RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TTC37Q6PGP7 1564 aa37.99■■■■□ 3.67
CPNE1-205ENST00000401607 AKNAQ7Z591 1439 aa37.99■■■■□ 3.67
CPNE1-205ENST00000401607 CLSPNQ9HAW4 1339 aa37.99■■■■□ 3.67
CPNE1-205ENST00000401607 PREX2Q70Z35 1606 aa37.98■■■■□ 3.67
CPNE1-205ENST00000401607 GCC2Q8IWJ2 1684 aa37.96■■■■□ 3.67
CPNE1-205ENST00000401607 CHIC2Q9UKJ5 165 aa37.94■■■■□ 3.66
CPNE1-205ENST00000401607 CDC42BPBQ9Y5S2 1711 aa37.94■■■■□ 3.66
CPNE1-205ENST00000401607 ZNF777Q9ULD5 760 aaPredicted RBP37.93■■■■□ 3.66
CPNE1-205ENST00000401607 ROCK1Q13464 1354 aa37.88■■■■□ 3.65
CPNE1-205ENST00000401607 RRP7BPQ9NSQ0 103 aa37.88■■■■□ 3.65
CPNE1-205ENST00000401607 CROCC2H7BZ55 1655 aa37.88■■■■□ 3.65
CPNE1-205ENST00000401607 MYO5CQ9NQX4 1742 aa37.85■■■■□ 3.65
CPNE1-205ENST00000401607 KCNH8Q96L42 1107 aa37.85■■■■□ 3.65
CPNE1-205ENST00000401607 MAPKBP1O60336 1514 aa37.85■■■■□ 3.65
CPNE1-205ENST00000401607 SAMD9LQ8IVG5 1584 aa37.84■■■■□ 3.65
CPNE1-205ENST00000401607 WDR7Q9Y4E6 1490 aa37.83■■■■□ 3.65
CPNE1-205ENST00000401607 ADGBQ8N7X0 1667 aa37.78■■■■□ 3.64
CPNE1-205ENST00000401607 ARHGAP5Q13017 1502 aa37.78■■■■□ 3.64
CPNE1-205ENST00000401607 KDM6BO15054 1643 aa37.78■■■■□ 3.64
CPNE1-205ENST00000401607 ARHGEF5Q12774 1597 aa37.76■■■■□ 3.64
CPNE1-205ENST00000401607 ADGRL2O95490 1459 aa37.75■■■■□ 3.63
CPNE1-205ENST00000401607 MBD5Q9P267 1494 aa37.74■■■■□ 3.63
CPNE1-205ENST00000401607 SHANK2Q9UPX8 1470 aa37.73■■■■□ 3.63
CPNE1-205ENST00000401607 PLCH2O75038 1416 aa37.73■■■■□ 3.63
CPNE1-205ENST00000401607 ASXL2Q76L83 1435 aa37.72■■■■□ 3.63
CPNE1-205ENST00000401607 NCOA1Q15788 1441 aa37.69■■■■□ 3.62
CPNE1-205ENST00000401607 HNRNPMP52272 730 aaKnown RBP eCLIP37.66■■■■□ 3.621e-7■■■■□ 25.4
CPNE1-205ENST00000401607 SYCP2Q9BX26 1530 aa37.65■■■■□ 3.62
CPNE1-205ENST00000401607 RIMBP3CA6NJZ7 1639 aa37.64■■■■□ 3.62
CPNE1-205ENST00000401607 RIMBP3BA6NNM3 1639 aa37.64■■■■□ 3.62
CPNE1-205ENST00000401607 RIMBP3Q9UFD9 1639 aa37.64■■■■□ 3.62
CPNE1-205ENST00000401607 ABCA9Q8IUA7 1624 aa37.64■■■■□ 3.62
CPNE1-205ENST00000401607 C9orf84Q5VXU9 1444 aa37.64■■■■□ 3.62
CPNE1-205ENST00000401607 CCDC141Q6ZP82 1450 aa37.63■■■■□ 3.62
CPNE1-205ENST00000401607 NPM1P06748 294 aaKnown RBP eCLIP37.63■■■■□ 3.61
CPNE1-205ENST00000401607 ARAP3Q8WWN8 1544 aa37.62■■■■□ 3.61
CPNE1-205ENST00000401607 PLEKHH2Q8IVE3 1493 aa37.61■■■■□ 3.61
CPNE1-205ENST00000401607 ANKRD30AQ9BXX3 1397 aa37.6■■■■□ 3.61
CPNE1-205ENST00000401607 KIAA1107Q9UPP5 1409 aa37.6■■■■□ 3.61
CPNE1-205ENST00000401607 RSPH4AQ5TD94 716 aa37.56■■■■□ 3.6
CPNE1-205ENST00000401607 EFCAB2Q5VUJ9 269 aa37.55■■■■□ 3.6
CPNE1-205ENST00000401607 TSPY4P0CV99 314 aa37.54■■■■□ 3.6
CPNE1-205ENST00000401607 TSPY10P0CW01 314 aa37.54■■■■□ 3.6
CPNE1-205ENST00000401607 ARHGEF12Q9NZN5 1544 aa37.53■■■■□ 3.6
CPNE1-205ENST00000401607 ABCC1P33527 1531 aa37.53■■■■□ 3.6
CPNE1-205ENST00000401607 MAST1Q9Y2H9 1570 aa37.51■■■■□ 3.6
CPNE1-205ENST00000401607 DENND4BO75064 1496 aaPredicted RBP37.48■■■■□ 3.59
CPNE1-205ENST00000401607 ACIN1Q9UKV3 1341 aaKnown RBP37.48■■■■□ 3.59
CPNE1-205ENST00000401607 TRIM52Q96A61 297 aa37.47■■■■□ 3.59
CPNE1-205ENST00000401607 CYB5RLQ6IPT4 315 aa37.45■■■■□ 3.59
CPNE1-205ENST00000401607 ANKRD50Q9ULJ7 1429 aa37.44■■■■□ 3.58
CPNE1-205ENST00000401607 SIN3AQ96ST3 1273 aa37.43■■■■□ 3.58
CPNE1-205ENST00000401607 KIF15Q9NS87 1388 aa37.41■■■■□ 3.58
CPNE1-205ENST00000401607 FANCAO15360 1455 aa37.4■■■■□ 3.58
CPNE1-205ENST00000401607 MPHOSPH9Q99550 1183 aa37.37■■■■□ 3.57
CPNE1-205ENST00000401607 TRAPPC8Q9Y2L5 1435 aa37.37■■■■□ 3.57
CPNE1-205ENST00000401607 PLXNC1O60486 1568 aa37.35■■■■□ 3.57
CPNE1-205ENST00000401607 NEUROD1Q13562 356 aa37.32■■■■□ 3.56
CPNE1-205ENST00000401607 PZPP20742 1482 aa37.31■■■■□ 3.56
CPNE1-205ENST00000401607 CD109Q6YHK3 1445 aa37.26■■■■□ 3.56
CPNE1-205ENST00000401607 ADGRL1O94910 1474 aa37.25■■■■□ 3.55
CPNE1-205ENST00000401607 TIMELESSQ9UNS1 1208 aa37.24■■■■□ 3.55
CPNE1-205ENST00000401607 KDM5DQ9BY66 1539 aa37.22■■■■□ 3.55
CPNE1-205ENST00000401607 SLC4A1APQ9BWU0 796 aaKnown RBP37.21■■■■□ 3.55
CPNE1-205ENST00000401607 SCAPERQ9BY12 1400 aa37.2■■■■□ 3.55
CPNE1-205ENST00000401607 ZFYVE16Q7Z3T8 1539 aa37.19■■■■□ 3.54
CPNE1-205ENST00000401607 CFAP74Q9C0B2 1584 aa37.19■■■■□ 3.54
CPNE1-205ENST00000401607 AFAP1Q8N556 730 aa37.19■■■■□ 3.54
CPNE1-205ENST00000401607 RTEL1-TNFRSF6BF6WH68 1400 aa37.19■■■■□ 3.54
CPNE1-205ENST00000401607 DUOX2Q9NRD8 1548 aa37.18■■■■□ 3.54
CPNE1-205ENST00000401607 FOXD1Q16676 465 aa37.16■■■■□ 3.54
CPNE1-205ENST00000401607 SPAG9O60271 1321 aaKnown RBP37.15■■■■□ 3.54
CPNE1-205ENST00000401607 INO80Q9ULG1 1556 aaPredicted RBP37.14■■■■□ 3.54
CPNE1-205ENST00000401607 ANKRD30BQ9BXX2 1392 aa37.13■■■■□ 3.53
CPNE1-205ENST00000401607 NUP155O75694 1391 aa37.13■■■■□ 3.53
CPNE1-205ENST00000401607 GLI2P10070 1586 aa37.12■■■■□ 3.53
CPNE1-205ENST00000401607 ZNF316A6NFI3 1004 aaPredicted RBP37.12■■■■□ 3.53
CPNE1-205ENST00000401607 MAP3K4Q9Y6R4 1608 aa37.11■■■■□ 3.53
CPNE1-205ENST00000401607 UNC13BO14795 1591 aa37.11■■■■□ 3.53
CPNE1-205ENST00000401607 ERBINQ96RT1 1412 aa37.1■■■■□ 3.53
CPNE1-205ENST00000401607 TONSLQ96HA7 1378 aa37.09■■■■□ 3.53
CPNE1-205ENST00000401607 ATP7AQ04656 1500 aa37.09■■■■□ 3.53
CPNE1-205ENST00000401607 NEO1Q92859 1461 aa37.04■■■■□ 3.52
CPNE1-205ENST00000401607 DIP2BQ9P265 1576 aa37.04■■■■□ 3.52
CPNE1-205ENST00000401607 ZNF518AQ6AHZ1 1483 aa37.03■■■■□ 3.52
CPNE1-205ENST00000401607 PPP1R15AO75807 674 aaPredicted RBP37.02■■■■□ 3.52
CPNE1-205ENST00000401607 PKD2Q13563 968 aa37.01■■■■□ 3.52
CPNE1-205ENST00000401607 FAM135AQ9P2D6 1515 aa37.01■■■■□ 3.51
CPNE1-205ENST00000401607 MAGI2Q86UL8 1455 aa36.99■■■■□ 3.51
CPNE1-205ENST00000401607 POGZQ7Z3K3 1410 aa36.99■■■■□ 3.51
CPNE1-205ENST00000401607 RPRD2Q5VT52 1461 aaKnown RBP36.99■■■■□ 3.51
CPNE1-205ENST00000401607 KDM5CP41229 1560 aa36.98■■■■□ 3.51
CPNE1-205ENST00000401607 KIDINS220Q9ULH0 1771 aa36.96■■■■□ 3.51
CPNE1-205ENST00000401607 IQGAP3Q86VI3 1631 aa36.95■■■■□ 3.51
CPNE1-205ENST00000401607 FAM69CQ0P6D2 419 aa36.89■■■■□ 3.5
CPNE1-205ENST00000401607 MLH3Q9UHC1 1453 aa36.86■■■■□ 3.49
CPNE1-205ENST00000401607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.85■■■■□ 3.499e-9■□□□□ 10.7
CPNE1-205ENST00000401607 HECW2Q9P2P5 1572 aa36.85■■■■□ 3.49
CPNE1-205ENST00000401607 DEPDC5O75140 1603 aa36.85■■■■□ 3.49
CPNE1-205ENST00000401607 MYT1LQ9UL68 1186 aa36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms