RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CHIC2Q9UKJ5 165 aa35.97■■■■□ 3.35
COL13A1-203ENST00000398969 CDK11AQ9UQ88 783 aaPredicted RBP35.97■■■■□ 3.35
COL13A1-203ENST00000398969 MIA2Q96PC5 1412 aa35.97■■■■□ 3.35
COL13A1-203ENST00000398969 TSHZ2Q9NRE2 1034 aa35.96■■■■□ 3.35
COL13A1-203ENST00000398969 KDM6BO15054 1643 aa35.94■■■■□ 3.34
COL13A1-203ENST00000398969 ABCA8O94911 1581 aa35.91■■■■□ 3.34
COL13A1-203ENST00000398969 FKBP8Q14318 412 aa35.91■■■■□ 3.34
COL13A1-203ENST00000398969 TRIM52Q96A61 297 aa35.89■■■■□ 3.34
COL13A1-203ENST00000398969 SHROOM2Q13796 1616 aa35.86■■■■□ 3.33
COL13A1-203ENST00000398969 TROQ12816 1431 aaPredicted RBP35.85■■■■□ 3.33
COL13A1-203ENST00000398969 BCANQ96GW7 911 aa35.85■■■■□ 3.33
COL13A1-203ENST00000398969 PTPRGP23470 1445 aa35.83■■■■□ 3.33
COL13A1-203ENST00000398969 MPHOSPH9Q99550 1183 aa35.79■■■■□ 3.32
COL13A1-203ENST00000398969 HSPA5P11021 654 aaKnown RBP35.77■■■■□ 3.32
COL13A1-203ENST00000398969 NEFLP07196 543 aa35.76■■■■□ 3.31
COL13A1-203ENST00000398969 ATP10BO94823 1461 aa35.75■■■■□ 3.31
COL13A1-203ENST00000398969 WASHC2AQ641Q2 1341 aa35.74■■■■□ 3.31
COL13A1-203ENST00000398969 DAPK1P53355 1430 aa35.72■■■■□ 3.31
COL13A1-203ENST00000398969 ADCY10Q96PN6 1610 aa35.71■■■■□ 3.31
COL13A1-203ENST00000398969 ROCK1Q13464 1354 aa35.71■■■■□ 3.31
COL13A1-203ENST00000398969 DNMT1P26358 1616 aaKnown RBP35.69■■■■□ 3.3
COL13A1-203ENST00000398969 CLASP1Q7Z460 1538 aa35.68■■■■□ 3.3
COL13A1-203ENST00000398969 EIF4G2P78344 907 aaKnown RBP eCLIP35.68■■■■□ 3.3
COL13A1-203ENST00000398969 KIF14Q15058 1648 aa35.68■■■■□ 3.3
COL13A1-203ENST00000398969 PLEKHD1A6NEE1 506 aa35.67■■■■□ 3.3
COL13A1-203ENST00000398969 L3MBTL2Q969R5 705 aa35.66■■■■□ 3.3
COL13A1-203ENST00000398969 ERCC6L2Q5T890 1561 aa35.65■■■■□ 3.3
COL13A1-203ENST00000398969 ABCC5O15440 1437 aa35.65■■■■□ 3.3
COL13A1-203ENST00000398969 FOXD1Q16676 465 aa35.63■■■■□ 3.29
COL13A1-203ENST00000398969 GPATCH8Q9UKJ3 1502 aaKnown RBP35.61■■■■□ 3.29
COL13A1-203ENST00000398969 ANKRD30BQ9BXX2 1392 aa35.6■■■■□ 3.29
COL13A1-203ENST00000398969 ITSN2Q9NZM3 1697 aa35.6■■■■□ 3.29
COL13A1-203ENST00000398969 ZNF644Q9H582 1327 aaPredicted RBP35.59■■■■□ 3.29
COL13A1-203ENST00000398969 RPRD2Q5VT52 1461 aaKnown RBP35.59■■■■□ 3.29
COL13A1-203ENST00000398969 CNTLNQ9NXG0 1405 aa35.58■■■■□ 3.29
COL13A1-203ENST00000398969 CFDP1Q9UEE9 299 aaPredicted RBP35.57■■■■□ 3.28
COL13A1-203ENST00000398969 TEX14Q8IWB6 1497 aa35.54■■■■□ 3.28
COL13A1-203ENST00000398969 HNRNPUQ00839 825 aaKnown RBP eCLIP35.54■■■■□ 3.28
COL13A1-203ENST00000398969 NCOA1Q15788 1441 aa35.53■■■■□ 3.28
COL13A1-203ENST00000398969 ABCC10Q5T3U5 1492 aa35.51■■■■□ 3.28
COL13A1-203ENST00000398969 CAMSAP2Q08AD1 1489 aa35.5■■■■□ 3.27
COL13A1-203ENST00000398969 CCDC7Q96M83 1385 aa35.48■■■■□ 3.27
COL13A1-203ENST00000398969 ABCC2Q92887 1545 aa35.47■■■■□ 3.27
COL13A1-203ENST00000398969 C11orf95C9JLR9 678 aaPredicted RBP35.46■■■■□ 3.27
COL13A1-203ENST00000398969 NBPF8Q3BBV2 869 aa35.46■■■■□ 3.27
COL13A1-203ENST00000398969 CDC42BPAQ5VT25 1732 aa35.45■■■■□ 3.26
COL13A1-203ENST00000398969 SLC4A1APQ9BWU0 796 aaKnown RBP35.44■■■■□ 3.26
COL13A1-203ENST00000398969 ZNF777Q9ULD5 760 aaPredicted RBP35.41■■■■□ 3.26
COL13A1-203ENST00000398969 PZPP20742 1482 aa35.38■■■■□ 3.25
COL13A1-203ENST00000398969 SPATA31E1Q6ZUB1 1445 aa35.38■■■■□ 3.25
COL13A1-203ENST00000398969 ADGBQ8N7X0 1667 aa35.36■■■■□ 3.25
COL13A1-203ENST00000398969 PRKRIP1Q9H875 184 aaPredicted RBP35.36■■■■□ 3.25
COL13A1-203ENST00000398969 CCDC184Q52MB2 194 aa35.35■■■■□ 3.25
COL13A1-203ENST00000398969 POLR1AO95602 1720 aaPredicted RBP35.35■■■■□ 3.25
COL13A1-203ENST00000398969 UHRF1BP1LA0JNW5 1464 aa35.31■■■■□ 3.24
COL13A1-203ENST00000398969 ADGRL2O95490 1459 aa35.29■■■■□ 3.24
COL13A1-203ENST00000398969 CROCC2H7BZ55 1655 aa35.29■■■■□ 3.24
COL13A1-203ENST00000398969 KIF7Q2M1P5 1343 aa35.29■■■■□ 3.24
COL13A1-203ENST00000398969 RBM19Q9Y4C8 960 aaKnown RBP35.26■■■■□ 3.24
COL13A1-203ENST00000398969 ANP32EQ9BTT0 268 aa35.25■■■■□ 3.23
COL13A1-203ENST00000398969 MBD5Q9P267 1494 aa35.24■■■■□ 3.23
COL13A1-203ENST00000398969 KIAA1107Q9UPP5 1409 aa35.22■■■■□ 3.23
COL13A1-203ENST00000398969 ZCCHC11Q5TAX3 1644 aaKnown RBP35.21■■■■□ 3.23
COL13A1-203ENST00000398969 PREX2Q70Z35 1606 aa35.21■■■■□ 3.23
COL13A1-203ENST00000398969 CDC42BPBQ9Y5S2 1711 aa35.21■■■■□ 3.23
COL13A1-203ENST00000398969 MRS2Q9HD23 443 aa35.2■■■■□ 3.23
COL13A1-203ENST00000398969 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.19■■■■□ 3.22
COL13A1-203ENST00000398969 TTC37Q6PGP7 1564 aa35.17■■■■□ 3.22
COL13A1-203ENST00000398969 IRX6P78412 446 aaPredicted RBP35.17■■■■□ 3.22
COL13A1-203ENST00000398969 FAM9BQ8IZU0 186 aa35.16■■■■□ 3.22
COL13A1-203ENST00000398969 ANKRD30AQ9BXX3 1397 aa35.16■■■■□ 3.22
COL13A1-203ENST00000398969 SHANK2Q9UPX8 1470 aa35.15■■■■□ 3.22
COL13A1-203ENST00000398969 OSCARQ8IYS5 282 aa35.14■■■■□ 3.22
COL13A1-203ENST00000398969 SAMD9LQ8IVG5 1584 aa35.12■■■■□ 3.21
COL13A1-203ENST00000398969 ZBED9Q6R2W3 1325 aa35.12■■■■□ 3.21
COL13A1-203ENST00000398969 ERICH6BQ5W0A0 696 aa35.12■■■■□ 3.21
COL13A1-203ENST00000398969 ARHGEF5Q12774 1597 aa35.12■■■■□ 3.21
COL13A1-203ENST00000398969 HNRNPMP52272 730 aaKnown RBP eCLIP35.11■■■■□ 3.21
COL13A1-203ENST00000398969 C9orf84Q5VXU9 1444 aa35.1■■■■□ 3.21
COL13A1-203ENST00000398969 PKD2Q13563 968 aa35.1■■■■□ 3.21
COL13A1-203ENST00000398969 ANKRD50Q9ULJ7 1429 aa35.1■■■■□ 3.21
COL13A1-203ENST00000398969 TSPY4P0CV99 314 aa35.08■■■■□ 3.21
COL13A1-203ENST00000398969 TSPY10P0CW01 314 aa35.08■■■■□ 3.21
COL13A1-203ENST00000398969 USP47Q96K76 1375 aa35.07■■■■□ 3.2
COL13A1-203ENST00000398969 ARHGAP5Q13017 1502 aa35.06■■■■□ 3.2
COL13A1-203ENST00000398969 BCORL1Q5H9F3 1711 aa35.06■■■■□ 3.2
COL13A1-203ENST00000398969 MYO5CQ9NQX4 1742 aa35.05■■■■□ 3.2
COL13A1-203ENST00000398969 DHX29Q7Z478 1369 aaKnown RBP35.04■■■■□ 3.2
COL13A1-203ENST00000398969 KDM5CP41229 1560 aa35.02■■■■□ 3.2
COL13A1-203ENST00000398969 RSPH4AQ5TD94 716 aa35.02■■■■□ 3.2
COL13A1-203ENST00000398969 CCDC141Q6ZP82 1450 aa35.02■■■■□ 3.2
COL13A1-203ENST00000398969 ZNF326Q5BKZ1 582 aaKnown RBP34.99■■■■□ 3.19
COL13A1-203ENST00000398969 PPP4R2Q9NY27 417 aa34.98■■■■□ 3.19
COL13A1-203ENST00000398969 UHRF1BP1Q6BDS2 1440 aa34.98■■■■□ 3.19
COL13A1-203ENST00000398969 PLCH2O75038 1416 aa34.96■■■■□ 3.19
COL13A1-203ENST00000398969 SYCP2Q9BX26 1530 aa34.96■■■■□ 3.19
COL13A1-203ENST00000398969 ARID4BQ4LE39 1312 aaPredicted RBP34.95■■■■□ 3.19
COL13A1-203ENST00000398969 NUP155O75694 1391 aa34.94■■■■□ 3.18
COL13A1-203ENST00000398969 KDM5DQ9BY66 1539 aa34.94■■■■□ 3.18
COL13A1-203ENST00000398969 RALGAPBQ86X10 1494 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms