RNA–Protein interactions for RNA: ENST00000397090.4

FGFR1-205, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-205ENST00000397090 ABCA9Q8IUA7 1624 aa34.03■■■■□ 3.04
FGFR1-205ENST00000397090 TROQ12816 1431 aaPredicted RBP34.01■■■■□ 3.03
FGFR1-205ENST00000397090 FRMPD1Q5SYB0 1578 aa33.98■■■■□ 3.03
FGFR1-205ENST00000397090 ARHGEF40Q8TER5 1519 aa33.91■■■■□ 3.02
FGFR1-205ENST00000397090 PLPPR3Q6T4P5 718 aa33.91■■■■□ 3.02
FGFR1-205ENST00000397090 KIF14Q15058 1648 aa33.88■■■■□ 3.01
FGFR1-205ENST00000397090 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.88■■■■□ 3.01
FGFR1-205ENST00000397090 POGZQ7Z3K3 1410 aa33.86■■■■□ 3.01
FGFR1-205ENST00000397090 MAP3K1Q13233 1512 aa33.85■■■■□ 3.01
FGFR1-205ENST00000397090 TIAM1Q13009 1591 aa33.84■■■■□ 3.01
FGFR1-205ENST00000397090 MTUS2Q5JR59 1369 aa33.84■■■■□ 3.01
FGFR1-205ENST00000397090 SPATA31D1Q6ZQQ2 1576 aa33.83■■■■□ 3.01
FGFR1-205ENST00000397090 TTC37Q6PGP7 1564 aa33.81■■■■□ 3
FGFR1-205ENST00000397090 FANCAO15360 1455 aa33.81■■■■□ 3
FGFR1-205ENST00000397090 EHBP1L1Q8N3D4 1523 aa33.79■■■■□ 3
FGFR1-205ENST00000397090 DENND4BO75064 1496 aaPredicted RBP33.77■■■■□ 3
FGFR1-205ENST00000397090 AKNAQ7Z591 1439 aa33.76■■■□□ 2.99
FGFR1-205ENST00000397090 APLP2Q06481 763 aa33.75■■■□□ 2.99
FGFR1-205ENST00000397090 PLCH2O75038 1416 aa33.73■■■□□ 2.99
FGFR1-205ENST00000397090 RICTORQ6R327 1708 aa33.73■■■□□ 2.99
FGFR1-205ENST00000397090 LRRC9Q6ZRR7 1453 aa33.7■■■□□ 2.99
FGFR1-205ENST00000397090 DMRT2Q9Y5R5 561 aa33.7■■■□□ 2.99
FGFR1-205ENST00000397090 YEATS2Q9ULM3 1422 aa33.69■■■□□ 2.98
FGFR1-205ENST00000397090 MYO5CQ9NQX4 1742 aa33.65■■■□□ 2.98
FGFR1-205ENST00000397090 MLECQ14165 292 aa33.64■■■□□ 2.98
FGFR1-205ENST00000397090 FER1L4A9Z1Z3 1794 aa33.64■■■□□ 2.98
FGFR1-205ENST00000397090 CFAP74Q9C0B2 1584 aa33.64■■■□□ 2.98
FGFR1-205ENST00000397090 ZMYM4Q5VZL5 1548 aa33.63■■■□□ 2.97
FGFR1-205ENST00000397090 ZFYVE16Q7Z3T8 1539 aa33.63■■■□□ 2.97
FGFR1-205ENST00000397090 SIGLEC1Q9BZZ2 1709 aa33.63■■■□□ 2.97
FGFR1-205ENST00000397090 PREX1Q8TCU6 1659 aa33.61■■■□□ 2.97
FGFR1-205ENST00000397090 KANK4Q5T7N3 995 aaPredicted RBP33.61■■■□□ 2.97
FGFR1-205ENST00000397090 EFCAB2Q5VUJ9 269 aa33.61■■■□□ 2.97
FGFR1-205ENST00000397090 SUPT6HQ7KZ85 1726 aaKnown RBP33.59■■■□□ 2.97
FGFR1-205ENST00000397090 CCNB3Q8WWL7 1395 aa33.59■■■□□ 2.97
FGFR1-205ENST00000397090 MAGI2Q86UL8 1455 aa33.58■■■□□ 2.97
FGFR1-205ENST00000397090 ARHGAP5Q13017 1502 aa33.58■■■□□ 2.97
FGFR1-205ENST00000397090 GPATCH8Q9UKJ3 1502 aaKnown RBP33.58■■■□□ 2.97
FGFR1-205ENST00000397090 PREX2Q70Z35 1606 aa33.57■■■□□ 2.97
FGFR1-205ENST00000397090 NCOA2Q15596 1464 aa33.57■■■□□ 2.97
FGFR1-205ENST00000397090 STRCQ7RTU9 1775 aa33.55■■■□□ 2.96
FGFR1-205ENST00000397090 CDC42BPAQ5VT25 1732 aa33.52■■■□□ 2.96
FGFR1-205ENST00000397090 CDC42BPBQ9Y5S2 1711 aa33.5■■■□□ 2.95
FGFR1-205ENST00000397090 ARHGEF12Q9NZN5 1544 aa33.5■■■□□ 2.95
FGFR1-205ENST00000397090 CFDP1Q9UEE9 299 aaPredicted RBP33.47■■■□□ 2.95
FGFR1-205ENST00000397090 CEBPAP49715 358 aaPredicted RBP33.46■■■□□ 2.95
FGFR1-205ENST00000397090 ITSN2Q9NZM3 1697 aa33.45■■■□□ 2.95
FGFR1-205ENST00000397090 UHRF1BP1Q6BDS2 1440 aa33.45■■■□□ 2.94
FGFR1-205ENST00000397090 PTPRTO14522 1441 aa33.44■■■□□ 2.94
FGFR1-205ENST00000397090 SCAPERQ9BY12 1400 aa33.43■■■□□ 2.94
FGFR1-205ENST00000397090 IQSEC2Q5JU85 1478 aa33.4■■■□□ 2.94
FGFR1-205ENST00000397090 ATP10AO60312 1499 aa33.39■■■□□ 2.94
FGFR1-205ENST00000397090 ABCC1P33527 1531 aa33.38■■■□□ 2.93
FGFR1-205ENST00000397090 PLEKHH2Q8IVE3 1493 aa33.37■■■□□ 2.93
FGFR1-205ENST00000397090 SETD1BQ9UPS6 1966 aaKnown RBP33.37■■■□□ 2.93
FGFR1-205ENST00000397090 C9orf84Q5VXU9 1444 aa33.36■■■□□ 2.93
FGFR1-205ENST00000397090 ZNF777Q9ULD5 760 aaPredicted RBP33.36■■■□□ 2.93
FGFR1-205ENST00000397090 MYOM3Q5VTT5 1437 aa33.36■■■□□ 2.93
FGFR1-205ENST00000397090 LTBP4Q8N2S1 1624 aa33.35■■■□□ 2.93
FGFR1-205ENST00000397090 SAMD9LQ8IVG5 1584 aa33.35■■■□□ 2.93
FGFR1-205ENST00000397090 KIAA1107Q9UPP5 1409 aa33.34■■■□□ 2.93
FGFR1-205ENST00000397090 MIA2Q96PC5 1412 aa33.32■■■□□ 2.92
FGFR1-205ENST00000397090 ZNF518AQ6AHZ1 1483 aa33.31■■■□□ 2.92
FGFR1-205ENST00000397090 SYCP2Q9BX26 1530 aa33.25■■■□□ 2.91
FGFR1-205ENST00000397090 ZNF644Q9H582 1327 aaPredicted RBP33.25■■■□□ 2.91
FGFR1-205ENST00000397090 CAMSAP2Q08AD1 1489 aa33.24■■■□□ 2.91
FGFR1-205ENST00000397090 TRAPPC8Q9Y2L5 1435 aa33.23■■■□□ 2.91
FGFR1-205ENST00000397090 KDM5CP41229 1560 aa33.22■■■□□ 2.91
FGFR1-205ENST00000397090 AFAP1Q8N556 730 aa33.21■■■□□ 2.91
FGFR1-205ENST00000397090 HNRNPMP52272 730 aaKnown RBP eCLIP33.2■■■□□ 2.91
FGFR1-205ENST00000397090 FGD6Q6ZV73 1430 aa33.19■■■□□ 2.9
FGFR1-205ENST00000397090 MBD5Q9P267 1494 aa33.18■■■□□ 2.9
FGFR1-205ENST00000397090 RSPH4AQ5TD94 716 aa33.16■■■□□ 2.9
FGFR1-205ENST00000397090 MLH3Q9UHC1 1453 aa33.15■■■□□ 2.9
FGFR1-205ENST00000397090 NCOA1Q15788 1441 aa33.14■■■□□ 2.9
FGFR1-205ENST00000397090 PPARGC1BQ86YN6 1023 aaKnown RBP33.13■■■□□ 2.89
FGFR1-205ENST00000397090 UBAP1LF5GYI3 381 aa33.12■■■□□ 2.89
FGFR1-205ENST00000397090 TCOF1Q13428 1488 aaKnown RBP33.11■■■□□ 2.89
FGFR1-205ENST00000397090 C3P01024 1663 aa33.1■■■□□ 2.89
FGFR1-205ENST00000397090 ARHGEF5Q12774 1597 aa33.1■■■□□ 2.89
FGFR1-205ENST00000397090 CCDC141Q6ZP82 1450 aa33.1■■■□□ 2.89
FGFR1-205ENST00000397090 PTPN23Q9H3S7 1636 aa33.1■■■□□ 2.89
FGFR1-205ENST00000397090 SPAG9O60271 1321 aaKnown RBP33.08■■■□□ 2.89
FGFR1-205ENST00000397090 ESF1Q9H501 851 aaKnown RBP33.05■■■□□ 2.88
FGFR1-205ENST00000397090 MYT1LQ9UL68 1186 aa33.05■■■□□ 2.88
FGFR1-205ENST00000397090 REREQ9P2R6 1566 aa33.02■■■□□ 2.88
FGFR1-205ENST00000397090 RTEL1-TNFRSF6BF6WH68 1400 aa33.02■■■□□ 2.88
FGFR1-205ENST00000397090 INO80Q9ULG1 1556 aaPredicted RBP33■■■□□ 2.87
FGFR1-205ENST00000397090 ATP7AQ04656 1500 aa33■■■□□ 2.87
FGFR1-205ENST00000397090 DIP2CQ9Y2E4 1556 aa33■■■□□ 2.87
FGFR1-205ENST00000397090 ZNF335Q9H4Z2 1342 aaPredicted RBP32.99■■■□□ 2.87
FGFR1-205ENST00000397090 KIDINS220Q9ULH0 1771 aa32.98■■■□□ 2.87
FGFR1-205ENST00000397090 TSPY4P0CV99 314 aa32.98■■■□□ 2.87
FGFR1-205ENST00000397090 TSPY10P0CW01 314 aa32.98■■■□□ 2.87
FGFR1-205ENST00000397090 CAMSAP1Q5T5Y3 1602 aa32.96■■■□□ 2.87
FGFR1-205ENST00000397090 ABCA6Q8N139 1617 aa32.95■■■□□ 2.86
FGFR1-205ENST00000397090 AGLP35573 1532 aa32.94■■■□□ 2.86
FGFR1-205ENST00000397090 FAM50AQ14320 339 aaKnown RBP32.93■■■□□ 2.86
FGFR1-205ENST00000397090 CNTLNQ9NXG0 1405 aa32.93■■■□□ 2.86
FGFR1-205ENST00000397090 MED1Q15648 1581 aaPredicted RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms