RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
NUP98-204ENST00000397004 NCOA1Q15788 1441 aa19.36■□□□□ 0.69
NUP98-204ENST00000397004 BCL11AQ9H165 835 aa19.35■□□□□ 0.69
NUP98-204ENST00000397004 PRKRIP1Q9H875 184 aaPredicted RBP19.35■□□□□ 0.69
NUP98-204ENST00000397004 EPRSP07814 1512 aaKnown RBP19.35■□□□□ 0.69
NUP98-204ENST00000397004 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
NUP98-204ENST00000397004 CCDC7Q96M83 1385 aa19.34■□□□□ 0.69
NUP98-204ENST00000397004 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
NUP98-204ENST00000397004 SPATA31E1Q6ZUB1 1445 aa19.32■□□□□ 0.68
NUP98-204ENST00000397004 AKNAQ7Z591 1439 aa19.32■□□□□ 0.68
NUP98-204ENST00000397004 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
NUP98-204ENST00000397004 ANKRD30BQ9BXX2 1392 aa19.31■□□□□ 0.68
NUP98-204ENST00000397004 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
NUP98-204ENST00000397004 ZNF644Q9H582 1327 aaPredicted RBP19.31■□□□□ 0.68
NUP98-204ENST00000397004 FAM9BQ8IZU0 186 aa19.3■□□□□ 0.68
NUP98-204ENST00000397004 FANCIQ9NVI1 1328 aa19.29■□□□□ 0.68
NUP98-204ENST00000397004 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
NUP98-204ENST00000397004 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
NUP98-204ENST00000397004 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.68
NUP98-204ENST00000397004 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
NUP98-204ENST00000397004 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
NUP98-204ENST00000397004 ABCC5O15440 1437 aa19.24■□□□□ 0.67
NUP98-204ENST00000397004 SYNJ2O15056 1496 aa19.23■□□□□ 0.67
NUP98-204ENST00000397004 CEP170Q5SW79 1584 aa19.23■□□□□ 0.67
NUP98-204ENST00000397004 MRS2Q9HD23 443 aa19.23■□□□□ 0.67
NUP98-204ENST00000397004 DAPK1P53355 1430 aa19.23■□□□□ 0.67
NUP98-204ENST00000397004 CDK11AQ9UQ88 783 aaPredicted RBP19.22■□□□□ 0.67
NUP98-204ENST00000397004 PPP4R2Q9NY27 417 aa19.22■□□□□ 0.67
NUP98-204ENST00000397004 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
NUP98-204ENST00000397004 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
NUP98-204ENST00000397004 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
NUP98-204ENST00000397004 DHX29Q7Z478 1369 aaKnown RBP19.18■□□□□ 0.66
NUP98-204ENST00000397004 BCORL1Q5H9F3 1711 aa19.18■□□□□ 0.66
NUP98-204ENST00000397004 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
NUP98-204ENST00000397004 KIAA0556O60303 1618 aa19.17■□□□□ 0.66
NUP98-204ENST00000397004 DNMT1P26358 1616 aaKnown RBP19.17■□□□□ 0.66
NUP98-204ENST00000397004 POLR1AO95602 1720 aaPredicted RBP19.16■□□□□ 0.66
NUP98-204ENST00000397004 PZPP20742 1482 aa19.16■□□□□ 0.66
NUP98-204ENST00000397004 ROCK1Q13464 1354 aa19.16■□□□□ 0.66
NUP98-204ENST00000397004 NUP160Q12769 1436 aa19.16■□□□□ 0.66
NUP98-204ENST00000397004 ERICH6BQ5W0A0 696 aa19.15■□□□□ 0.66
NUP98-204ENST00000397004 CNGB1Q14028 1251 aaPredicted RBP19.14■□□□□ 0.65
NUP98-204ENST00000397004 NUP153P49790 1475 aaKnown RBP19.14■□□□□ 0.65
NUP98-204ENST00000397004 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
NUP98-204ENST00000397004 MBD5Q9P267 1494 aa19.12■□□□□ 0.65
NUP98-204ENST00000397004 CHD1O14646 1710 aa19.07■□□□□ 0.64
NUP98-204ENST00000397004 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
NUP98-204ENST00000397004 RNF123Q5XPI4 1314 aa19.05■□□□□ 0.64
NUP98-204ENST00000397004 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
NUP98-204ENST00000397004 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
NUP98-204ENST00000397004 USP47Q96K76 1375 aa19.03■□□□□ 0.64
NUP98-204ENST00000397004 KDM5CP41229 1560 aa19.02■□□□□ 0.64
NUP98-204ENST00000397004 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
NUP98-204ENST00000397004 CAMSAP2Q08AD1 1489 aa19.01■□□□□ 0.63
NUP98-204ENST00000397004 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
NUP98-204ENST00000397004 KIF14Q15058 1648 aa19■□□□□ 0.63
NUP98-204ENST00000397004 RAPGEF6Q8TEU7 1601 aa19■□□□□ 0.63
NUP98-204ENST00000397004 PNISRQ8TF01 805 aaKnown RBP18.99■□□□□ 0.63
NUP98-204ENST00000397004 GPATCH8Q9UKJ3 1502 aaKnown RBP18.98■□□□□ 0.63
NUP98-204ENST00000397004 POLR3GLQ9BT43 218 aa18.98■□□□□ 0.63
NUP98-204ENST00000397004 PKD2Q13563 968 aa18.98■□□□□ 0.63
NUP98-204ENST00000397004 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
NUP98-204ENST00000397004 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
NUP98-204ENST00000397004 PLB1Q6P1J6 1458 aa18.96■□□□□ 0.63
NUP98-204ENST00000397004 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
NUP98-204ENST00000397004 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
NUP98-204ENST00000397004 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
NUP98-204ENST00000397004 TROQ12816 1431 aaPredicted RBP18.92■□□□□ 0.62
NUP98-204ENST00000397004 CROCC2H7BZ55 1655 aa18.92■□□□□ 0.62
NUP98-204ENST00000397004 ADGRL2O95490 1459 aa18.92■□□□□ 0.62
NUP98-204ENST00000397004 ADGBQ8N7X0 1667 aa18.92■□□□□ 0.62
NUP98-204ENST00000397004 ERICH6Q7L0X2 663 aa18.91■□□□□ 0.62
NUP98-204ENST00000397004 FBLN2P98095 1184 aa18.9■□□□□ 0.62
NUP98-204ENST00000397004 UHRF1BP1Q6BDS2 1440 aa18.9■□□□□ 0.62
NUP98-204ENST00000397004 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
NUP98-204ENST00000397004 ABCA8O94911 1581 aa18.89■□□□□ 0.61
NUP98-204ENST00000397004 LRPPRCP42704 1394 aaKnown RBP18.89■□□□□ 0.61
NUP98-204ENST00000397004 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
NUP98-204ENST00000397004 RALGAPBQ86X10 1494 aa18.87■□□□□ 0.61
NUP98-204ENST00000397004 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
NUP98-204ENST00000397004 ANKRD50Q9ULJ7 1429 aa18.86■□□□□ 0.61
NUP98-204ENST00000397004 DEKP35659 375 aaKnown RBP18.86■□□□□ 0.61
NUP98-204ENST00000397004 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
NUP98-204ENST00000397004 CCDC136Q96JN2 1154 aa18.86■□□□□ 0.61
NUP98-204ENST00000397004 NBR1Q14596 966 aa18.85■□□□□ 0.61
NUP98-204ENST00000397004 ADCY10Q96PN6 1610 aa18.85■□□□□ 0.61
NUP98-204ENST00000397004 CDC42BPAQ5VT25 1732 aa18.84■□□□□ 0.61
NUP98-204ENST00000397004 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
NUP98-204ENST00000397004 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.61
NUP98-204ENST00000397004 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.61
NUP98-204ENST00000397004 ITSN2Q9NZM3 1697 aa18.83■□□□□ 0.6
NUP98-204ENST00000397004 E9PCH4 1651 aa18.82■□□□□ 0.6
NUP98-204ENST00000397004 TMC1Q8TDI8 760 aa18.82■□□□□ 0.6
NUP98-204ENST00000397004 NUP155O75694 1391 aa18.82■□□□□ 0.6
NUP98-204ENST00000397004 ARID4BQ4LE39 1312 aaPredicted RBP18.81■□□□□ 0.6
NUP98-204ENST00000397004 ANKRD30AQ9BXX3 1397 aa18.8■□□□□ 0.6
NUP98-204ENST00000397004 EXOC6Q8TAG9 804 aa18.79■□□□□ 0.6
NUP98-204ENST00000397004 ABCC10Q5T3U5 1492 aa18.79■□□□□ 0.6
NUP98-204ENST00000397004 SALL2Q9Y467 1007 aaPredicted RBP18.78■□□□□ 0.6
NUP98-204ENST00000397004 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms