RNA–Protein interactions for RNA: ENST00000395460.6

C11orf49-204, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 1 (best) BASIC

Gene C11orf49, Length 1,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-204ENST00000395460 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
C11orf49-204ENST00000395460 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
C11orf49-204ENST00000395460 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
C11orf49-204ENST00000395460 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
C11orf49-204ENST00000395460 CNTLNQ9NXG0 1405 aa23.13■■□□□ 1.29
C11orf49-204ENST00000395460 TEX14Q8IWB6 1497 aa23.12■■□□□ 1.29
C11orf49-204ENST00000395460 L3MBTL2Q969R5 705 aa23.12■■□□□ 1.29
C11orf49-204ENST00000395460 NCOA1Q15788 1441 aa23.12■■□□□ 1.29
C11orf49-204ENST00000395460 TROQ12816 1431 aaPredicted RBP23.11■■□□□ 1.29
C11orf49-204ENST00000395460 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
C11orf49-204ENST00000395460 MAGI1Q96QZ7 1491 aaPredicted RBP23.1■■□□□ 1.29
C11orf49-204ENST00000395460 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.29
C11orf49-204ENST00000395460 ADCY10Q96PN6 1610 aa23.07■■□□□ 1.28
C11orf49-204ENST00000395460 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
C11orf49-204ENST00000395460 CCDC7Q96M83 1385 aa23.05■■□□□ 1.28
C11orf49-204ENST00000395460 SPATA31E1Q6ZUB1 1445 aa23.04■■□□□ 1.28
C11orf49-204ENST00000395460 CAMSAP2Q08AD1 1489 aa23.03■■□□□ 1.28
C11orf49-204ENST00000395460 ADGBQ8N7X0 1667 aa23.03■■□□□ 1.28
C11orf49-204ENST00000395460 BCANQ96GW7 911 aa23.03■■□□□ 1.28
C11orf49-204ENST00000395460 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
C11orf49-204ENST00000395460 PZPP20742 1482 aa23■■□□□ 1.27
C11orf49-204ENST00000395460 POLR1AO95602 1720 aaPredicted RBP23■■□□□ 1.27
C11orf49-204ENST00000395460 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
C11orf49-204ENST00000395460 ARID3CA6NKF2 412 aa23■■□□□ 1.27
C11orf49-204ENST00000395460 ZNF644Q9H582 1327 aaPredicted RBP23■■□□□ 1.27
C11orf49-204ENST00000395460 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
C11orf49-204ENST00000395460 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
C11orf49-204ENST00000395460 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
C11orf49-204ENST00000395460 FOXD1Q16676 465 aa22.98■■□□□ 1.27
C11orf49-204ENST00000395460 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
C11orf49-204ENST00000395460 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
C11orf49-204ENST00000395460 MBD5Q9P267 1494 aa22.96■■□□□ 1.27
C11orf49-204ENST00000395460 NBPF8Q3BBV2 869 aa22.96■■□□□ 1.27
C11orf49-204ENST00000395460 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
C11orf49-204ENST00000395460 ERICH6BQ5W0A0 696 aa22.96■■□□□ 1.27
C11orf49-204ENST00000395460 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
C11orf49-204ENST00000395460 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
C11orf49-204ENST00000395460 NUP160Q12769 1436 aa22.95■■□□□ 1.26
C11orf49-204ENST00000395460 KIAA1107Q9UPP5 1409 aa22.94■■□□□ 1.26
C11orf49-204ENST00000395460 C11orf95C9JLR9 678 aaPredicted RBP22.93■■□□□ 1.26
C11orf49-204ENST00000395460 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
C11orf49-204ENST00000395460 SHANK2Q9UPX8 1470 aa22.91■■□□□ 1.26
C11orf49-204ENST00000395460 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
C11orf49-204ENST00000395460 KIF14Q15058 1648 aa22.9■■□□□ 1.26
C11orf49-204ENST00000395460 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
C11orf49-204ENST00000395460 KIF7Q2M1P5 1343 aa22.89■■□□□ 1.25
C11orf49-204ENST00000395460 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
C11orf49-204ENST00000395460 ABCA8O94911 1581 aa22.86■■□□□ 1.25
C11orf49-204ENST00000395460 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
C11orf49-204ENST00000395460 KDM5DQ9BY66 1539 aa22.84■■□□□ 1.25
C11orf49-204ENST00000395460 ZBED9Q6R2W3 1325 aa22.84■■□□□ 1.25
C11orf49-204ENST00000395460 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
C11orf49-204ENST00000395460 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
C11orf49-204ENST00000395460 UHRF1BP1Q6BDS2 1440 aa22.83■■□□□ 1.25
C11orf49-204ENST00000395460 JPH4Q96JJ6 628 aa22.82■■□□□ 1.24
C11orf49-204ENST00000395460 ANP32EQ9BTT0 268 aa22.82■■□□□ 1.24
C11orf49-204ENST00000395460 RBM19Q9Y4C8 960 aaKnown RBP22.8■■□□□ 1.24
C11orf49-204ENST00000395460 ARHGEF12Q9NZN5 1544 aa22.8■■□□□ 1.24
C11orf49-204ENST00000395460 CCDC184Q52MB2 194 aa22.8■■□□□ 1.24
C11orf49-204ENST00000395460 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
C11orf49-204ENST00000395460 CDC42BPAQ5VT25 1732 aa22.79■■□□□ 1.24
C11orf49-204ENST00000395460 USP47Q96K76 1375 aa22.78■■□□□ 1.24
C11orf49-204ENST00000395460 PLEKHD1A6NEE1 506 aa22.78■■□□□ 1.24
C11orf49-204ENST00000395460 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
C11orf49-204ENST00000395460 KDM5CP41229 1560 aa22.77■■□□□ 1.24
C11orf49-204ENST00000395460 PKD2Q13563 968 aa22.77■■□□□ 1.24
C11orf49-204ENST00000395460 ATP10BO94823 1461 aa22.77■■□□□ 1.24
C11orf49-204ENST00000395460 RALGAPBQ86X10 1494 aa22.77■■□□□ 1.24
C11orf49-204ENST00000395460 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
C11orf49-204ENST00000395460 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
C11orf49-204ENST00000395460 ROCK2O75116 1388 aaKnown RBP22.75■■□□□ 1.23
C11orf49-204ENST00000395460 PTPRGP23470 1445 aa22.74■■□□□ 1.23
C11orf49-204ENST00000395460 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
C11orf49-204ENST00000395460 PPP4R2Q9NY27 417 aa22.71■■□□□ 1.23
C11orf49-204ENST00000395460 BCORL1Q5H9F3 1711 aa22.71■■□□□ 1.23
C11orf49-204ENST00000395460 FAM9BQ8IZU0 186 aa22.7■■□□□ 1.23
C11orf49-204ENST00000395460 NUP155O75694 1391 aa22.7■■□□□ 1.22
C11orf49-204ENST00000395460 TSPY4P0CV99 314 aa22.67■■□□□ 1.22
C11orf49-204ENST00000395460 TSPY10P0CW01 314 aa22.67■■□□□ 1.22
C11orf49-204ENST00000395460 FBLN2P98095 1184 aa22.67■■□□□ 1.22
C11orf49-204ENST00000395460 KIF15Q9NS87 1388 aa22.64■■□□□ 1.22
C11orf49-204ENST00000395460 RSPH4AQ5TD94 716 aa22.64■■□□□ 1.21
C11orf49-204ENST00000395460 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
C11orf49-204ENST00000395460 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
C11orf49-204ENST00000395460 CCDC141Q6ZP82 1450 aa22.62■■□□□ 1.21
C11orf49-204ENST00000395460 FANCIQ9NVI1 1328 aa22.62■■□□□ 1.21
C11orf49-204ENST00000395460 PREX2Q70Z35 1606 aa22.6■■□□□ 1.21
C11orf49-204ENST00000395460 IRX6P78412 446 aaPredicted RBP22.6■■□□□ 1.21
C11orf49-204ENST00000395460 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
C11orf49-204ENST00000395460 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
C11orf49-204ENST00000395460 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
C11orf49-204ENST00000395460 CARD11Q9BXL7 1154 aa22.57■■□□□ 1.2
C11orf49-204ENST00000395460 FAM135AQ9P2D6 1515 aa22.55■■□□□ 1.2
C11orf49-204ENST00000395460 RNF123Q5XPI4 1314 aa22.55■■□□□ 1.2
C11orf49-204ENST00000395460 CDC42BPBQ9Y5S2 1711 aa22.53■■□□□ 1.2
C11orf49-204ENST00000395460 NUDCQ9Y266 331 aa22.53■■□□□ 1.2
C11orf49-204ENST00000395460 E9PCH4 1651 aa22.52■■□□□ 1.2
C11orf49-204ENST00000395460 UNC13BO14795 1591 aa22.51■■□□□ 1.19
C11orf49-204ENST00000395460 HNRNPMP52272 730 aaKnown RBP eCLIP22.51■■□□□ 1.19
C11orf49-204ENST00000395460 PNISRQ8TF01 805 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms