RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
VAMP1-203ENST00000400911 RIMS1Q86UR5 1692 aaKnown RBP24.22■■□□□ 1.47
VAMP1-203ENST00000400911 EFCAB2Q5VUJ9 269 aa24.2■■□□□ 1.46
VAMP1-203ENST00000400911 HECW1Q76N89 1606 aa24.17■■□□□ 1.46
VAMP1-203ENST00000400911 CDK11AQ9UQ88 783 aaPredicted RBP24.17■■□□□ 1.46
VAMP1-203ENST00000400911 SIGLEC1Q9BZZ2 1709 aa24.15■■□□□ 1.46
VAMP1-203ENST00000400911 FMN1Q68DA7 1419 aa24.14■■□□□ 1.45
VAMP1-203ENST00000400911 ATP10AO60312 1499 aa24.13■■□□□ 1.45
VAMP1-203ENST00000400911 CEBPAP49715 358 aaPredicted RBP24.11■■□□□ 1.45
VAMP1-203ENST00000400911 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
VAMP1-203ENST00000400911 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
VAMP1-203ENST00000400911 CERKQ8TCT0 537 aa24.09■■□□□ 1.45
VAMP1-203ENST00000400911 C9orf84Q5VXU9 1444 aa24.09■■□□□ 1.45
VAMP1-203ENST00000400911 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
VAMP1-203ENST00000400911 ARHGEF12Q9NZN5 1544 aa24.05■■□□□ 1.44
VAMP1-203ENST00000400911 TROQ12816 1431 aaPredicted RBP24.05■■□□□ 1.44
VAMP1-203ENST00000400911 ZNF518AQ6AHZ1 1483 aa24.02■■□□□ 1.44
VAMP1-203ENST00000400911 KIF14Q15058 1648 aa24.01■■□□□ 1.43
VAMP1-203ENST00000400911 CLIP1P30622 1438 aa24.01■■□□□ 1.43
VAMP1-203ENST00000400911 ARHGAP5Q13017 1502 aa24■■□□□ 1.43
VAMP1-203ENST00000400911 FER1L4A9Z1Z3 1794 aa23.99■■□□□ 1.43
VAMP1-203ENST00000400911 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
VAMP1-203ENST00000400911 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
VAMP1-203ENST00000400911 DMRT2Q9Y5R5 561 aa23.94■■□□□ 1.42
VAMP1-203ENST00000400911 KDM5CP41229 1560 aa23.93■■□□□ 1.42
VAMP1-203ENST00000400911 UHRF1BP1Q6BDS2 1440 aa23.91■■□□□ 1.42
VAMP1-203ENST00000400911 TRAPPC8Q9Y2L5 1435 aa23.91■■□□□ 1.42
VAMP1-203ENST00000400911 MLH3Q9UHC1 1453 aa23.9■■□□□ 1.42
VAMP1-203ENST00000400911 ESF1Q9H501 851 aaKnown RBP23.9■■□□□ 1.42
VAMP1-203ENST00000400911 DIP2CQ9Y2E4 1556 aa23.87■■□□□ 1.41
VAMP1-203ENST00000400911 PREX1Q8TCU6 1659 aa23.86■■□□□ 1.41
VAMP1-203ENST00000400911 CASKIN1Q8WXD9 1431 aa23.86■■□□□ 1.41
VAMP1-203ENST00000400911 REREQ9P2R6 1566 aa23.83■■□□□ 1.41
VAMP1-203ENST00000400911 ZNF777Q9ULD5 760 aaPredicted RBP23.83■■□□□ 1.41
VAMP1-203ENST00000400911 CCDC18Q5T9S5 1454 aa23.82■■□□□ 1.4
VAMP1-203ENST00000400911 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
VAMP1-203ENST00000400911 ABCC1P33527 1531 aa23.8■■□□□ 1.4
VAMP1-203ENST00000400911 AGLP35573 1532 aa23.8■■□□□ 1.4
VAMP1-203ENST00000400911 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
VAMP1-203ENST00000400911 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
VAMP1-203ENST00000400911 STRCQ7RTU9 1775 aa23.78■■□□□ 1.4
VAMP1-203ENST00000400911 HNRNPMP52272 730 aaKnown RBP eCLIP23.77■■□□□ 1.4
VAMP1-203ENST00000400911 PTPRTO14522 1441 aa23.76■■□□□ 1.39
VAMP1-203ENST00000400911 PREX2Q70Z35 1606 aa23.76■■□□□ 1.39
VAMP1-203ENST00000400911 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
VAMP1-203ENST00000400911 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
VAMP1-203ENST00000400911 C3P01024 1663 aa23.72■■□□□ 1.39
VAMP1-203ENST00000400911 ZMYM3Q14202 1370 aa23.71■■□□□ 1.39
VAMP1-203ENST00000400911 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
VAMP1-203ENST00000400911 GPATCH8Q9UKJ3 1502 aaKnown RBP23.7■■□□□ 1.38
VAMP1-203ENST00000400911 FYCO1Q9BQS8 1478 aa23.7■■□□□ 1.38
VAMP1-203ENST00000400911 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
VAMP1-203ENST00000400911 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.38
VAMP1-203ENST00000400911 SETD1BQ9UPS6 1966 aaKnown RBP23.69■■□□□ 1.38
VAMP1-203ENST00000400911 ILDR2Q71H61 639 aa23.69■■□□□ 1.38
VAMP1-203ENST00000400911 CFDP1Q9UEE9 299 aaPredicted RBP23.69■■□□□ 1.38
VAMP1-203ENST00000400911 SAMD9LQ8IVG5 1584 aa23.69■■□□□ 1.38
VAMP1-203ENST00000400911 NCOA1Q15788 1441 aa23.68■■□□□ 1.38
VAMP1-203ENST00000400911 NPATQ14207 1427 aa23.66■■□□□ 1.38
VAMP1-203ENST00000400911 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
VAMP1-203ENST00000400911 NCKAP5LQ9HCH0 1330 aa23.64■■□□□ 1.38
VAMP1-203ENST00000400911 CDC42BPAQ5VT25 1732 aa23.64■■□□□ 1.37
VAMP1-203ENST00000400911 GGT6Q6P531 493 aa23.63■■□□□ 1.37
VAMP1-203ENST00000400911 KIAA1107Q9UPP5 1409 aa23.63■■□□□ 1.37
VAMP1-203ENST00000400911 LTBP4Q8N2S1 1624 aa23.62■■□□□ 1.37
VAMP1-203ENST00000400911 CCNB3Q8WWL7 1395 aa23.62■■□□□ 1.37
VAMP1-203ENST00000400911 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
VAMP1-203ENST00000400911 A2MP01023 1474 aa23.58■■□□□ 1.37
VAMP1-203ENST00000400911 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.36
VAMP1-203ENST00000400911 PLEKHH2Q8IVE3 1493 aa23.57■■□□□ 1.36
VAMP1-203ENST00000400911 MTUS2Q5JR59 1369 aa23.57■■□□□ 1.36
VAMP1-203ENST00000400911 ATP7AQ04656 1500 aa23.57■■□□□ 1.36
VAMP1-203ENST00000400911 SOCS7O14512 581 aa23.56■■□□□ 1.36
VAMP1-203ENST00000400911 ZNF335Q9H4Z2 1342 aaPredicted RBP23.56■■□□□ 1.36
VAMP1-203ENST00000400911 PKD2Q13563 968 aa23.55■■□□□ 1.36
VAMP1-203ENST00000400911 PTPRKQ15262 1439 aa23.54■■□□□ 1.36
VAMP1-203ENST00000400911 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
VAMP1-203ENST00000400911 IQSEC2Q5JU85 1478 aa23.53■■□□□ 1.36
VAMP1-203ENST00000400911 SUPT6HQ7KZ85 1726 aaKnown RBP23.52■■□□□ 1.36
VAMP1-203ENST00000400911 PLXNC1O60486 1568 aa23.52■■□□□ 1.36
VAMP1-203ENST00000400911 MROH2AA6NES4 1674 aa23.51■■□□□ 1.35
VAMP1-203ENST00000400911 UBAP1LF5GYI3 381 aa23.5■■□□□ 1.35
VAMP1-203ENST00000400911 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
VAMP1-203ENST00000400911 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
VAMP1-203ENST00000400911 MBD5Q9P267 1494 aa23.47■■□□□ 1.35
VAMP1-203ENST00000400911 CLTCQ00610 1675 aaKnown RBP23.47■■□□□ 1.35
VAMP1-203ENST00000400911 TCOF1Q13428 1488 aaKnown RBP23.45■■□□□ 1.34
VAMP1-203ENST00000400911 DHX29Q7Z478 1369 aaKnown RBP23.44■■□□□ 1.34
VAMP1-203ENST00000400911 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
VAMP1-203ENST00000400911 SPATA31D1Q6ZQQ2 1576 aa23.43■■□□□ 1.34
VAMP1-203ENST00000400911 RTEL1-TNFRSF6BF6WH68 1400 aa23.42■■□□□ 1.34
VAMP1-203ENST00000400911 MYO3AQ8NEV4 1616 aa23.42■■□□□ 1.34
VAMP1-203ENST00000400911 KIF3BO15066 747 aa23.42■■□□□ 1.34
VAMP1-203ENST00000400911 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
VAMP1-203ENST00000400911 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
VAMP1-203ENST00000400911 CEP162Q5TB80 1403 aa23.39■■□□□ 1.33
VAMP1-203ENST00000400911 A2ML1A8K2U0 1454 aa23.38■■□□□ 1.33
VAMP1-203ENST00000400911 ZNF142P52746 1687 aaPredicted RBP23.37■■□□□ 1.33
VAMP1-203ENST00000400911 EHBP1L1Q8N3D4 1523 aa23.36■■□□□ 1.33
VAMP1-203ENST00000400911 TNRQ92752 1358 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms