RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NBPF8Q3BBV2 869 aa32.79■■■□□ 2.84
CSNK1E-203ENST00000396832 CDK13Q14004 1512 aaKnown RBP32.79■■■□□ 2.84
CSNK1E-203ENST00000396832 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
CSNK1E-203ENST00000396832 NBR1Q14596 966 aa32.77■■■□□ 2.84
CSNK1E-203ENST00000396832 CCDC7Q96M83 1385 aa32.74■■■□□ 2.83
CSNK1E-203ENST00000396832 ZNF326Q5BKZ1 582 aaKnown RBP32.72■■■□□ 2.83
CSNK1E-203ENST00000396832 ABCA5Q8WWZ7 1642 aa32.72■■■□□ 2.83
CSNK1E-203ENST00000396832 HECW1Q76N89 1606 aa32.72■■■□□ 2.83
CSNK1E-203ENST00000396832 PAK3O75914 559 aaPredicted RBP32.71■■■□□ 2.83
CSNK1E-203ENST00000396832 ZNF644Q9H582 1327 aaPredicted RBP32.7■■■□□ 2.83
CSNK1E-203ENST00000396832 GCC2Q8IWJ2 1684 aa32.7■■■□□ 2.82
CSNK1E-203ENST00000396832 PRKCSHP14314 528 aaPredicted RBP32.67■■■□□ 2.82
CSNK1E-203ENST00000396832 ARHGEF11O15085 1522 aa32.66■■■□□ 2.82
CSNK1E-203ENST00000396832 KIF7Q2M1P5 1343 aa32.65■■■□□ 2.82
CSNK1E-203ENST00000396832 ZBED9Q6R2W3 1325 aa32.65■■■□□ 2.82
CSNK1E-203ENST00000396832 THOC2Q8NI27 1593 aaKnown RBP32.65■■■□□ 2.82
CSNK1E-203ENST00000396832 NCOA1Q15788 1441 aa32.65■■■□□ 2.82
CSNK1E-203ENST00000396832 SLC4A1APQ9BWU0 796 aaKnown RBP32.64■■■□□ 2.82
CSNK1E-203ENST00000396832 EPRSP07814 1512 aaKnown RBP32.63■■■□□ 2.81
CSNK1E-203ENST00000396832 TCOF1Q13428 1488 aaKnown RBP32.61■■■□□ 2.81
CSNK1E-203ENST00000396832 AKNAQ7Z591 1439 aa32.54■■■□□ 2.8
CSNK1E-203ENST00000396832 ANKRD30BQ9BXX2 1392 aa32.53■■■□□ 2.8
CSNK1E-203ENST00000396832 RPRD2Q5VT52 1461 aaKnown RBP32.48■■■□□ 2.79
CSNK1E-203ENST00000396832 TEX14Q8IWB6 1497 aa32.48■■■□□ 2.79
CSNK1E-203ENST00000396832 IPO9Q96P70 1041 aaKnown RBP32.48■■■□□ 2.79
CSNK1E-203ENST00000396832 DAPK1P53355 1430 aa32.48■■■□□ 2.79
CSNK1E-203ENST00000396832 ANP32AP39687 249 aaKnown RBP32.47■■■□□ 2.79
CSNK1E-203ENST00000396832 ZNF777Q9ULD5 760 aaPredicted RBP32.47■■■□□ 2.79
CSNK1E-203ENST00000396832 IQGAP2Q13576 1575 aa32.45■■■□□ 2.79
CSNK1E-203ENST00000396832 RTL5Q5HYW3 569 aaPredicted RBP32.43■■■□□ 2.78
CSNK1E-203ENST00000396832 MIA2Q96PC5 1412 aa32.43■■■□□ 2.78
CSNK1E-203ENST00000396832 ERCC6Q03468 1493 aa32.42■■■□□ 2.78
CSNK1E-203ENST00000396832 ABCC5O15440 1437 aa32.41■■■□□ 2.78
CSNK1E-203ENST00000396832 ZBTB47Q9UFB7 747 aaPredicted RBP32.41■■■□□ 2.78
CSNK1E-203ENST00000396832 ANO8Q9HCE9 1232 aaPredicted RBP32.4■■■□□ 2.78
CSNK1E-203ENST00000396832 WDR62O43379 1518 aa32.4■■■□□ 2.78
CSNK1E-203ENST00000396832 CCDC136Q96JN2 1154 aa32.4■■■□□ 2.78
CSNK1E-203ENST00000396832 SPATA31E1Q6ZUB1 1445 aa32.38■■■□□ 2.77
CSNK1E-203ENST00000396832 MRC2Q9UBG0 1479 aa32.38■■■□□ 2.77
CSNK1E-203ENST00000396832 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
CSNK1E-203ENST00000396832 TARBP1Q13395 1621 aaKnown RBP32.35■■■□□ 2.77
CSNK1E-203ENST00000396832 SMG6Q86US8 1419 aaKnown RBP32.34■■■□□ 2.77
CSNK1E-203ENST00000396832 PBRM1Q86U86 1689 aa32.34■■■□□ 2.77
CSNK1E-203ENST00000396832 USP47Q96K76 1375 aa32.32■■■□□ 2.76
CSNK1E-203ENST00000396832 SALL2Q9Y467 1007 aaPredicted RBP32.3■■■□□ 2.76
CSNK1E-203ENST00000396832 NUDCQ9Y266 331 aa32.29■■■□□ 2.76
CSNK1E-203ENST00000396832 DHX29Q7Z478 1369 aaKnown RBP32.29■■■□□ 2.76
CSNK1E-203ENST00000396832 FBLN2P98095 1184 aa32.27■■■□□ 2.76
CSNK1E-203ENST00000396832 PKD2Q13563 968 aa32.27■■■□□ 2.76
CSNK1E-203ENST00000396832 RNF123Q5XPI4 1314 aa32.27■■■□□ 2.76
CSNK1E-203ENST00000396832 DNMT1P26358 1616 aaKnown RBP32.27■■■□□ 2.76
CSNK1E-203ENST00000396832 BCORL1Q5H9F3 1711 aa32.26■■■□□ 2.75
CSNK1E-203ENST00000396832 CFDP1Q9UEE9 299 aaPredicted RBP32.25■■■□□ 2.75
CSNK1E-203ENST00000396832 KDM2AQ9Y2K7 1162 aa32.25■■■□□ 2.75
CSNK1E-203ENST00000396832 ROCK1Q13464 1354 aa32.25■■■□□ 2.75
CSNK1E-203ENST00000396832 PRG4Q92954 1404 aaPredicted RBP32.23■■■□□ 2.75
CSNK1E-203ENST00000396832 PZPP20742 1482 aa32.23■■■□□ 2.75
CSNK1E-203ENST00000396832 ADAMTS12P58397 1594 aa32.23■■■□□ 2.75
CSNK1E-203ENST00000396832 TMC1Q8TDI8 760 aa32.22■■■□□ 2.75
CSNK1E-203ENST00000396832 NUP153P49790 1475 aaKnown RBP32.21■■■□□ 2.75
CSNK1E-203ENST00000396832 IL27Q8NEV9 243 aa32.19■■■□□ 2.74
CSNK1E-203ENST00000396832 POLR1AO95602 1720 aaPredicted RBP32.19■■■□□ 2.74
CSNK1E-203ENST00000396832 CARD11Q9BXL7 1154 aa32.14■■■□□ 2.74
CSNK1E-203ENST00000396832 CAMSAP2Q08AD1 1489 aa32.14■■■□□ 2.74
CSNK1E-203ENST00000396832 PNISRQ8TF01 805 aaKnown RBP32.11■■■□□ 2.73
CSNK1E-203ENST00000396832 DISP1Q96F81 1524 aa32.11■■■□□ 2.73
CSNK1E-203ENST00000396832 NPM2Q86SE8 214 aaKnown RBP32.09■■■□□ 2.73
CSNK1E-203ENST00000396832 KIAA1107Q9UPP5 1409 aa32.09■■■□□ 2.73
CSNK1E-203ENST00000396832 KIAA0556O60303 1618 aa32.08■■■□□ 2.73
CSNK1E-203ENST00000396832 RTN4Q9NQC3 1192 aaKnown RBP32.08■■■□□ 2.73
CSNK1E-203ENST00000396832 ST20-MTHFSA0A0A6YYL1 179 aa32.07■■■□□ 2.73
CSNK1E-203ENST00000396832 MBD5Q9P267 1494 aa32.05■■■□□ 2.72
CSNK1E-203ENST00000396832 RAPGEF6Q8TEU7 1601 aa32.05■■■□□ 2.72
CSNK1E-203ENST00000396832 PLB1Q6P1J6 1458 aa32.04■■■□□ 2.72
CSNK1E-203ENST00000396832 KDM5CP41229 1560 aa32.02■■■□□ 2.72
CSNK1E-203ENST00000396832 KIF14Q15058 1648 aa32.02■■■□□ 2.72
CSNK1E-203ENST00000396832 IFT140Q96RY7 1462 aa32.02■■■□□ 2.72
CSNK1E-203ENST00000396832 NEFMP07197 916 aa32.02■■■□□ 2.72
CSNK1E-203ENST00000396832 NUP155O75694 1391 aa32.01■■■□□ 2.72
CSNK1E-203ENST00000396832 DCAF11Q8TEB1 546 aa32.01■■■□□ 2.71
CSNK1E-203ENST00000396832 LAS1LQ9Y4W2 734 aaKnown RBP32.01■■■□□ 2.71
CSNK1E-203ENST00000396832 EXOC6Q8TAG9 804 aa31.98■■■□□ 2.71
CSNK1E-203ENST00000396832 CHMP7Q8WUX9 453 aaPredicted RBP31.98■■■□□ 2.71
CSNK1E-203ENST00000396832 GPATCH8Q9UKJ3 1502 aaKnown RBP31.97■■■□□ 2.71
CSNK1E-203ENST00000396832 TROQ12816 1431 aaPredicted RBP31.97■■■□□ 2.71
CSNK1E-203ENST00000396832 ANKRD50Q9ULJ7 1429 aa31.97■■■□□ 2.71
CSNK1E-203ENST00000396832 USP35Q9P2H5 1018 aa31.96■■■□□ 2.71
CSNK1E-203ENST00000396832 TCERG1O14776 1098 aaKnown RBP31.95■■■□□ 2.7
CSNK1E-203ENST00000396832 KIAA0586Q9BVV6 1533 aa31.94■■■□□ 2.7
CSNK1E-203ENST00000396832 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
CSNK1E-203ENST00000396832 PDE4AP27815 886 aa31.93■■■□□ 2.7
CSNK1E-203ENST00000396832 KIF15Q9NS87 1388 aa31.91■■■□□ 2.7
CSNK1E-203ENST00000396832 ADGBQ8N7X0 1667 aa31.9■■■□□ 2.7
CSNK1E-203ENST00000396832 SKAP1Q86WV1 359 aa31.9■■■□□ 2.7
CSNK1E-203ENST00000396832 RGL3Q3MIN7 710 aa31.89■■■□□ 2.7
CSNK1E-203ENST00000396832 RRP1P56182 461 aaKnown RBP31.88■■■□□ 2.69
CSNK1E-203ENST00000396832 EIF4G3O43432 1585 aaKnown RBP31.88■■■□□ 2.69
CSNK1E-203ENST00000396832 MYBBP1AQ9BQG0 1328 aaKnown RBP31.87■■■□□ 2.69
CSNK1E-203ENST00000396832 CDCA7LQ96GN5 454 aa31.86■■■□□ 2.69
CSNK1E-203ENST00000396832 BACH2Q9BYV9 841 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms