RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ADAMTSL3P82987 1691 aa29.61■■■□□ 2.33
FXN-203ENST00000396366 ZMYM4Q5VZL5 1548 aa29.61■■■□□ 2.33
FXN-203ENST00000396366 POGZQ7Z3K3 1410 aa29.6■■■□□ 2.33
FXN-203ENST00000396366 ARHGAP5Q13017 1502 aa29.6■■■□□ 2.33
FXN-203ENST00000396366 BCORL1Q5H9F3 1711 aa29.58■■■□□ 2.33
FXN-203ENST00000396366 ZFYVE16Q7Z3T8 1539 aa29.57■■■□□ 2.32
FXN-203ENST00000396366 CDC42BPBQ9Y5S2 1711 aa29.57■■■□□ 2.32
FXN-203ENST00000396366 SIGLEC1Q9BZZ2 1709 aa29.55■■■□□ 2.32
FXN-203ENST00000396366 HECW2Q9P2P5 1572 aa29.53■■■□□ 2.32
FXN-203ENST00000396366 PTPRMP28827 1452 aa29.53■■■□□ 2.32
FXN-203ENST00000396366 MAGI2Q86UL8 1455 aa29.53■■■□□ 2.32
FXN-203ENST00000396366 AFAP1Q8N556 730 aa29.52■■■□□ 2.32
FXN-203ENST00000396366 MADDQ8WXG6 1647 aa29.52■■■□□ 2.32
FXN-203ENST00000396366 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
FXN-203ENST00000396366 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
FXN-203ENST00000396366 PREX2Q70Z35 1606 aa29.49■■■□□ 2.31
FXN-203ENST00000396366 CDC42BPAQ5VT25 1732 aa29.46■■■□□ 2.31
FXN-203ENST00000396366 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
FXN-203ENST00000396366 MLECQ14165 292 aa29.44■■■□□ 2.3
FXN-203ENST00000396366 ARHGEF12Q9NZN5 1544 aa29.44■■■□□ 2.3
FXN-203ENST00000396366 ATP10AO60312 1499 aa29.42■■■□□ 2.3
FXN-203ENST00000396366 RIMS1Q86UR5 1692 aaKnown RBP29.42■■■□□ 2.3
FXN-203ENST00000396366 KDM5CP41229 1560 aa29.41■■■□□ 2.3
FXN-203ENST00000396366 TRAPPC8Q9Y2L5 1435 aa29.4■■■□□ 2.3
FXN-203ENST00000396366 MYT1LQ9UL68 1186 aa29.4■■■□□ 2.3
FXN-203ENST00000396366 ZNF777Q9ULD5 760 aaPredicted RBP29.4■■■□□ 2.3
FXN-203ENST00000396366 ABCC1P33527 1531 aa29.39■■■□□ 2.3
FXN-203ENST00000396366 GPATCH8Q9UKJ3 1502 aaKnown RBP29.39■■■□□ 2.3
FXN-203ENST00000396366 PLPPR3Q6T4P5 718 aa29.37■■■□□ 2.29
FXN-203ENST00000396366 C9orf84Q5VXU9 1444 aa29.37■■■□□ 2.29
FXN-203ENST00000396366 ITSN2Q9NZM3 1697 aa29.36■■■□□ 2.29
FXN-203ENST00000396366 MTUS2Q5JR59 1369 aa29.35■■■□□ 2.29
FXN-203ENST00000396366 SAMD9LQ8IVG5 1584 aa29.32■■■□□ 2.28
FXN-203ENST00000396366 DIP2CQ9Y2E4 1556 aa29.31■■■□□ 2.28
FXN-203ENST00000396366 MLH3Q9UHC1 1453 aa29.3■■■□□ 2.28
FXN-203ENST00000396366 CCNB3Q8WWL7 1395 aa29.3■■■□□ 2.28
FXN-203ENST00000396366 HNRNPMP52272 730 aaKnown RBP eCLIP29.29■■■□□ 2.28
FXN-203ENST00000396366 ABCA6Q8N139 1617 aa29.29■■■□□ 2.28
FXN-203ENST00000396366 CFDP1Q9UEE9 299 aaPredicted RBP29.28■■■□□ 2.28
FXN-203ENST00000396366 FER1L4A9Z1Z3 1794 aa29.28■■■□□ 2.28
FXN-203ENST00000396366 SYCP2Q9BX26 1530 aa29.25■■■□□ 2.27
FXN-203ENST00000396366 KIDINS220Q9ULH0 1771 aa29.24■■■□□ 2.27
FXN-203ENST00000396366 EHBP1L1Q8N3D4 1523 aa29.23■■■□□ 2.27
FXN-203ENST00000396366 ZNF644Q9H582 1327 aaPredicted RBP29.2■■■□□ 2.27
FXN-203ENST00000396366 LMTK3Q96Q04 1460 aa29.2■■■□□ 2.26
FXN-203ENST00000396366 TIAM1Q13009 1591 aa29.2■■■□□ 2.26
FXN-203ENST00000396366 REREQ9P2R6 1566 aa29.19■■■□□ 2.26
FXN-203ENST00000396366 CEBPAP49715 358 aaPredicted RBP29.19■■■□□ 2.26
FXN-203ENST00000396366 KIAA1107Q9UPP5 1409 aa29.17■■■□□ 2.26
FXN-203ENST00000396366 SPAG9O60271 1321 aaKnown RBP29.17■■■□□ 2.26
FXN-203ENST00000396366 VPS8Q8N3P4 1428 aa29.15■■■□□ 2.26
FXN-203ENST00000396366 HSPA2P54652 639 aa29.14■■■□□ 2.26
FXN-203ENST00000396366 PLEKHH2Q8IVE3 1493 aa29.14■■■□□ 2.26
FXN-203ENST00000396366 AGLP35573 1532 aa29.12■■■□□ 2.25
FXN-203ENST00000396366 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
FXN-203ENST00000396366 ATP7AQ04656 1500 aa29.08■■■□□ 2.25
FXN-203ENST00000396366 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
FXN-203ENST00000396366 INO80Q9ULG1 1556 aaPredicted RBP29.06■■■□□ 2.24
FXN-203ENST00000396366 MBD5Q9P267 1494 aa29.06■■■□□ 2.24
FXN-203ENST00000396366 ILDR1Q86SU0 546 aaPredicted RBP29.06■■■□□ 2.24
FXN-203ENST00000396366 KANK4Q5T7N3 995 aaPredicted RBP29.04■■■□□ 2.24
FXN-203ENST00000396366 LRRC9Q6ZRR7 1453 aa29.03■■■□□ 2.24
FXN-203ENST00000396366 ESF1Q9H501 851 aaKnown RBP29.01■■■□□ 2.23
FXN-203ENST00000396366 C3P01024 1663 aa28.99■■■□□ 2.23
FXN-203ENST00000396366 A2MP01023 1474 aa28.98■■■□□ 2.23
FXN-203ENST00000396366 CAMSAP2Q08AD1 1489 aa28.97■■■□□ 2.23
FXN-203ENST00000396366 PREX1Q8TCU6 1659 aa28.96■■■□□ 2.23
FXN-203ENST00000396366 PLXNC1O60486 1568 aa28.96■■■□□ 2.23
FXN-203ENST00000396366 MAP3K1Q13233 1512 aa28.93■■■□□ 2.22
FXN-203ENST00000396366 ADGBQ8N7X0 1667 aa28.91■■■□□ 2.22
FXN-203ENST00000396366 GGT6Q6P531 493 aa28.91■■■□□ 2.22
FXN-203ENST00000396366 SETD1BQ9UPS6 1966 aaKnown RBP28.9■■■□□ 2.22
FXN-203ENST00000396366 RTEL1-TNFRSF6BF6WH68 1400 aa28.9■■■□□ 2.22
FXN-203ENST00000396366 CCDC141Q6ZP82 1450 aa28.9■■■□□ 2.22
FXN-203ENST00000396366 CNTLNQ9NXG0 1405 aa28.89■■■□□ 2.22
FXN-203ENST00000396366 UHRF1BP1Q6BDS2 1440 aa28.87■■■□□ 2.21
FXN-203ENST00000396366 ZMYM3Q14202 1370 aa28.87■■■□□ 2.21
FXN-203ENST00000396366 CLTCQ00610 1675 aaKnown RBP28.86■■■□□ 2.21
FXN-203ENST00000396366 RSPH4AQ5TD94 716 aa28.85■■■□□ 2.21
FXN-203ENST00000396366 DHX29Q7Z478 1369 aaKnown RBP28.85■■■□□ 2.21
FXN-203ENST00000396366 MROH2AA6NES4 1674 aa28.83■■■□□ 2.21
FXN-203ENST00000396366 ARHGEF5Q12774 1597 aa28.82■■■□□ 2.2
FXN-203ENST00000396366 MYOM3Q5VTT5 1437 aa28.79■■■□□ 2.2
FXN-203ENST00000396366 TSPY4P0CV99 314 aa28.79■■■□□ 2.2
FXN-203ENST00000396366 TSPY10P0CW01 314 aa28.79■■■□□ 2.2
FXN-203ENST00000396366 APLP2Q06481 763 aa28.79■■■□□ 2.2
FXN-203ENST00000396366 STRCQ7RTU9 1775 aa28.78■■■□□ 2.2
FXN-203ENST00000396366 KIF3BO15066 747 aa28.77■■■□□ 2.2
FXN-203ENST00000396366 MIA2Q96PC5 1412 aa28.75■■■□□ 2.19
FXN-203ENST00000396366 PPP6R1Q9UPN7 881 aa28.74■■■□□ 2.19
FXN-203ENST00000396366 NPATQ14207 1427 aa28.74■■■□□ 2.19
FXN-203ENST00000396366 PTPRKQ15262 1439 aa28.71■■■□□ 2.19
FXN-203ENST00000396366 FBXO41Q8TF61 875 aa28.69■■■□□ 2.18
FXN-203ENST00000396366 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
FXN-203ENST00000396366 DMRT2Q9Y5R5 561 aa28.65■■■□□ 2.18
FXN-203ENST00000396366 FBXO31Q5XUX0 539 aaPredicted RBP28.64■■■□□ 2.18
FXN-203ENST00000396366 WASHC2CQ9Y4E1 1318 aa28.63■■■□□ 2.17
FXN-203ENST00000396366 MYO3AQ8NEV4 1616 aa28.62■■■□□ 2.17
FXN-203ENST00000396366 PTPN23Q9H3S7 1636 aa28.62■■■□□ 2.17
FXN-203ENST00000396366 CERKQ8TCT0 537 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms