RNA–Protein interactions for RNA: ENST00000396444.7

USP8-202, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 19,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-202ENST00000396444 HSP90AA1P07900 732 aaKnown RBP6.32□□□□□ -1.4
USP8-202ENST00000396444 ATP6V1DQ9Y5K8 247 aa6.32□□□□□ -1.4
USP8-202ENST00000396444 CUL7Q14999 1698 aa6.32□□□□□ -1.4
USP8-202ENST00000396444 TUBB4BP68371 445 aa6.32□□□□□ -1.4
USP8-202ENST00000396444 PDS5BQ9NTI5 1447 aa6.31□□□□□ -1.4
USP8-202ENST00000396444 KIF21AQ7Z4S6 1674 aa6.3□□□□□ -1.4
USP8-202ENST00000396444 CECR2Q9BXF3 1484 aa6.3□□□□□ -1.4
USP8-202ENST00000396444 ESF1Q9H501 851 aaKnown RBP6.3□□□□□ -1.4
USP8-202ENST00000396444 HOXA7P31268 230 aaPredicted RBP6.3□□□□□ -1.4
USP8-202ENST00000396444 CCDC7Q96M83 1385 aa6.29□□□□□ -1.4
USP8-202ENST00000396444 ERICH3Q5RHP9 1530 aa6.29□□□□□ -1.4
USP8-202ENST00000396444 HMGXB3Q12766 1538 aa6.29□□□□□ -1.4
USP8-202ENST00000396444 CNTLNQ9NXG0 1405 aa6.28□□□□□ -1.4
USP8-202ENST00000396444 NAP1L2Q9ULW6 460 aaPredicted RBP6.28□□□□□ -1.4
USP8-202ENST00000396444 LOC105371045A0A1W2PR82 267 aa6.28□□□□□ -1.4
USP8-202ENST00000396444 CALRP27797 417 aaKnown RBP6.28□□□□□ -1.4
USP8-202ENST00000396444 KNSTRNQ9Y448 316 aa6.28□□□□□ -1.4
USP8-202ENST00000396444 CAVIN2O95810 425 aa6.28□□□□□ -1.4
USP8-202ENST00000396444 KAT6BQ8WYB5 2073 aa6.28□□□□□ -1.4
USP8-202ENST00000396444 NLRP13Q86W25 1043 aa6.28□□□□□ -1.4
USP8-202ENST00000396444 ZBED9Q6R2W3 1325 aa6.27□□□□□ -1.41
USP8-202ENST00000396444 CCDC88BA6NC98 1476 aa6.27□□□□□ -1.41
USP8-202ENST00000396444 GBP4Q96PP9 640 aa6.27□□□□□ -1.41
USP8-202ENST00000396444 HMGN5P82970 282 aaKnown RBP6.27□□□□□ -1.41
USP8-202ENST00000396444 DDX11L8A8MPP1 907 aa6.26□□□□□ -1.41
USP8-202ENST00000396444 TPM3P06753 285 aa6.26□□□□□ -1.41
USP8-202ENST00000396444 PBRM1Q86U86 1689 aa6.26□□□□□ -1.41
USP8-202ENST00000396444 CCDC144AA2RUR9 1427 aa6.26□□□□□ -1.41
USP8-202ENST00000396444 DHX29Q7Z478 1369 aaKnown RBP6.26□□□□□ -1.41
USP8-202ENST00000396444 HMGB3O15347 200 aaKnown RBP6.26□□□□□ -1.41
USP8-202ENST00000396444 TUBB4AP04350 444 aa6.26□□□□□ -1.41
USP8-202ENST00000396444 PLEKHD1A6NEE1 506 aa6.26□□□□□ -1.41
USP8-202ENST00000396444 CHMP7Q8WUX9 453 aaPredicted RBP6.26□□□□□ -1.41
USP8-202ENST00000396444 IRX6P78412 446 aaPredicted RBP6.26□□□□□ -1.41
USP8-202ENST00000396444 PAXIP1Q6ZW49 1069 aaPredicted RBP6.25□□□□□ -1.41
USP8-202ENST00000396444 MRS2Q9HD23 443 aa6.25□□□□□ -1.41
USP8-202ENST00000396444 HFM1A2PYH4 1435 aa6.25□□□□□ -1.41
USP8-202ENST00000396444 FAM193AP78312 1265 aa6.25□□□□□ -1.41
USP8-202ENST00000396444 GOLGA6L1Q8N7Z2 621 aa6.25□□□□□ -1.41
USP8-202ENST00000396444 TULP1O00294 542 aaPredicted RBP6.25□□□□□ -1.41
USP8-202ENST00000396444 MCM5P33992 734 aa6.24□□□□□ -1.41
USP8-202ENST00000396444 LMOD3Q0VAK6 560 aa6.24□□□□□ -1.41
USP8-202ENST00000396444 BCANQ96GW7 911 aa6.24□□□□□ -1.41
USP8-202ENST00000396444 ZNF777Q9ULD5 760 aaPredicted RBP6.24□□□□□ -1.41
USP8-202ENST00000396444 CUX2O14529 1486 aa6.24□□□□□ -1.41
USP8-202ENST00000396444 CGNL1Q0VF96 1302 aa6.24□□□□□ -1.41
USP8-202ENST00000396444 HECW1Q76N89 1606 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 TPM2P07951 284 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
USP8-202ENST00000396444 NOP58Q9Y2X3 529 aaKnown RBP6.23□□□□□ -1.41
USP8-202ENST00000396444 MCM2P49736 904 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
USP8-202ENST00000396444 CREBRFQ8IUR6 639 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 KIF21BO75037 1637 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 PODXL2Q9NZ53 605 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 SUPT6HQ7KZ85 1726 aaKnown RBP6.23□□□□□ -1.41
USP8-202ENST00000396444 PLEKHH2Q8IVE3 1493 aa6.23□□□□□ -1.41
USP8-202ENST00000396444 CNPY4Q8N129 248 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 HNRNPUQ00839 825 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP8-202ENST00000396444 WDR43Q15061 677 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP8-202ENST00000396444 TSPYL1Q9H0U9 437 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 CARMIL1Q5VZK9 1371 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 ATAD2Q6PL18 1390 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 LAMC3Q9Y6N6 1575 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 LETM1O95202 739 aaPredicted RBP6.22□□□□□ -1.41
USP8-202ENST00000396444 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.22□□□□□ -1.41
USP8-202ENST00000396444 BIVM-ERCC5R4GMW8 1640 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 ARHGAP35Q9NRY4 1499 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 CUX1P39880 1505 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 PUS7Q96PZ0 661 aaKnown RBP6.22□□□□□ -1.41
USP8-202ENST00000396444 MCCP23508 829 aa6.22□□□□□ -1.41
USP8-202ENST00000396444 ZRSR1Q15695 479 aaKnown RBP6.22□□□□□ -1.41
USP8-202ENST00000396444 HS1BP3Q53T59 392 aa6.21□□□□□ -1.41
USP8-202ENST00000396444 NOL10Q9BSC4 688 aaKnown RBP6.21□□□□□ -1.41
USP8-202ENST00000396444 RWDD1Q9H446 243 aaPredicted RBP6.21□□□□□ -1.41
USP8-202ENST00000396444 KANK1Q14678 1352 aa6.21□□□□□ -1.41
USP8-202ENST00000396444 CARMIL2Q6F5E8 1435 aa6.21□□□□□ -1.42
USP8-202ENST00000396444 AQRO60306 1485 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■■□□ 16
USP8-202ENST00000396444 P3H3Q8IVL6 736 aa6.21□□□□□ -1.42
USP8-202ENST00000396444 ITSN2Q9NZM3 1697 aa6.21□□□□□ -1.42
USP8-202ENST00000396444 LRRFIP1Q32MZ4 808 aaKnown RBP6.21□□□□□ -1.42
USP8-202ENST00000396444 CANXP27824 592 aaKnown RBP6.21□□□□□ -1.42
USP8-202ENST00000396444 PDCL2Q8N4E4 241 aa6.21□□□□□ -1.42
USP8-202ENST00000396444 FAM184AQ8NB25 1140 aa6.21□□□□□ -1.42
USP8-202ENST00000396444 PMFBP1Q8TBY8 1022 aa6.2□□□□□ -1.42
USP8-202ENST00000396444 CIZ1Q9ULV3 898 aaPredicted RBP6.2□□□□□ -1.42
USP8-202ENST00000396444 TOP2BQ02880 1626 aa6.2□□□□□ -1.42
USP8-202ENST00000396444 PPP1R15AO75807 674 aaPredicted RBP6.2□□□□□ -1.42
USP8-202ENST00000396444 TUBBP07437 444 aa6.2□□□□□ -1.42
USP8-202ENST00000396444 DNMBPQ6XZF7 1577 aa6.2□□□□□ -1.42
USP8-202ENST00000396444 NCAPD3P42695 1498 aa6.2□□□□□ -1.42
USP8-202ENST00000396444 KIF15Q9NS87 1388 aa6.2□□□□□ -1.42
USP8-202ENST00000396444 TMF1P82094 1093 aa6.19□□□□□ -1.42
USP8-202ENST00000396444 ANKRD30BQ9BXX2 1392 aa6.19□□□□□ -1.42
USP8-202ENST00000396444 ARID3CA6NKF2 412 aa6.19□□□□□ -1.42
USP8-202ENST00000396444 TMED8Q6PL24 325 aaPredicted RBP6.19□□□□□ -1.42
USP8-202ENST00000396444 TICAM2Q86XR7 235 aa6.19□□□□□ -1.42
USP8-202ENST00000396444 RRBP1Q9P2E9 1410 aaKnown RBP6.19□□□□□ -1.42
USP8-202ENST00000396444 ATAD2BQ9ULI0 1458 aa6.19□□□□□ -1.42
USP8-202ENST00000396444 DHX57Q6P158 1386 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms