-204ENST00000405141 IPO8O15397 1037 aaKnown RBP11.99□□□□□ -0.49
NCOA1-204ENST00000405141 GSE1Q14687 1217 aa11.99□□□□□ -0.49
NCOA1-204ENST00000405141 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
NCOA1-204ENST00000405141 ZBED9Q6R2W3 1325 aa11.99□□□□□ -0.49
NCOA1-204ENST00000405141 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
NCOA1-204ENST00000405141 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
NCOA1-204ENST00000405141 ANKRD30AQ9BXX3 1397 aa11.98□□□□□ -0.49
NCOA1-204ENST00000405141 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
NCOA1-204ENST00000405141 PANK3Q9H999 370 aa11.97□□□□□ -0.49
NCOA1-204ENST00000405141 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
NCOA1-204ENST00000405141 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.49
NCOA1-204ENST00000405141 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
NCOA1-204ENST00000405141 GGT6Q6P531 493 aa11.96□□□□□ -0.49
NCOA1-204ENST00000405141 PTMSP20962 102 aa11.96□□□□□ -0.5
NCOA1-204ENST00000405141 CCDC18Q5T9S5 1454 aa11.96□□□□□ -0.5
NCOA1-204ENST00000405141 PDE3BQ13370 1112 aa11.96□□□□□ -0.5
NCOA1-204ENST00000405141 MLECQ14165 292 aa11.95□□□□□ -0.5
NCOA1-204ENST00000405141 CENPQQ7L2Z9 268 aaPredicted RBP11.95□□□□□ -0.5
NCOA1-204ENST00000405141 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
NCOA1-204ENST00000405141 HDGFL2Q7Z4V5 671 aaPredicted RBP11.94□□□□□ -0.5
NCOA1-204ENST00000405141 KIAA2012Q0VF49 1180 aa11.93□□□□□ -0.5
NCOA1-204ENST00000405141 USP35Q9P2H5 1018 aa11.93□□□□□ -0.5
NCOA1-204ENST00000405141 USP47Q96K76 1375 aa11.92□□□□□ -0.5
NCOA1-204ENST00000405141 TRIM6-TRIM34B2RNG4 842 aa11.92□□□□□ -0.5
NCOA1-204ENST00000405141 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
NCOA1-204ENST00000405141 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
NCOA1-204ENST00000405141 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
NCOA1-204ENST00000405141 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
NCOA1-204ENST00000405141 NRDCO43847 1150 aa11.91□□□□□ -0.5
NCOA1-204ENST00000405141 CFAP44Q96MT7 982 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms