RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ESF1Q9H501 851 aaKnown RBP20.98■□□□□ 0.95
MCF2L-205ENST00000397017 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
MCF2L-205ENST00000397017 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
MCF2L-205ENST00000397017 KIF3BO15066 747 aa20.97■□□□□ 0.95
MCF2L-205ENST00000397017 AFAP1Q8N556 730 aa20.95■□□□□ 0.94
MCF2L-205ENST00000397017 MRS2Q9HD23 443 aa20.92■□□□□ 0.94
MCF2L-205ENST00000397017 SPAG9O60271 1321 aaKnown RBP20.91■□□□□ 0.94
MCF2L-205ENST00000397017 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-205ENST00000397017 MAGI1Q96QZ7 1491 aaPredicted RBP20.88■□□□□ 0.93
MCF2L-205ENST00000397017 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
MCF2L-205ENST00000397017 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
MCF2L-205ENST00000397017 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
MCF2L-205ENST00000397017 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
MCF2L-205ENST00000397017 IRX6P78412 446 aaPredicted RBP20.82■□□□□ 0.92
MCF2L-205ENST00000397017 TMC1Q8TDI8 760 aa20.81■□□□□ 0.92
MCF2L-205ENST00000397017 KIF15Q9NS87 1388 aa20.81■□□□□ 0.92
MCF2L-205ENST00000397017 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
MCF2L-205ENST00000397017 EHBP1L1Q8N3D4 1523 aa20.8■□□□□ 0.92
MCF2L-205ENST00000397017 ARHGEF11O15085 1522 aa20.79■□□□□ 0.92
MCF2L-205ENST00000397017 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
MCF2L-205ENST00000397017 EIF4G3O43432 1585 aaKnown RBP20.79■□□□□ 0.92
MCF2L-205ENST00000397017 FKBP8Q14318 412 aa20.78■□□□□ 0.92
MCF2L-205ENST00000397017 HECW1Q76N89 1606 aa20.78■□□□□ 0.92
MCF2L-205ENST00000397017 UACAQ9BZF9 1416 aa20.78■□□□□ 0.92
MCF2L-205ENST00000397017 NAIPQ13075 1403 aa20.77■□□□□ 0.92
MCF2L-205ENST00000397017 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.92
MCF2L-205ENST00000397017 ABCA5Q8WWZ7 1642 aa20.76■□□□□ 0.91
MCF2L-205ENST00000397017 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
MCF2L-205ENST00000397017 WDR62O43379 1518 aa20.76■□□□□ 0.91
MCF2L-205ENST00000397017 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
MCF2L-205ENST00000397017 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
MCF2L-205ENST00000397017 RSPH4AQ5TD94 716 aa20.74■□□□□ 0.91
MCF2L-205ENST00000397017 HFM1A2PYH4 1435 aa20.73■□□□□ 0.91
MCF2L-205ENST00000397017 NUP153P49790 1475 aaKnown RBP20.71■□□□□ 0.91
MCF2L-205ENST00000397017 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
MCF2L-205ENST00000397017 MYT1Q01538 1121 aa20.7■□□□□ 0.9
MCF2L-205ENST00000397017 FAM69CQ0P6D2 419 aa20.7■□□□□ 0.9
MCF2L-205ENST00000397017 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
MCF2L-205ENST00000397017 ARHGAP5Q13017 1502 aa20.7■□□□□ 0.9
MCF2L-205ENST00000397017 DAPK1P53355 1430 aa20.7■□□□□ 0.9
MCF2L-205ENST00000397017 CTTNBP2Q8WZ74 1663 aa20.68■□□□□ 0.9
MCF2L-205ENST00000397017 ST20-MTHFSA0A0A6YYL1 179 aa20.68■□□□□ 0.9
MCF2L-205ENST00000397017 MIA2Q96PC5 1412 aa20.68■□□□□ 0.9
MCF2L-205ENST00000397017 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
MCF2L-205ENST00000397017 KANK1Q14678 1352 aa20.67■□□□□ 0.9
MCF2L-205ENST00000397017 RAPGEF3O95398 923 aa20.67■□□□□ 0.9
MCF2L-205ENST00000397017 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
MCF2L-205ENST00000397017 WASHC2CQ9Y4E1 1318 aa20.66■□□□□ 0.9
MCF2L-205ENST00000397017 ABCC5O15440 1437 aa20.66■□□□□ 0.9
MCF2L-205ENST00000397017 STK26Q9P289 416 aa20.65■□□□□ 0.9
MCF2L-205ENST00000397017 DISP1Q96F81 1524 aa20.65■□□□□ 0.9
MCF2L-205ENST00000397017 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
MCF2L-205ENST00000397017 TNNT2P45379 298 aaPredicted RBP20.65■□□□□ 0.9
MCF2L-205ENST00000397017 PLEKHG5O94827 1062 aa20.64■□□□□ 0.9
MCF2L-205ENST00000397017 C9orf84Q5VXU9 1444 aa20.64■□□□□ 0.89
MCF2L-205ENST00000397017 ATP10BO94823 1461 aa20.64■□□□□ 0.89
MCF2L-205ENST00000397017 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
MCF2L-205ENST00000397017 PBRM1Q86U86 1689 aa20.62■□□□□ 0.89
MCF2L-205ENST00000397017 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
MCF2L-205ENST00000397017 SCAPERQ9BY12 1400 aa20.59■□□□□ 0.89
MCF2L-205ENST00000397017 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.88
MCF2L-205ENST00000397017 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
MCF2L-205ENST00000397017 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
MCF2L-205ENST00000397017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.57■□□□□ 0.881e-7■■□□□ 13.6
MCF2L-205ENST00000397017 KIAA0556O60303 1618 aa20.57■□□□□ 0.88
MCF2L-205ENST00000397017 GPATCH8Q9UKJ3 1502 aaKnown RBP20.56■□□□□ 0.88
MCF2L-205ENST00000397017 MAGI3Q5TCQ9 1506 aa20.54■□□□□ 0.88
MCF2L-205ENST00000397017 NBPF1Q3BBV0 1214 aa20.54■□□□□ 0.88
MCF2L-205ENST00000397017 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
MCF2L-205ENST00000397017 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
MCF2L-205ENST00000397017 NUP160Q12769 1436 aa20.53■□□□□ 0.88
MCF2L-205ENST00000397017 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
MCF2L-205ENST00000397017 RAPGEF6Q8TEU7 1601 aa20.53■□□□□ 0.88
MCF2L-205ENST00000397017 NCOA1Q15788 1441 aa20.51■□□□□ 0.87
MCF2L-205ENST00000397017 TMF1P82094 1093 aa20.51■□□□□ 0.87
MCF2L-205ENST00000397017 TRAK1Q9UPV9 953 aa20.51■□□□□ 0.87
MCF2L-205ENST00000397017 WASHC2AQ641Q2 1341 aa20.51■□□□□ 0.87
MCF2L-205ENST00000397017 USP47Q96K76 1375 aa20.5■□□□□ 0.87
MCF2L-205ENST00000397017 POGKQ9P215 609 aa20.49■□□□□ 0.87
MCF2L-205ENST00000397017 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
MCF2L-205ENST00000397017 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
MCF2L-205ENST00000397017 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
MCF2L-205ENST00000397017 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
MCF2L-205ENST00000397017 MAPKBP1O60336 1514 aa20.45■□□□□ 0.86
MCF2L-205ENST00000397017 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
MCF2L-205ENST00000397017 C11orf95C9JLR9 678 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-205ENST00000397017 KIF7Q2M1P5 1343 aa20.44■□□□□ 0.86
MCF2L-205ENST00000397017 AKNAQ7Z591 1439 aa20.43■□□□□ 0.86
MCF2L-205ENST00000397017 SLC24A1O60721 1099 aa20.42■□□□□ 0.86
MCF2L-205ENST00000397017 KIAA1107Q9UPP5 1409 aa20.42■□□□□ 0.86
MCF2L-205ENST00000397017 TMEM132EQ6IEE7 984 aa20.41■□□□□ 0.86
MCF2L-205ENST00000397017 CFAP43Q8NDM7 1665 aa20.41■□□□□ 0.86
MCF2L-205ENST00000397017 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
MCF2L-205ENST00000397017 SRPK2P78362 688 aaKnown RBP20.41■□□□□ 0.86
MCF2L-205ENST00000397017 ROCK1Q13464 1354 aa20.4■□□□□ 0.86
MCF2L-205ENST00000397017 ERICH6Q7L0X2 663 aa20.4■□□□□ 0.86
MCF2L-205ENST00000397017 CCER2I3L3R5 266 aa20.4■□□□□ 0.86
MCF2L-205ENST00000397017 KIF14Q15058 1648 aa20.39■□□□□ 0.85
MCF2L-205ENST00000397017 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-205ENST00000397017 CFAP70Q5T0N1 1121 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms