RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ADGRL1O94910 1474 aa22.55■■□□□ 1.2
HDDC2-202ENST00000398153 RAPGEF3O95398 923 aa22.54■■□□□ 1.2
HDDC2-202ENST00000398153 CDC42BPAQ5VT25 1732 aa22.53■■□□□ 1.2
HDDC2-202ENST00000398153 RICTORQ6R327 1708 aa22.53■■□□□ 1.2
HDDC2-202ENST00000398153 SCAPERQ9BY12 1400 aa22.52■■□□□ 1.2
HDDC2-202ENST00000398153 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.19
HDDC2-202ENST00000398153 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
HDDC2-202ENST00000398153 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
HDDC2-202ENST00000398153 POGZQ7Z3K3 1410 aa22.48■■□□□ 1.19
HDDC2-202ENST00000398153 SUPT6HQ7KZ85 1726 aaKnown RBP22.48■■□□□ 1.19
HDDC2-202ENST00000398153 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
HDDC2-202ENST00000398153 MAGI2Q86UL8 1455 aa22.48■■□□□ 1.19
HDDC2-202ENST00000398153 ZMYM4Q5VZL5 1548 aa22.48■■□□□ 1.19
HDDC2-202ENST00000398153 APLP2Q06481 763 aa22.48■■□□□ 1.19
HDDC2-202ENST00000398153 ZNF518AQ6AHZ1 1483 aa22.46■■□□□ 1.19
HDDC2-202ENST00000398153 CFDP1Q9UEE9 299 aaPredicted RBP22.45■■□□□ 1.18
HDDC2-202ENST00000398153 ITSN2Q9NZM3 1697 aa22.45■■□□□ 1.18
HDDC2-202ENST00000398153 ABCC1P33527 1531 aa22.43■■□□□ 1.18
HDDC2-202ENST00000398153 PLEKHH2Q8IVE3 1493 aa22.43■■□□□ 1.18
HDDC2-202ENST00000398153 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
HDDC2-202ENST00000398153 KIAA1107Q9UPP5 1409 aa22.41■■□□□ 1.18
HDDC2-202ENST00000398153 KDM5CP41229 1560 aa22.4■■□□□ 1.18
HDDC2-202ENST00000398153 ARHGEF40Q8TER5 1519 aa22.39■■□□□ 1.17
HDDC2-202ENST00000398153 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
HDDC2-202ENST00000398153 ZFYVE16Q7Z3T8 1539 aa22.37■■□□□ 1.17
HDDC2-202ENST00000398153 KANK4Q5T7N3 995 aaPredicted RBP22.37■■□□□ 1.17
HDDC2-202ENST00000398153 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
HDDC2-202ENST00000398153 AFAP1Q8N556 730 aa22.36■■□□□ 1.17
HDDC2-202ENST00000398153 ARHGEF12Q9NZN5 1544 aa22.36■■□□□ 1.17
HDDC2-202ENST00000398153 MLH3Q9UHC1 1453 aa22.35■■□□□ 1.17
HDDC2-202ENST00000398153 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
HDDC2-202ENST00000398153 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
HDDC2-202ENST00000398153 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.16
HDDC2-202ENST00000398153 TRAPPC8Q9Y2L5 1435 aa22.32■■□□□ 1.16
HDDC2-202ENST00000398153 SYCP2Q9BX26 1530 aa22.31■■□□□ 1.16
HDDC2-202ENST00000398153 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
HDDC2-202ENST00000398153 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
HDDC2-202ENST00000398153 ATP10AO60312 1499 aa22.3■■□□□ 1.16
HDDC2-202ENST00000398153 MIA2Q96PC5 1412 aa22.3■■□□□ 1.16
HDDC2-202ENST00000398153 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.16
HDDC2-202ENST00000398153 MYOM3Q5VTT5 1437 aa22.28■■□□□ 1.16
HDDC2-202ENST00000398153 C9orf84Q5VXU9 1444 aa22.27■■□□□ 1.16
HDDC2-202ENST00000398153 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
HDDC2-202ENST00000398153 MBD5Q9P267 1494 aa22.26■■□□□ 1.15
HDDC2-202ENST00000398153 REREQ9P2R6 1566 aa22.25■■□□□ 1.15
HDDC2-202ENST00000398153 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
HDDC2-202ENST00000398153 ARID4BQ4LE39 1312 aaPredicted RBP22.25■■□□□ 1.15
HDDC2-202ENST00000398153 ZNF644Q9H582 1327 aaPredicted RBP22.25■■□□□ 1.15
HDDC2-202ENST00000398153 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
HDDC2-202ENST00000398153 KIDINS220Q9ULH0 1771 aa22.23■■□□□ 1.15
HDDC2-202ENST00000398153 BCORL1Q5H9F3 1711 aa22.23■■□□□ 1.15
HDDC2-202ENST00000398153 DIP2CQ9Y2E4 1556 aa22.22■■□□□ 1.15
HDDC2-202ENST00000398153 RTEL1-TNFRSF6BF6WH68 1400 aa22.21■■□□□ 1.15
HDDC2-202ENST00000398153 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
HDDC2-202ENST00000398153 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.15
HDDC2-202ENST00000398153 ATP7AQ04656 1500 aa22.2■■□□□ 1.14
HDDC2-202ENST00000398153 ABCA6Q8N139 1617 aa22.2■■□□□ 1.14
HDDC2-202ENST00000398153 CCDC141Q6ZP82 1450 aa22.19■■□□□ 1.14
HDDC2-202ENST00000398153 INO80Q9ULG1 1556 aaPredicted RBP22.19■■□□□ 1.14
HDDC2-202ENST00000398153 AGLP35573 1532 aa22.16■■□□□ 1.14
HDDC2-202ENST00000398153 SIGLEC1Q9BZZ2 1709 aa22.15■■□□□ 1.14
HDDC2-202ENST00000398153 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
HDDC2-202ENST00000398153 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
HDDC2-202ENST00000398153 FGD6Q6ZV73 1430 aa22.13■■□□□ 1.13
HDDC2-202ENST00000398153 ADGBQ8N7X0 1667 aa22.11■■□□□ 1.13
HDDC2-202ENST00000398153 PTPN23Q9H3S7 1636 aa22.11■■□□□ 1.13
HDDC2-202ENST00000398153 TCOF1Q13428 1488 aaKnown RBP22.1■■□□□ 1.13
HDDC2-202ENST00000398153 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
HDDC2-202ENST00000398153 A2MP01023 1474 aa22.09■■□□□ 1.13
HDDC2-202ENST00000398153 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.13
HDDC2-202ENST00000398153 PTPRMP28827 1452 aa22.08■■□□□ 1.12
HDDC2-202ENST00000398153 PLXNC1O60486 1568 aa22.08■■□□□ 1.12
HDDC2-202ENST00000398153 MLECQ14165 292 aa22.05■■□□□ 1.12
HDDC2-202ENST00000398153 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
HDDC2-202ENST00000398153 FER1L4A9Z1Z3 1794 aa22.04■■□□□ 1.12
HDDC2-202ENST00000398153 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
HDDC2-202ENST00000398153 RIMS1Q86UR5 1692 aaKnown RBP22.02■■□□□ 1.12
HDDC2-202ENST00000398153 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
HDDC2-202ENST00000398153 DNMT1P26358 1616 aaKnown RBP22.02■■□□□ 1.11
HDDC2-202ENST00000398153 ABCC5O15440 1437 aa21.99■■□□□ 1.11
HDDC2-202ENST00000398153 DAPK1P53355 1430 aa21.99■■□□□ 1.11
HDDC2-202ENST00000398153 CROCC2H7BZ55 1655 aa21.99■■□□□ 1.11
HDDC2-202ENST00000398153 ESF1Q9H501 851 aaKnown RBP21.99■■□□□ 1.11
HDDC2-202ENST00000398153 CNTLNQ9NXG0 1405 aa21.98■■□□□ 1.11
HDDC2-202ENST00000398153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.12e-9■□□□□ 11.3
HDDC2-202ENST00000398153 FAM50AQ14320 339 aaKnown RBP21.93■■□□□ 1.1
HDDC2-202ENST00000398153 DUOX2Q9NRD8 1548 aa21.92■■□□□ 1.1
HDDC2-202ENST00000398153 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
HDDC2-202ENST00000398153 MROH2AA6NES4 1674 aa21.91■■□□□ 1.1
HDDC2-202ENST00000398153 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
HDDC2-202ENST00000398153 ANKRD30AQ9BXX3 1397 aa21.9■■□□□ 1.1
HDDC2-202ENST00000398153 KIF3BO15066 747 aa21.9■■□□□ 1.1
HDDC2-202ENST00000398153 GGT6Q6P531 493 aa21.9■■□□□ 1.1
HDDC2-202ENST00000398153 KIF15Q9NS87 1388 aa21.88■■□□□ 1.09
HDDC2-202ENST00000398153 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
HDDC2-202ENST00000398153 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
HDDC2-202ENST00000398153 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
HDDC2-202ENST00000398153 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
HDDC2-202ENST00000398153 ZMYM3Q14202 1370 aa21.85■■□□□ 1.09
HDDC2-202ENST00000398153 C3P01024 1663 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms