RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 MYO5CQ9NQX4 1742 aa26.79■■□□□ 1.88
CLTA-203ENST00000396603 CLIP1P30622 1438 aa26.79■■□□□ 1.88
CLTA-203ENST00000396603 YEATS2Q9ULM3 1422 aa26.77■■□□□ 1.88
CLTA-203ENST00000396603 ATP1B4Q9UN42 357 aaPredicted RBP26.77■■□□□ 1.88
CLTA-203ENST00000396603 PCF11O94913 1555 aaKnown RBP26.75■■□□□ 1.87
CLTA-203ENST00000396603 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
CLTA-203ENST00000396603 ZNF518AQ6AHZ1 1483 aa26.73■■□□□ 1.87
CLTA-203ENST00000396603 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
CLTA-203ENST00000396603 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
CLTA-203ENST00000396603 RIMS1Q86UR5 1692 aaKnown RBP26.71■■□□□ 1.87
CLTA-203ENST00000396603 LMTK3Q96Q04 1460 aa26.71■■□□□ 1.87
CLTA-203ENST00000396603 ATP10AO60312 1499 aa26.7■■□□□ 1.87
CLTA-203ENST00000396603 C9orf84Q5VXU9 1444 aa26.69■■□□□ 1.86
CLTA-203ENST00000396603 KDM5CP41229 1560 aa26.67■■□□□ 1.86
CLTA-203ENST00000396603 ARHGAP5Q13017 1502 aa26.67■■□□□ 1.86
CLTA-203ENST00000396603 SIGLEC1Q9BZZ2 1709 aa26.66■■□□□ 1.86
CLTA-203ENST00000396603 LRRIQ1Q96JM4 1722 aa26.65■■□□□ 1.86
CLTA-203ENST00000396603 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.85
CLTA-203ENST00000396603 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
CLTA-203ENST00000396603 REREQ9P2R6 1566 aa26.61■■□□□ 1.85
CLTA-203ENST00000396603 FER1L4A9Z1Z3 1794 aa26.59■■□□□ 1.85
CLTA-203ENST00000396603 PREX2Q70Z35 1606 aa26.59■■□□□ 1.85
CLTA-203ENST00000396603 MLH3Q9UHC1 1453 aa26.58■■□□□ 1.85
CLTA-203ENST00000396603 CDC42BPBQ9Y5S2 1711 aa26.57■■□□□ 1.84
CLTA-203ENST00000396603 ABCC1P33527 1531 aa26.55■■□□□ 1.84
CLTA-203ENST00000396603 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
CLTA-203ENST00000396603 FBXO41Q8TF61 875 aa26.53■■□□□ 1.84
CLTA-203ENST00000396603 DIP2CQ9Y2E4 1556 aa26.53■■□□□ 1.84
CLTA-203ENST00000396603 MLECQ14165 292 aa26.52■■□□□ 1.84
CLTA-203ENST00000396603 AGLP35573 1532 aa26.49■■□□□ 1.83
CLTA-203ENST00000396603 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
CLTA-203ENST00000396603 TRAPPC8Q9Y2L5 1435 aa26.46■■□□□ 1.83
CLTA-203ENST00000396603 ABCA6Q8N139 1617 aa26.46■■□□□ 1.83
CLTA-203ENST00000396603 CDC42BPAQ5VT25 1732 aa26.45■■□□□ 1.83
CLTA-203ENST00000396603 PREX1Q8TCU6 1659 aa26.44■■□□□ 1.82
CLTA-203ENST00000396603 MYT1LQ9UL68 1186 aa26.43■■□□□ 1.82
CLTA-203ENST00000396603 HSPA2P54652 639 aa26.42■■□□□ 1.82
CLTA-203ENST00000396603 GPATCH8Q9UKJ3 1502 aaKnown RBP26.4■■□□□ 1.82
CLTA-203ENST00000396603 PLPPR3Q6T4P5 718 aa26.39■■□□□ 1.82
CLTA-203ENST00000396603 PLEKHH2Q8IVE3 1493 aa26.38■■□□□ 1.81
CLTA-203ENST00000396603 KIAA1107Q9UPP5 1409 aa26.38■■□□□ 1.81
CLTA-203ENST00000396603 KIDINS220Q9ULH0 1771 aa26.38■■□□□ 1.81
CLTA-203ENST00000396603 CNTLNQ9NXG0 1405 aa26.36■■□□□ 1.81
CLTA-203ENST00000396603 SAMD9LQ8IVG5 1584 aa26.36■■□□□ 1.81
CLTA-203ENST00000396603 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
CLTA-203ENST00000396603 CEBPAP49715 358 aaPredicted RBP26.32■■□□□ 1.8
CLTA-203ENST00000396603 ESF1Q9H501 851 aaKnown RBP26.32■■□□□ 1.8
CLTA-203ENST00000396603 SETD1BQ9UPS6 1966 aaKnown RBP26.32■■□□□ 1.8
CLTA-203ENST00000396603 SYCP2Q9BX26 1530 aa26.32■■□□□ 1.8
CLTA-203ENST00000396603 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
CLTA-203ENST00000396603 MTUS2Q5JR59 1369 aa26.3■■□□□ 1.8
CLTA-203ENST00000396603 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
CLTA-203ENST00000396603 SPAG9O60271 1321 aaKnown RBP26.29■■□□□ 1.8
CLTA-203ENST00000396603 C3P01024 1663 aa26.28■■□□□ 1.8
CLTA-203ENST00000396603 CFDP1Q9UEE9 299 aaPredicted RBP26.28■■□□□ 1.8
CLTA-203ENST00000396603 ZNF777Q9ULD5 760 aaPredicted RBP26.27■■□□□ 1.8
CLTA-203ENST00000396603 ATP7AQ04656 1500 aa26.26■■□□□ 1.79
CLTA-203ENST00000396603 EHBP1L1Q8N3D4 1523 aa26.26■■□□□ 1.79
CLTA-203ENST00000396603 INO80Q9ULG1 1556 aaPredicted RBP26.25■■□□□ 1.79
CLTA-203ENST00000396603 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
CLTA-203ENST00000396603 PLXNC1O60486 1568 aa26.23■■□□□ 1.79
CLTA-203ENST00000396603 NPATQ14207 1427 aa26.22■■□□□ 1.79
CLTA-203ENST00000396603 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.79
CLTA-203ENST00000396603 CERKQ8TCT0 537 aa26.22■■□□□ 1.79
CLTA-203ENST00000396603 CEP162Q5TB80 1403 aa26.22■■□□□ 1.79
CLTA-203ENST00000396603 A2MP01023 1474 aa26.19■■□□□ 1.78
CLTA-203ENST00000396603 STRCQ7RTU9 1775 aa26.19■■□□□ 1.78
CLTA-203ENST00000396603 TIAM1Q13009 1591 aa26.19■■□□□ 1.78
CLTA-203ENST00000396603 PTPRTO14522 1441 aa26.18■■□□□ 1.78
CLTA-203ENST00000396603 PPP6R1Q9UPN7 881 aa26.17■■□□□ 1.78
CLTA-203ENST00000396603 RTEL1-TNFRSF6BF6WH68 1400 aa26.15■■□□□ 1.78
CLTA-203ENST00000396603 ZMYM3Q14202 1370 aa26.14■■□□□ 1.78
CLTA-203ENST00000396603 MBD5Q9P267 1494 aa26.14■■□□□ 1.78
CLTA-203ENST00000396603 ADGBQ8N7X0 1667 aa26.13■■□□□ 1.77
CLTA-203ENST00000396603 SUPT6HQ7KZ85 1726 aaKnown RBP26.11■■□□□ 1.77
CLTA-203ENST00000396603 NCOA1Q15788 1441 aa26.1■■□□□ 1.77
CLTA-203ENST00000396603 RSPH4AQ5TD94 716 aa26.08■■□□□ 1.77
CLTA-203ENST00000396603 ZNF644Q9H582 1327 aaPredicted RBP26.05■■□□□ 1.76
CLTA-203ENST00000396603 NCOA2Q15596 1464 aa26.04■■□□□ 1.76
CLTA-203ENST00000396603 FAM135AQ9P2D6 1515 aa26.04■■□□□ 1.76
CLTA-203ENST00000396603 CLTCQ00610 1675 aaKnown RBP26.04■■□□□ 1.76
CLTA-203ENST00000396603 CCDC141Q6ZP82 1450 aa26.04■■□□□ 1.76
CLTA-203ENST00000396603 DHX29Q7Z478 1369 aaKnown RBP26.03■■□□□ 1.76
CLTA-203ENST00000396603 PTPRKQ15262 1439 aa26.03■■□□□ 1.76
CLTA-203ENST00000396603 ZNF142P52746 1687 aaPredicted RBP26.02■■□□□ 1.76
CLTA-203ENST00000396603 PLA2R1Q13018 1463 aa26.01■■□□□ 1.75
CLTA-203ENST00000396603 IQSEC2Q5JU85 1478 aa26.01■■□□□ 1.75
CLTA-203ENST00000396603 CAMSAP1Q5T5Y3 1602 aa26■■□□□ 1.75
CLTA-203ENST00000396603 GGT6Q6P531 493 aa26■■□□□ 1.75
CLTA-203ENST00000396603 CAMSAP2Q08AD1 1489 aa25.99■■□□□ 1.75
CLTA-203ENST00000396603 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
CLTA-203ENST00000396603 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
CLTA-203ENST00000396603 ARHGEF5Q12774 1597 aa25.97■■□□□ 1.75
CLTA-203ENST00000396603 LTBP4Q8N2S1 1624 aa25.96■■□□□ 1.75
CLTA-203ENST00000396603 CEP170BQ9Y4F5 1589 aaPredicted RBP25.96■■□□□ 1.75
CLTA-203ENST00000396603 PKD2Q13563 968 aa25.95■■□□□ 1.74
CLTA-203ENST00000396603 MAP3K1Q13233 1512 aa25.94■■□□□ 1.74
CLTA-203ENST00000396603 LRRC9Q6ZRR7 1453 aa25.93■■□□□ 1.74
CLTA-203ENST00000396603 TCOF1Q13428 1488 aaKnown RBP25.92■■□□□ 1.74
CLTA-203ENST00000396603 KDM5DQ9BY66 1539 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms