RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 TNNT3P45378 269 aaPredicted RBP12.67□□□□□ -0.38
PTPRM-203ENST00000400060 ROCK2O75116 1388 aaKnown RBP12.67□□□□□ -0.38
PTPRM-203ENST00000400060 RGS3P49796 1198 aa12.66□□□□□ -0.38
PTPRM-203ENST00000400060 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
PTPRM-203ENST00000400060 RALBP1Q15311 655 aa12.65□□□□□ -0.38
PTPRM-203ENST00000400060 CHIC2Q9UKJ5 165 aa12.65□□□□□ -0.38
PTPRM-203ENST00000400060 HSPA5P11021 654 aaKnown RBP12.64□□□□□ -0.39
PTPRM-203ENST00000400060 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
PTPRM-203ENST00000400060 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
PTPRM-203ENST00000400060 SMG6Q86US8 1419 aaKnown RBP12.64□□□□□ -0.39
PTPRM-203ENST00000400060 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
PTPRM-203ENST00000400060 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
PTPRM-203ENST00000400060 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
PTPRM-203ENST00000400060 SYAP1Q96A49 352 aaPredicted RBP12.62□□□□□ -0.39
PTPRM-203ENST00000400060 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
PTPRM-203ENST00000400060 GOLGA6L6A8MZA4 724 aa12.61□□□□□ -0.39
PTPRM-203ENST00000400060 BACH2Q9BYV9 841 aa12.61□□□□□ -0.39
PTPRM-203ENST00000400060 CHMP4BQ9H444 224 aaKnown RBP12.61□□□□□ -0.39
PTPRM-203ENST00000400060 CNTLNQ9NXG0 1405 aa12.6□□□□□ -0.39
PTPRM-203ENST00000400060 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
PTPRM-203ENST00000400060 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
PTPRM-203ENST00000400060 SLKQ9H2G2 1235 aaPredicted RBP12.59□□□□□ -0.39
PTPRM-203ENST00000400060 WIZO95785 1651 aa12.59□□□□□ -0.39
PTPRM-203ENST00000400060 GZF1Q9H116 711 aaPredicted RBP12.59□□□□□ -0.39
PTPRM-203ENST00000400060 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
PTPRM-203ENST00000400060 CHMP5Q9NZZ3 219 aa12.59□□□□□ -0.39
PTPRM-203ENST00000400060 SMARCA2P51531 1590 aa12.59□□□□□ -0.39
PTPRM-203ENST00000400060 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
PTPRM-203ENST00000400060 PMFBP1Q8TBY8 1022 aa12.58□□□□□ -0.4
PTPRM-203ENST00000400060 TSPY4P0CV99 314 aa12.58□□□□□ -0.4
PTPRM-203ENST00000400060 TSPY10P0CW01 314 aa12.58□□□□□ -0.4
PTPRM-203ENST00000400060 ZNF771Q7L3S4 317 aaPredicted RBP12.58□□□□□ -0.4
PTPRM-203ENST00000400060 CLCN1P35523 988 aa12.57□□□□□ -0.4
PTPRM-203ENST00000400060 PRKRIP1Q9H875 184 aaPredicted RBP12.57□□□□□ -0.4
PTPRM-203ENST00000400060 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
PTPRM-203ENST00000400060 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
PTPRM-203ENST00000400060 CARMIL1Q5VZK9 1371 aa12.55□□□□□ -0.4
PTPRM-203ENST00000400060 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
PTPRM-203ENST00000400060 NRDCO43847 1150 aa12.55□□□□□ -0.4
PTPRM-203ENST00000400060 PHF14O94880 888 aa12.55□□□□□ -0.4
PTPRM-203ENST00000400060 HMGN5P82970 282 aaKnown RBP12.55□□□□□ -0.4
PTPRM-203ENST00000400060 RRP7BPQ9NSQ0 103 aa12.55□□□□□ -0.4
PTPRM-203ENST00000400060 ESPNB1AK53 854 aa12.54□□□□□ -0.4
PTPRM-203ENST00000400060 RRBP1Q9P2E9 1410 aaKnown RBP12.53□□□□□ -0.4
PTPRM-203ENST00000400060 AAMPQ13685 434 aa12.53□□□□□ -0.4
PTPRM-203ENST00000400060 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
PTPRM-203ENST00000400060 CUX2O14529 1486 aa12.53□□□□□ -0.4
PTPRM-203ENST00000400060 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
PTPRM-203ENST00000400060 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
PTPRM-203ENST00000400060 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
PTPRM-203ENST00000400060 CHMP7Q8WUX9 453 aaPredicted RBP12.52□□□□□ -0.41
PTPRM-203ENST00000400060 KIF21BO75037 1637 aa12.51□□□□□ -0.41
PTPRM-203ENST00000400060 RWDD1Q9H446 243 aaPredicted RBP12.51□□□□□ -0.41
PTPRM-203ENST00000400060 FRAT2O75474 233 aaPredicted RBP12.51□□□□□ -0.41
PTPRM-203ENST00000400060 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
PTPRM-203ENST00000400060 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
PTPRM-203ENST00000400060 CALRP27797 417 aaKnown RBP12.5□□□□□ -0.41
PTPRM-203ENST00000400060 KIAA1211Q6ZU35 1233 aa12.49□□□□□ -0.41
PTPRM-203ENST00000400060 SMAP1Q8IYB5 467 aaPredicted RBP12.49□□□□□ -0.41
PTPRM-203ENST00000400060 TAF7LQ5H9L4 462 aa12.48□□□□□ -0.41
PTPRM-203ENST00000400060 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
PTPRM-203ENST00000400060 MYBBP1AQ9BQG0 1328 aaKnown RBP12.48□□□□□ -0.41
PTPRM-203ENST00000400060 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
PTPRM-203ENST00000400060 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
PTPRM-203ENST00000400060 R3HCC1Q9Y3T6 440 aaKnown RBP12.47□□□□□ -0.41
PTPRM-203ENST00000400060 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
PTPRM-203ENST00000400060 SMARCA4P51532 1647 aa12.47□□□□□ -0.41
PTPRM-203ENST00000400060 TPM3P06753 285 aa12.47□□□□□ -0.41
PTPRM-203ENST00000400060 TRAK2O60296 914 aa12.46□□□□□ -0.41
PTPRM-203ENST00000400060 PLEKHD1A6NEE1 506 aa12.46□□□□□ -0.42
PTPRM-203ENST00000400060 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.42
PTPRM-203ENST00000400060 FTSJ3Q8IY81 847 aaKnown RBP12.46□□□□□ -0.42
PTPRM-203ENST00000400060 NASPP49321 788 aaPredicted RBP12.45□□□□□ -0.42
PTPRM-203ENST00000400060 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
PTPRM-203ENST00000400060 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
PTPRM-203ENST00000400060 TEX35Q5T0J7 233 aa12.45□□□□□ -0.42
PTPRM-203ENST00000400060 ZSCAN30Q86W11 494 aa12.45□□□□□ -0.42
PTPRM-203ENST00000400060 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
PTPRM-203ENST00000400060 ARID3AQ99856 593 aa12.45□□□□□ -0.42
PTPRM-203ENST00000400060 APPP05067 770 aa12.45□□□□□ -0.42
PTPRM-203ENST00000400060 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
PTPRM-203ENST00000400060 KANK4Q5T7N3 995 aaPredicted RBP12.45□□□□□ -0.42
PTPRM-203ENST00000400060 TERF1P54274 439 aa12.44□□□□□ -0.42
PTPRM-203ENST00000400060 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
PTPRM-203ENST00000400060 CGNL1Q0VF96 1302 aa12.44□□□□□ -0.42
PTPRM-203ENST00000400060 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
PTPRM-203ENST00000400060 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
PTPRM-203ENST00000400060 CFDP1Q9UEE9 299 aaPredicted RBP12.43□□□□□ -0.42
PTPRM-203ENST00000400060 DYNC1I1O14576 645 aa12.43□□□□□ -0.42
PTPRM-203ENST00000400060 PDCL2Q8N4E4 241 aa12.43□□□□□ -0.42
PTPRM-203ENST00000400060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■■■□□ 15.5
PTPRM-203ENST00000400060 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
PTPRM-203ENST00000400060 MCM5P33992 734 aa12.43□□□□□ -0.42
PTPRM-203ENST00000400060 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
PTPRM-203ENST00000400060 UQCRHLA0A096LP55 91 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 UQCRHP07919 91 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 KIF16BQ96L93 1317 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
PTPRM-203ENST00000400060 DDX49Q9Y6V7 483 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms