RNA–Protein interactions for RNA: ENST00000394990.8

SMIM29-202, Transcript of small integral membrane protein 29, humanhuman

TSL 1 (best) BASIC

Gene SMIM29, Length 792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-202ENST00000394990 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
SMIM29-202ENST00000394990 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
SMIM29-202ENST00000394990 HECW1Q76N89 1606 aa23.33■■□□□ 1.32
SMIM29-202ENST00000394990 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
SMIM29-202ENST00000394990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.32
SMIM29-202ENST00000394990 LTBP4Q8N2S1 1624 aa23.3■■□□□ 1.32
SMIM29-202ENST00000394990 PTPRTO14522 1441 aa23.29■■□□□ 1.32
SMIM29-202ENST00000394990 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
SMIM29-202ENST00000394990 ATP10AO60312 1499 aa23.24■■□□□ 1.31
SMIM29-202ENST00000394990 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
SMIM29-202ENST00000394990 PLEKHD1A6NEE1 506 aa23.24■■□□□ 1.31
SMIM29-202ENST00000394990 C9orf84Q5VXU9 1444 aa23.23■■□□□ 1.31
SMIM29-202ENST00000394990 SCAPERQ9BY12 1400 aa23.22■■□□□ 1.31
SMIM29-202ENST00000394990 SETD1BQ9UPS6 1966 aaKnown RBP23.17■■□□□ 1.3
SMIM29-202ENST00000394990 PLCH2O75038 1416 aa23.14■■□□□ 1.29
SMIM29-202ENST00000394990 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
SMIM29-202ENST00000394990 C3P01024 1663 aa23.08■■□□□ 1.29
SMIM29-202ENST00000394990 TRAPPC8Q9Y2L5 1435 aa23.04■■□□□ 1.28
SMIM29-202ENST00000394990 UBAP1LF5GYI3 381 aa23.03■■□□□ 1.28
SMIM29-202ENST00000394990 KDM5CP41229 1560 aa23.02■■□□□ 1.28
SMIM29-202ENST00000394990 ZNF518AQ6AHZ1 1483 aa23.02■■□□□ 1.28
SMIM29-202ENST00000394990 CDK13Q14004 1512 aaKnown RBP23.02■■□□□ 1.28
SMIM29-202ENST00000394990 RANGAP1P46060 587 aaPredicted RBP23.01■■□□□ 1.27
SMIM29-202ENST00000394990 EFCAB2Q5VUJ9 269 aa23.01■■□□□ 1.27
SMIM29-202ENST00000394990 REREQ9P2R6 1566 aa23.01■■□□□ 1.27
SMIM29-202ENST00000394990 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
SMIM29-202ENST00000394990 AFAP1Q8N556 730 aa23■■□□□ 1.27
SMIM29-202ENST00000394990 ZNF335Q9H4Z2 1342 aaPredicted RBP23■■□□□ 1.27
SMIM29-202ENST00000394990 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
SMIM29-202ENST00000394990 MED1Q15648 1581 aaPredicted RBP22.95■■□□□ 1.26
SMIM29-202ENST00000394990 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
SMIM29-202ENST00000394990 AGLP35573 1532 aa22.94■■□□□ 1.26
SMIM29-202ENST00000394990 ABCA6Q8N139 1617 aa22.93■■□□□ 1.26
SMIM29-202ENST00000394990 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
SMIM29-202ENST00000394990 NCKAP5LQ9HCH0 1330 aa22.92■■□□□ 1.26
SMIM29-202ENST00000394990 MLH3Q9UHC1 1453 aa22.91■■□□□ 1.26
SMIM29-202ENST00000394990 ESF1Q9H501 851 aaKnown RBP22.9■■□□□ 1.26
SMIM29-202ENST00000394990 HSPA1LP34931 641 aa22.88■■□□□ 1.25
SMIM29-202ENST00000394990 MYT1LQ9UL68 1186 aa22.88■■□□□ 1.25
SMIM29-202ENST00000394990 NPATQ14207 1427 aa22.88■■□□□ 1.25
SMIM29-202ENST00000394990 CNTLNQ9NXG0 1405 aa22.88■■□□□ 1.25
SMIM29-202ENST00000394990 KIF14Q15058 1648 aa22.87■■□□□ 1.25
SMIM29-202ENST00000394990 ARHGAP5Q13017 1502 aa22.87■■□□□ 1.25
SMIM29-202ENST00000394990 PLA2R1Q13018 1463 aa22.82■■□□□ 1.24
SMIM29-202ENST00000394990 TCOF1Q13428 1488 aaKnown RBP22.82■■□□□ 1.24
SMIM29-202ENST00000394990 PKD2Q13563 968 aa22.81■■□□□ 1.24
SMIM29-202ENST00000394990 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
SMIM29-202ENST00000394990 MROH2AA6NES4 1674 aa22.79■■□□□ 1.24
SMIM29-202ENST00000394990 TROQ12816 1431 aaPredicted RBP22.77■■□□□ 1.24
SMIM29-202ENST00000394990 ZNF142P52746 1687 aaPredicted RBP22.77■■□□□ 1.24
SMIM29-202ENST00000394990 PIP4K2BP78356 416 aa22.76■■□□□ 1.23
SMIM29-202ENST00000394990 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
SMIM29-202ENST00000394990 KIDINS220Q9ULH0 1771 aa22.76■■□□□ 1.23
SMIM29-202ENST00000394990 ABCC1P33527 1531 aa22.75■■□□□ 1.23
SMIM29-202ENST00000394990 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
SMIM29-202ENST00000394990 CDC42BPBQ9Y5S2 1711 aa22.74■■□□□ 1.23
SMIM29-202ENST00000394990 CDK11AQ9UQ88 783 aaPredicted RBP22.74■■□□□ 1.23
SMIM29-202ENST00000394990 CEP170BQ9Y4F5 1589 aaPredicted RBP22.73■■□□□ 1.23
SMIM29-202ENST00000394990 PPP6R1Q9UPN7 881 aa22.73■■□□□ 1.23
SMIM29-202ENST00000394990 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
SMIM29-202ENST00000394990 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
SMIM29-202ENST00000394990 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
SMIM29-202ENST00000394990 TOM1O60784 492 aa22.7■■□□□ 1.22
SMIM29-202ENST00000394990 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
SMIM29-202ENST00000394990 FMN1Q68DA7 1419 aa22.68■■□□□ 1.22
SMIM29-202ENST00000394990 CLIP1P30622 1438 aa22.67■■□□□ 1.22
SMIM29-202ENST00000394990 PREX2Q70Z35 1606 aa22.67■■□□□ 1.22
SMIM29-202ENST00000394990 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
SMIM29-202ENST00000394990 CPS1P31327 1500 aa22.66■■□□□ 1.22
SMIM29-202ENST00000394990 ALKQ9UM73 1620 aa22.65■■□□□ 1.22
SMIM29-202ENST00000394990 EEA1Q15075 1411 aa22.65■■□□□ 1.22
SMIM29-202ENST00000394990 CLTCQ00610 1675 aaKnown RBP22.65■■□□□ 1.22
SMIM29-202ENST00000394990 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
SMIM29-202ENST00000394990 SHANK2Q9UPX8 1470 aa22.62■■□□□ 1.21
SMIM29-202ENST00000394990 LRRIQ1Q96JM4 1722 aa22.6■■□□□ 1.21
SMIM29-202ENST00000394990 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
SMIM29-202ENST00000394990 DNMT1P26358 1616 aaKnown RBP22.59■■□□□ 1.21
SMIM29-202ENST00000394990 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
SMIM29-202ENST00000394990 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
SMIM29-202ENST00000394990 PLXNC1O60486 1568 aa22.58■■□□□ 1.2
SMIM29-202ENST00000394990 RGS17Q9UGC6 210 aaPredicted RBP22.56■■□□□ 1.2
SMIM29-202ENST00000394990 VWDEQ8N2E2 1590 aa22.54■■□□□ 1.2
SMIM29-202ENST00000394990 SPAG9O60271 1321 aaKnown RBP22.54■■□□□ 1.2
SMIM29-202ENST00000394990 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
SMIM29-202ENST00000394990 POLR1AO95602 1720 aaPredicted RBP22.53■■□□□ 1.2
SMIM29-202ENST00000394990 CDC42BPAQ5VT25 1732 aa22.52■■□□□ 1.2
SMIM29-202ENST00000394990 A2MP01023 1474 aa22.52■■□□□ 1.2
SMIM29-202ENST00000394990 SYCP2Q9BX26 1530 aa22.52■■□□□ 1.19
SMIM29-202ENST00000394990 GGT6Q6P531 493 aa22.51■■□□□ 1.19
SMIM29-202ENST00000394990 ATP7AQ04656 1500 aa22.5■■□□□ 1.19
SMIM29-202ENST00000394990 INO80Q9ULG1 1556 aaPredicted RBP22.48■■□□□ 1.19
SMIM29-202ENST00000394990 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
SMIM29-202ENST00000394990 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
SMIM29-202ENST00000394990 ZNF777Q9ULD5 760 aaPredicted RBP22.46■■□□□ 1.19
SMIM29-202ENST00000394990 MED14O60244 1454 aa22.41■■□□□ 1.18
SMIM29-202ENST00000394990 TNRQ92752 1358 aa22.41■■□□□ 1.18
SMIM29-202ENST00000394990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.41■■□□□ 1.18
SMIM29-202ENST00000394990 ANKLE2Q86XL3 938 aa22.41■■□□□ 1.18
SMIM29-202ENST00000394990 GPATCH8Q9UKJ3 1502 aaKnown RBP22.41■■□□□ 1.18
SMIM29-202ENST00000394990 CCDC18Q5T9S5 1454 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms