RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 MTERF4Q7Z6M4 381 aaKnown RBP16.84■□□□□ 0.29
USP19-202ENST00000398888 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.83■□□□□ 0.28
USP19-202ENST00000398888 ARID3CA6NKF2 412 aa16.82■□□□□ 0.28
USP19-202ENST00000398888 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
USP19-202ENST00000398888 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
USP19-202ENST00000398888 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
USP19-202ENST00000398888 PDIA4P13667 645 aaKnown RBP16.79■□□□□ 0.28
USP19-202ENST00000398888 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
USP19-202ENST00000398888 RBM10P98175 930 aaKnown RBP16.77■□□□□ 0.28
USP19-202ENST00000398888 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.27
USP19-202ENST00000398888 ZNF777Q9ULD5 760 aaPredicted RBP16.77■□□□□ 0.27
USP19-202ENST00000398888 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
USP19-202ENST00000398888 NRDCO43847 1150 aa16.74■□□□□ 0.27
USP19-202ENST00000398888 CUX2O14529 1486 aa16.74■□□□□ 0.27
USP19-202ENST00000398888 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
USP19-202ENST00000398888 R3HCC1Q9Y3T6 440 aaKnown RBP16.74■□□□□ 0.27
USP19-202ENST00000398888 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
USP19-202ENST00000398888 DRC7Q8IY82 874 aa16.72■□□□□ 0.27
USP19-202ENST00000398888 KIF21BO75037 1637 aa16.71■□□□□ 0.27
USP19-202ENST00000398888 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
USP19-202ENST00000398888 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
USP19-202ENST00000398888 DDX11L8A8MPP1 907 aa16.69■□□□□ 0.26
USP19-202ENST00000398888 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
USP19-202ENST00000398888 CCDC66A2RUB6 948 aa16.68■□□□□ 0.26
USP19-202ENST00000398888 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
USP19-202ENST00000398888 CALRP27797 417 aaKnown RBP16.67■□□□□ 0.26
USP19-202ENST00000398888 GOLGA6L1Q8N7Z2 621 aa16.67■□□□□ 0.26
USP19-202ENST00000398888 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
USP19-202ENST00000398888 MRE11P49959 708 aa16.65■□□□□ 0.26
USP19-202ENST00000398888 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
USP19-202ENST00000398888 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
USP19-202ENST00000398888 ATAD2BQ9ULI0 1458 aa16.63■□□□□ 0.25
USP19-202ENST00000398888 FRAT2O75474 233 aaPredicted RBP16.62■□□□□ 0.25
USP19-202ENST00000398888 MS4A1P11836 297 aa16.62■□□□□ 0.25
USP19-202ENST00000398888 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
USP19-202ENST00000398888 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
USP19-202ENST00000398888 FBLN2P98095 1184 aa16.61■□□□□ 0.25
USP19-202ENST00000398888 TSPY4P0CV99 314 aa16.61■□□□□ 0.25
USP19-202ENST00000398888 TSPY10P0CW01 314 aa16.61■□□□□ 0.25
USP19-202ENST00000398888 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
USP19-202ENST00000398888 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
USP19-202ENST00000398888 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
USP19-202ENST00000398888 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
USP19-202ENST00000398888 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
USP19-202ENST00000398888 FAM161AQ3B820 660 aa16.59■□□□□ 0.25
USP19-202ENST00000398888 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.25
USP19-202ENST00000398888 SYAP1Q96A49 352 aaPredicted RBP16.58■□□□□ 0.25
USP19-202ENST00000398888 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.25
USP19-202ENST00000398888 SKOR2Q2VWA4 1001 aaPredicted RBP16.58■□□□□ 0.24
USP19-202ENST00000398888 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
USP19-202ENST00000398888 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
USP19-202ENST00000398888 FTSJ3Q8IY81 847 aaKnown RBP16.57■□□□□ 0.24
USP19-202ENST00000398888 ESPNB1AK53 854 aa16.57■□□□□ 0.24
USP19-202ENST00000398888 TAF3Q5VWG9 929 aa16.57■□□□□ 0.24
USP19-202ENST00000398888 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
USP19-202ENST00000398888 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
USP19-202ENST00000398888 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
USP19-202ENST00000398888 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
USP19-202ENST00000398888 TEX35Q5T0J7 233 aa16.53■□□□□ 0.24
USP19-202ENST00000398888 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
USP19-202ENST00000398888 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
USP19-202ENST00000398888 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
USP19-202ENST00000398888 NOM1Q5C9Z4 860 aaKnown RBP16.51■□□□□ 0.23
USP19-202ENST00000398888 GPS2Q13227 327 aa16.5■□□□□ 0.23
USP19-202ENST00000398888 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
USP19-202ENST00000398888 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
USP19-202ENST00000398888 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
USP19-202ENST00000398888 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
USP19-202ENST00000398888 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
USP19-202ENST00000398888 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
USP19-202ENST00000398888 PLCD3Q8N3E9 789 aa16.48■□□□□ 0.23
USP19-202ENST00000398888 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
USP19-202ENST00000398888 UQCRHP07919 91 aa16.48■□□□□ 0.23
USP19-202ENST00000398888 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
USP19-202ENST00000398888 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
USP19-202ENST00000398888 NASPP49321 788 aaPredicted RBP16.47■□□□□ 0.23
USP19-202ENST00000398888 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
USP19-202ENST00000398888 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
USP19-202ENST00000398888 FHOD3Q2V2M9 1422 aa16.46■□□□□ 0.23
USP19-202ENST00000398888 L3MBTL2Q969R5 705 aa16.46■□□□□ 0.22
USP19-202ENST00000398888 ARAP1Q96P48 1450 aa16.46■□□□□ 0.22
USP19-202ENST00000398888 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
USP19-202ENST00000398888 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
USP19-202ENST00000398888 DIAPH3Q9NSV4 1193 aa16.45■□□□□ 0.22
USP19-202ENST00000398888 CCDC18Q5T9S5 1454 aa16.44■□□□□ 0.22
USP19-202ENST00000398888 E9PSI1 815 aa16.44■□□□□ 0.22
USP19-202ENST00000398888 CHMP4AQ9BY43 222 aa16.44■□□□□ 0.22
USP19-202ENST00000398888 TRAK2O60296 914 aa16.44■□□□□ 0.22
USP19-202ENST00000398888 PRXQ9BXM0 1461 aa16.43■□□□□ 0.22
USP19-202ENST00000398888 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
USP19-202ENST00000398888 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
USP19-202ENST00000398888 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
USP19-202ENST00000398888 PHF14O94880 888 aa16.42■□□□□ 0.22
USP19-202ENST00000398888 ZNF592Q92610 1267 aa16.41■□□□□ 0.22
USP19-202ENST00000398888 PHLDB1Q86UU1 1377 aa16.41■□□□□ 0.22
USP19-202ENST00000398888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP19-202ENST00000398888 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
USP19-202ENST00000398888 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
USP19-202ENST00000398888 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
USP19-202ENST00000398888 CWC15Q9P013 229 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms