RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 UHRF1BP1LA0JNW5 1464 aa15.01□□□□□ -0.01
TUBB-208ENST00000396389 CFAP43Q8NDM7 1665 aa15□□□□□ -0.01
TUBB-208ENST00000396389 HNRNPMP52272 730 aaKnown RBP eCLIP14.99□□□□□ -0.01
TUBB-208ENST00000396389 WDR7Q9Y4E6 1490 aa14.99□□□□□ -0.01
TUBB-208ENST00000396389 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
TUBB-208ENST00000396389 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
TUBB-208ENST00000396389 MAP3K1Q13233 1512 aa14.95□□□□□ -0.02
TUBB-208ENST00000396389 MYOM3Q5VTT5 1437 aa14.94□□□□□ -0.02
TUBB-208ENST00000396389 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
TUBB-208ENST00000396389 TTC37Q6PGP7 1564 aa14.93□□□□□ -0.02
TUBB-208ENST00000396389 FGD6Q6ZV73 1430 aa14.93□□□□□ -0.02
TUBB-208ENST00000396389 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
TUBB-208ENST00000396389 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
TUBB-208ENST00000396389 SUPT6HQ7KZ85 1726 aaKnown RBP14.92□□□□□ -0.02
TUBB-208ENST00000396389 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.92□□□□□ -0.027e-12■□□□□ 8.9
TUBB-208ENST00000396389 AFAP1Q8N556 730 aa14.91□□□□□ -0.02
TUBB-208ENST00000396389 CD109Q6YHK3 1445 aa14.9□□□□□ -0.02
TUBB-208ENST00000396389 RAPGEF3O95398 923 aa14.9□□□□□ -0.02
TUBB-208ENST00000396389 ARHGAP5Q13017 1502 aa14.9□□□□□ -0.02
TUBB-208ENST00000396389 EFCAB2Q5VUJ9 269 aa14.88□□□□□ -0.03
TUBB-208ENST00000396389 ABCC10Q5T3U5 1492 aa14.88□□□□□ -0.03
TUBB-208ENST00000396389 TSHZ2Q9NRE2 1034 aa14.88□□□□□ -0.03
TUBB-208ENST00000396389 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
TUBB-208ENST00000396389 RRBP1Q9P2E9 1410 aaKnown RBP14.84□□□□□ -0.03
TUBB-208ENST00000396389 PTPRKQ15262 1439 aa14.84□□□□□ -0.03
TUBB-208ENST00000396389 TSPOAP1O95153 1857 aa14.84□□□□□ -0.03
TUBB-208ENST00000396389 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.03
TUBB-208ENST00000396389 FANCAO15360 1455 aa14.83□□□□□ -0.04
TUBB-208ENST00000396389 PLCH2O75038 1416 aa14.82□□□□□ -0.04
TUBB-208ENST00000396389 CAMSAP2Q08AD1 1489 aa14.82□□□□□ -0.04
TUBB-208ENST00000396389 TSPY4P0CV99 314 aa14.81□□□□□ -0.04
TUBB-208ENST00000396389 TSPY10P0CW01 314 aa14.81□□□□□ -0.04
TUBB-208ENST00000396389 BCANQ96GW7 911 aa14.81□□□□□ -0.04
TUBB-208ENST00000396389 MAPKBP1O60336 1514 aa14.81□□□□□ -0.04
TUBB-208ENST00000396389 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
TUBB-208ENST00000396389 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
TUBB-208ENST00000396389 CDC42BPAQ5VT25 1732 aa14.79□□□□□ -0.04
TUBB-208ENST00000396389 SYCP2Q9BX26 1530 aa14.78□□□□□ -0.04
TUBB-208ENST00000396389 TRAPPC8Q9Y2L5 1435 aa14.78□□□□□ -0.04
TUBB-208ENST00000396389 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.04
TUBB-208ENST00000396389 MIA2Q96PC5 1412 aa14.77□□□□□ -0.05
TUBB-208ENST00000396389 DIP2BQ9P265 1576 aa14.77□□□□□ -0.05
TUBB-208ENST00000396389 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
TUBB-208ENST00000396389 ABCC5O15440 1437 aa14.76□□□□□ -0.05
TUBB-208ENST00000396389 AKNAQ7Z591 1439 aa14.76□□□□□ -0.05
TUBB-208ENST00000396389 CDC42BPBQ9Y5S2 1711 aa14.76□□□□□ -0.05
TUBB-208ENST00000396389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.053e-7■■■■□ 23.4
TUBB-208ENST00000396389 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
TUBB-208ENST00000396389 TRIM52Q96A61 297 aa14.75□□□□□ -0.05
TUBB-208ENST00000396389 DAPK1P53355 1430 aa14.74□□□□□ -0.05
TUBB-208ENST00000396389 SPAG9O60271 1321 aaKnown RBP14.74□□□□□ -0.05
TUBB-208ENST00000396389 ABCA9Q8IUA7 1624 aa14.73□□□□□ -0.05
TUBB-208ENST00000396389 MYO5CQ9NQX4 1742 aa14.73□□□□□ -0.05
TUBB-208ENST00000396389 PREX2Q70Z35 1606 aa14.72□□□□□ -0.05
TUBB-208ENST00000396389 MBD5Q9P267 1494 aa14.7□□□□□ -0.06
TUBB-208ENST00000396389 ITSN2Q9NZM3 1697 aa14.7□□□□□ -0.06
TUBB-208ENST00000396389 MLECQ14165 292 aa14.7□□□□□ -0.06
TUBB-208ENST00000396389 RAB3GAP2Q9H2M9 1393 aa14.69□□□□□ -0.06
TUBB-208ENST00000396389 C9orf84Q5VXU9 1444 aa14.69□□□□□ -0.06
TUBB-208ENST00000396389 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
TUBB-208ENST00000396389 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
TUBB-208ENST00000396389 FOXD1Q16676 465 aa14.69□□□□□ -0.06
TUBB-208ENST00000396389 TCOF1Q13428 1488 aaKnown RBP14.68□□□□□ -0.06
TUBB-208ENST00000396389 CCDC141Q6ZP82 1450 aa14.66□□□□□ -0.06
TUBB-208ENST00000396389 KIF13AQ9H1H9 1805 aa14.66□□□□□ -0.06
TUBB-208ENST00000396389 KIF15Q9NS87 1388 aa14.66□□□□□ -0.06
TUBB-208ENST00000396389 GGT6Q6P531 493 aa14.65□□□□□ -0.06
TUBB-208ENST00000396389 ABCC1P33527 1531 aa14.64□□□□□ -0.07
TUBB-208ENST00000396389 MAP3K4Q9Y6R4 1608 aa14.64□□□□□ -0.07
TUBB-208ENST00000396389 ARID4BQ4LE39 1312 aaPredicted RBP14.64□□□□□ -0.07
TUBB-208ENST00000396389 KIF3BO15066 747 aa14.64□□□□□ -0.07
TUBB-208ENST00000396389 ANKRD30AQ9BXX3 1397 aa14.64□□□□□ -0.07
TUBB-208ENST00000396389 DENND4BO75064 1496 aaPredicted RBP14.63□□□□□ -0.07
TUBB-208ENST00000396389 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
TUBB-208ENST00000396389 SETD5Q9C0A6 1442 aa14.63□□□□□ -0.07
TUBB-208ENST00000396389 NAIPQ13075 1403 aa14.63□□□□□ -0.07
TUBB-208ENST00000396389 YEATS2Q9ULM3 1422 aa14.63□□□□□ -0.07
TUBB-208ENST00000396389 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
TUBB-208ENST00000396389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.62□□□□□ -0.07
TUBB-208ENST00000396389 GLI2P10070 1586 aa14.61□□□□□ -0.07
TUBB-208ENST00000396389 RSPH4AQ5TD94 716 aa14.61□□□□□ -0.07
TUBB-208ENST00000396389 DNMT1P26358 1616 aaKnown RBP14.61□□□□□ -0.07
TUBB-208ENST00000396389 POGZQ7Z3K3 1410 aa14.61□□□□□ -0.07
TUBB-208ENST00000396389 FKBP8Q14318 412 aa14.6□□□□□ -0.07
TUBB-208ENST00000396389 KDM6BO15054 1643 aa14.6□□□□□ -0.07
TUBB-208ENST00000396389 PLEKHH2Q8IVE3 1493 aa14.6□□□□□ -0.07
TUBB-208ENST00000396389 TEX14Q8IWB6 1497 aa14.6□□□□□ -0.07
TUBB-208ENST00000396389 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
TUBB-208ENST00000396389 NEO1Q92859 1461 aa14.59□□□□□ -0.07
TUBB-208ENST00000396389 ANKRD50Q9ULJ7 1429 aa14.58□□□□□ -0.08
TUBB-208ENST00000396389 PPRC1Q5VV67 1664 aaKnown RBP14.58□□□□□ -0.08
TUBB-208ENST00000396389 HFM1A2PYH4 1435 aa14.57□□□□□ -0.08
TUBB-208ENST00000396389 SLC4A1APQ9BWU0 796 aaKnown RBP14.57□□□□□ -0.08
TUBB-208ENST00000396389 NUP155O75694 1391 aa14.56□□□□□ -0.08
TUBB-208ENST00000396389 ARAP3Q8WWN8 1544 aa14.54□□□□□ -0.08
TUBB-208ENST00000396389 CLSPNQ9HAW4 1339 aa14.54□□□□□ -0.08
TUBB-208ENST00000396389 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
TUBB-208ENST00000396389 RBM19Q9Y4C8 960 aaKnown RBP14.53□□□□□ -0.08
TUBB-208ENST00000396389 ATP7AQ04656 1500 aa14.53□□□□□ -0.08
TUBB-208ENST00000396389 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms