RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 APLP2Q06481 763 aa6.08□□□□□ -1.44
CCDC178-204ENST00000403303 RETREG2Q8NC44 543 aa6.08□□□□□ -1.44
CCDC178-204ENST00000403303 TESPA1A2RU30 521 aaPredicted RBP6.07□□□□□ -1.44
CCDC178-204ENST00000403303 NLRP7Q8WX94 980 aa6.07□□□□□ -1.44
CCDC178-204ENST00000403303 ZBTB47Q9UFB7 747 aaPredicted RBP6.07□□□□□ -1.44
CCDC178-204ENST00000403303 TTLL12Q14166 644 aaPredicted RBP6.07□□□□□ -1.44
CCDC178-204ENST00000403303 GSE1Q14687 1217 aa6.07□□□□□ -1.44
CCDC178-204ENST00000403303 TMCO4Q5TGY1 634 aa6.06□□□□□ -1.44
CCDC178-204ENST00000403303 LHX8Q68G74 356 aa6.06□□□□□ -1.44
CCDC178-204ENST00000403303 FBXW7Q969H0 707 aa6.06□□□□□ -1.44
CCDC178-204ENST00000403303 MFRPQ9BY79 579 aa6.06□□□□□ -1.44
CCDC178-204ENST00000403303 SMARCA2P51531 1590 aa6.06□□□□□ -1.44
CCDC178-204ENST00000403303 EIF5BO60841 1220 aaKnown RBP6.05□□□□□ -1.44
CCDC178-204ENST00000403303 SSUH2Q9Y2M2 353 aa6.05□□□□□ -1.44
CCDC178-204ENST00000403303 MFAP1P55081 439 aaKnown RBP6.04□□□□□ -1.44
CCDC178-204ENST00000403303 TRIM66O15016 1216 aa6.04□□□□□ -1.44
CCDC178-204ENST00000403303 HMGXB3Q12766 1538 aa6.04□□□□□ -1.44
CCDC178-204ENST00000403303 PLEKHG3A1L390 1219 aa6.03□□□□□ -1.44
CCDC178-204ENST00000403303 RFX1P22670 979 aa6.03□□□□□ -1.44
CCDC178-204ENST00000403303 AK7Q96M32 723 aa6.03□□□□□ -1.44
CCDC178-204ENST00000403303 BARGINQ6ZT62 677 aa6.02□□□□□ -1.45
CCDC178-204ENST00000403303 PHF8Q9UPP1 1060 aa6.02□□□□□ -1.45
CCDC178-204ENST00000403303 EIF4G1Q04637 1599 aaKnown RBP6.02□□□□□ -1.45
CCDC178-204ENST00000403303 SPDYE2BA6NHP3 402 aa6.02□□□□□ -1.45
CCDC178-204ENST00000403303 HAX1O00165 279 aa6.02□□□□□ -1.45
CCDC178-204ENST00000403303 SPDYE6P0CI01 402 aa6.02□□□□□ -1.45
CCDC178-204ENST00000403303 SPDYE2Q495Y8 402 aa6.02□□□□□ -1.45
CCDC178-204ENST00000403303 FECHP22830 423 aa6.01□□□□□ -1.45
CCDC178-204ENST00000403303 ARHGEF1Q92888 912 aaKnown RBP6.01□□□□□ -1.45
CCDC178-204ENST00000403303 CABP2Q9NPB3 220 aa6.01□□□□□ -1.45
CCDC178-204ENST00000403303 NCKAP5LQ9HCH0 1330 aa6.01□□□□□ -1.45
CCDC178-204ENST00000403303 NUTM2FA1L443 756 aa6□□□□□ -1.45
CCDC178-204ENST00000403303 IRF5Q13568 498 aa6□□□□□ -1.45
CCDC178-204ENST00000403303 GRXCR2A6NFK2 248 aa6□□□□□ -1.45
CCDC178-204ENST00000403303 DPYSL4O14531 572 aa6□□□□□ -1.45
CCDC178-204ENST00000403303 PARP9Q8IXQ6 854 aa6□□□□□ -1.45
CCDC178-204ENST00000403303 CCDC97Q96F63 343 aaPredicted RBP6□□□□□ -1.45
CCDC178-204ENST00000403303 EFCAB3Q8N7B9 438 aa5.99□□□□□ -1.45
CCDC178-204ENST00000403303 POLR3EQ9NVU0 708 aa5.98□□□□□ -1.45
CCDC178-204ENST00000403303 CHADLQ6NUI6 762 aa5.98□□□□□ -1.45
CCDC178-204ENST00000403303 WDR97A6NE52 1622 aa5.98□□□□□ -1.45
CCDC178-204ENST00000403303 CDK11BP21127 795 aaKnown RBP5.98□□□□□ -1.45
CCDC178-204ENST00000403303 CCDC102AQ96A19 550 aa5.98□□□□□ -1.45
CCDC178-204ENST00000403303 CDK11AQ9UQ88 783 aaPredicted RBP5.98□□□□□ -1.45
CCDC178-204ENST00000403303 POLR3GLQ9BT43 218 aa5.97□□□□□ -1.45
CCDC178-204ENST00000403303 TRAK2O60296 914 aa5.96□□□□□ -1.46
CCDC178-204ENST00000403303 CC2D2AQ9P2K1 1620 aa5.96□□□□□ -1.46
CCDC178-204ENST00000403303 SMARCA4P51532 1647 aa5.96□□□□□ -1.46
CCDC178-204ENST00000403303 RYDENQ9NUL5 291 aaKnown RBP5.95□□□□□ -1.46
CCDC178-204ENST00000403303 ZBTB12Q9Y330 459 aaPredicted RBP5.95□□□□□ -1.46
CCDC178-204ENST00000403303 CHMP4AQ9BY43 222 aa5.95□□□□□ -1.46
CCDC178-204ENST00000403303 FAM161AQ3B820 660 aa5.95□□□□□ -1.46
CCDC178-204ENST00000403303 DHX37Q8IY37 1157 aaKnown RBP5.95□□□□□ -1.46
CCDC178-204ENST00000403303 PCDH10Q9P2E7 1040 aa5.94□□□□□ -1.46
CCDC178-204ENST00000403303 MCM6Q14566 821 aa5.94□□□□□ -1.46
CCDC178-204ENST00000403303 RGS22Q8NE09 1264 aa5.93□□□□□ -1.46
CCDC178-204ENST00000403303 PPP1R1BQ9UD71 204 aaPredicted RBP5.93□□□□□ -1.46
CCDC178-204ENST00000403303 CDCA8Q53HL2 280 aa5.93□□□□□ -1.46
CCDC178-204ENST00000403303 REPIN1Q9BWE0 567 aaKnown RBP5.93□□□□□ -1.46
CCDC178-204ENST00000403303 NCAPD3P42695 1498 aa5.92□□□□□ -1.46
CCDC178-204ENST00000403303 CSPP1Q1MSJ5 1256 aa5.92□□□□□ -1.46
CCDC178-204ENST00000403303 PROCA1Q8NCQ7 364 aaPredicted RBP5.92□□□□□ -1.46
CCDC178-204ENST00000403303 UPF1Q92900 1129 aaKnown RBP eCLIP5.92□□□□□ -1.46
CCDC178-204ENST00000403303 DDX27Q96GQ7 796 aaKnown RBP5.92□□□□□ -1.46
CCDC178-204ENST00000403303 SCRIBQ14160 1630 aa5.92□□□□□ -1.46
CCDC178-204ENST00000403303 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.91□□□□□ -1.46
CCDC178-204ENST00000403303 MS4A1P11836 297 aa5.91□□□□□ -1.46
CCDC178-204ENST00000403303 PROSER2Q86WR7 435 aaPredicted RBP5.9□□□□□ -1.46
CCDC178-204ENST00000403303 DDX12PQ92771 950 aa5.9□□□□□ -1.46
CCDC178-204ENST00000403303 ONECUT3O60422 494 aaPredicted RBP5.9□□□□□ -1.46
CCDC178-204ENST00000403303 PRR29P0C7W0 189 aa5.9□□□□□ -1.46
CCDC178-204ENST00000403303 GDPD2Q9HCC8 539 aa5.9□□□□□ -1.47
CCDC178-204ENST00000403303 PSEN1P49768 467 aa5.89□□□□□ -1.47
CCDC178-204ENST00000403303 MNX1P50219 401 aaPredicted RBP5.89□□□□□ -1.47
CCDC178-204ENST00000403303 SMYD5Q6GMV2 418 aa5.89□□□□□ -1.47
CCDC178-204ENST00000403303 GIGYF2Q6Y7W6 1299 aaKnown RBP5.89□□□□□ -1.47
CCDC178-204ENST00000403303 POM121CA8CG34 1229 aa5.88□□□□□ -1.47
CCDC178-204ENST00000403303 CREBZFQ9NS37 354 aa5.88□□□□□ -1.47
CCDC178-204ENST00000403303 BAZ1AQ9NRL2 1556 aaPredicted RBP5.88□□□□□ -1.47
CCDC178-204ENST00000403303 PIP4P2Q8N4L2 257 aa5.88□□□□□ -1.47
CCDC178-204ENST00000403303 SNRKQ9NRH2 765 aa5.87□□□□□ -1.47
CCDC178-204ENST00000403303 ABL2P42684 1182 aa5.87□□□□□ -1.47
CCDC178-204ENST00000403303 E9PSI1 815 aa5.86□□□□□ -1.47
CCDC178-204ENST00000403303 PDAP1Q13442 181 aaKnown RBP5.86□□□□□ -1.47
CCDC178-204ENST00000403303 AKT1S1Q96B36 256 aa5.86□□□□□ -1.47
CCDC178-204ENST00000403303 EMILIN3Q9NT22 766 aa5.86□□□□□ -1.47
CCDC178-204ENST00000403303 ZNF330Q9Y3S2 320 aaPredicted RBP5.86□□□□□ -1.47
CCDC178-204ENST00000403303 FLIIQ13045 1269 aa5.86□□□□□ -1.47
CCDC178-204ENST00000403303 PELP1Q8IZL8 1130 aaKnown RBP5.86□□□□□ -1.47
CCDC178-204ENST00000403303 DDRGK1Q96HY6 314 aa5.86□□□□□ -1.47
CCDC178-204ENST00000403303 MDM2Q00987 491 aaPredicted RBP5.85□□□□□ -1.47
CCDC178-204ENST00000403303 BAZ1BQ9UIG0 1483 aaKnown RBP5.85□□□□□ -1.47
CCDC178-204ENST00000403303 PPM1GO15355 546 aaPredicted RBP5.84□□□□□ -1.47
CCDC178-204ENST00000403303 THOC2Q8NI27 1593 aaKnown RBP5.84□□□□□ -1.47
CCDC178-204ENST00000403303 CALR3Q96L12 384 aaKnown RBP5.84□□□□□ -1.47
CCDC178-204ENST00000403303 FBXO31Q5XUX0 539 aaPredicted RBP5.83□□□□□ -1.48
CCDC178-204ENST00000403303 IFNL1Q8IU54 200 aa5.83□□□□□ -1.48
CCDC178-204ENST00000403303 IVNS1ABPQ9Y6Y0 642 aa5.83□□□□□ -1.48
CCDC178-204ENST00000403303 GPR37O15354 613 aa5.83□□□□□ -1.48
CCDC178-204ENST00000403303 FBXO22Q8NEZ5 403 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms