RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 NAIPQ13075 1403 aa21.96■■□□□ 1.11
SMARCD1-202ENST00000394963 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
SMARCD1-202ENST00000394963 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
SMARCD1-202ENST00000394963 ANKRD30AQ9BXX3 1397 aa21.93■■□□□ 1.1
SMARCD1-202ENST00000394963 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
SMARCD1-202ENST00000394963 AFAP1Q8N556 730 aa21.93■■□□□ 1.1
SMARCD1-202ENST00000394963 WDR97A6NE52 1622 aa21.92■■□□□ 1.1
SMARCD1-202ENST00000394963 CTTNBP2Q8WZ74 1663 aa21.92■■□□□ 1.1
SMARCD1-202ENST00000394963 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
SMARCD1-202ENST00000394963 GGT6Q6P531 493 aa21.9■■□□□ 1.1
SMARCD1-202ENST00000394963 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.1
SMARCD1-202ENST00000394963 TIMELESSQ9UNS1 1208 aa21.88■■□□□ 1.09
SMARCD1-202ENST00000394963 HFM1A2PYH4 1435 aa21.88■■□□□ 1.09
SMARCD1-202ENST00000394963 EFCAB2Q5VUJ9 269 aa21.88■■□□□ 1.09
SMARCD1-202ENST00000394963 EHBP1L1Q8N3D4 1523 aa21.88■■□□□ 1.09
SMARCD1-202ENST00000394963 NBPF8Q3BBV2 869 aa21.87■■□□□ 1.09
SMARCD1-202ENST00000394963 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
SMARCD1-202ENST00000394963 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
SMARCD1-202ENST00000394963 ADAMTS12P58397 1594 aa21.86■■□□□ 1.09
SMARCD1-202ENST00000394963 HECW1Q76N89 1606 aa21.85■■□□□ 1.09
SMARCD1-202ENST00000394963 SUPT6HQ7KZ85 1726 aaKnown RBP21.85■■□□□ 1.09
SMARCD1-202ENST00000394963 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
SMARCD1-202ENST00000394963 KIF3BO15066 747 aa21.85■■□□□ 1.09
SMARCD1-202ENST00000394963 MAP3K1Q13233 1512 aa21.84■■□□□ 1.09
SMARCD1-202ENST00000394963 MAGI3Q5TCQ9 1506 aa21.84■■□□□ 1.09
SMARCD1-202ENST00000394963 NUP153P49790 1475 aaKnown RBP21.84■■□□□ 1.09
SMARCD1-202ENST00000394963 WDR62O43379 1518 aa21.83■■□□□ 1.09
SMARCD1-202ENST00000394963 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
SMARCD1-202ENST00000394963 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
SMARCD1-202ENST00000394963 NUTM2DQ5VT03 806 aaPredicted RBP21.82■■□□□ 1.08
SMARCD1-202ENST00000394963 PTPN23Q9H3S7 1636 aa21.81■■□□□ 1.08
SMARCD1-202ENST00000394963 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
SMARCD1-202ENST00000394963 DAPK1P53355 1430 aa21.8■■□□□ 1.08
SMARCD1-202ENST00000394963 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
SMARCD1-202ENST00000394963 KIF15Q9NS87 1388 aa21.79■■□□□ 1.08
SMARCD1-202ENST00000394963 TMC1Q8TDI8 760 aa21.78■■□□□ 1.08
SMARCD1-202ENST00000394963 ABCC5O15440 1437 aa21.78■■□□□ 1.08
SMARCD1-202ENST00000394963 MLECQ14165 292 aa21.78■■□□□ 1.08
SMARCD1-202ENST00000394963 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
SMARCD1-202ENST00000394963 SPAG9O60271 1321 aaKnown RBP21.77■■□□□ 1.08
SMARCD1-202ENST00000394963 ST20-MTHFSA0A0A6YYL1 179 aa21.75■■□□□ 1.07
SMARCD1-202ENST00000394963 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
SMARCD1-202ENST00000394963 CC2D1BQ5T0F9 858 aaKnown RBP21.73■■□□□ 1.07
SMARCD1-202ENST00000394963 SUPT16HQ9Y5B9 1047 aaKnown RBP21.73■■□□□ 1.07
SMARCD1-202ENST00000394963 WASHC2AQ641Q2 1341 aa21.73■■□□□ 1.07
SMARCD1-202ENST00000394963 MIA2Q96PC5 1412 aa21.71■■□□□ 1.07
SMARCD1-202ENST00000394963 STAG3Q9UJ98 1225 aa21.7■■□□□ 1.06
SMARCD1-202ENST00000394963 ATP10BO94823 1461 aa21.69■■□□□ 1.06
SMARCD1-202ENST00000394963 CFAP43Q8NDM7 1665 aa21.69■■□□□ 1.06
SMARCD1-202ENST00000394963 UGGT2Q9NYU1 1516 aa21.69■■□□□ 1.06
SMARCD1-202ENST00000394963 SAFB2Q14151 953 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMARCD1-202ENST00000394963 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.68■■□□□ 1.067e-6■■■□□ 16.5
SMARCD1-202ENST00000394963 KIAA0556O60303 1618 aa21.68■■□□□ 1.06
SMARCD1-202ENST00000394963 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
SMARCD1-202ENST00000394963 CCDC184Q52MB2 194 aa21.67■■□□□ 1.06
SMARCD1-202ENST00000394963 CAMSAP2Q08AD1 1489 aa21.66■■□□□ 1.06
SMARCD1-202ENST00000394963 C9orf84Q5VXU9 1444 aa21.66■■□□□ 1.06
SMARCD1-202ENST00000394963 CEP170Q5SW79 1584 aa21.66■■□□□ 1.06
SMARCD1-202ENST00000394963 ARHGAP5Q13017 1502 aa21.66■■□□□ 1.06
SMARCD1-202ENST00000394963 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-202ENST00000394963 NBPF1Q3BBV0 1214 aa21.65■■□□□ 1.06
SMARCD1-202ENST00000394963 ROCK2O75116 1388 aaKnown RBP21.64■■□□□ 1.05
SMARCD1-202ENST00000394963 RAPGEF6Q8TEU7 1601 aa21.62■■□□□ 1.05
SMARCD1-202ENST00000394963 TNNT2P45379 298 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-202ENST00000394963 NCOA1Q15788 1441 aa21.61■■□□□ 1.05
SMARCD1-202ENST00000394963 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
SMARCD1-202ENST00000394963 RAPGEF3O95398 923 aa21.58■■□□□ 1.05
SMARCD1-202ENST00000394963 USP47Q96K76 1375 aa21.57■■□□□ 1.04
SMARCD1-202ENST00000394963 RSPH4AQ5TD94 716 aa21.57■■□□□ 1.04
SMARCD1-202ENST00000394963 CCDC144AA2RUR9 1427 aa21.56■■□□□ 1.04
SMARCD1-202ENST00000394963 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
SMARCD1-202ENST00000394963 NUP160Q12769 1436 aa21.55■■□□□ 1.04
SMARCD1-202ENST00000394963 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
SMARCD1-202ENST00000394963 PRKRIP1Q9H875 184 aaPredicted RBP21.53■■□□□ 1.04
SMARCD1-202ENST00000394963 STK26Q9P289 416 aa21.53■■□□□ 1.04
SMARCD1-202ENST00000394963 ARID4BQ4LE39 1312 aaPredicted RBP21.53■■□□□ 1.04
SMARCD1-202ENST00000394963 SCAPERQ9BY12 1400 aa21.52■■□□□ 1.04
SMARCD1-202ENST00000394963 KIF14Q15058 1648 aa21.52■■□□□ 1.03
SMARCD1-202ENST00000394963 AKNAQ7Z591 1439 aa21.52■■□□□ 1.03
SMARCD1-202ENST00000394963 KDM6BO15054 1643 aa21.51■■□□□ 1.03
SMARCD1-202ENST00000394963 CCER2I3L3R5 266 aa21.51■■□□□ 1.03
SMARCD1-202ENST00000394963 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
SMARCD1-202ENST00000394963 WASHC2CQ9Y4E1 1318 aa21.49■■□□□ 1.03
SMARCD1-202ENST00000394963 ERCC6L2Q5T890 1561 aa21.47■■□□□ 1.03
SMARCD1-202ENST00000394963 CCDC7Q96M83 1385 aa21.47■■□□□ 1.03
SMARCD1-202ENST00000394963 KIAA1107Q9UPP5 1409 aa21.47■■□□□ 1.03
SMARCD1-202ENST00000394963 FAM69CQ0P6D2 419 aa21.46■■□□□ 1.03
SMARCD1-202ENST00000394963 ROCK1Q13464 1354 aa21.45■■□□□ 1.03
SMARCD1-202ENST00000394963 TRAK1Q9UPV9 953 aa21.45■■□□□ 1.02
SMARCD1-202ENST00000394963 KANK1Q14678 1352 aa21.44■■□□□ 1.02
SMARCD1-202ENST00000394963 PLEKHG5O94827 1062 aa21.43■■□□□ 1.02
SMARCD1-202ENST00000394963 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
SMARCD1-202ENST00000394963 LRRIQ1Q96JM4 1722 aa21.43■■□□□ 1.02
SMARCD1-202ENST00000394963 PLEKHH2Q8IVE3 1493 aa21.42■■□□□ 1.02
SMARCD1-202ENST00000394963 TMF1P82094 1093 aa21.42■■□□□ 1.02
SMARCD1-202ENST00000394963 NEUROD2Q15784 382 aa21.42■■□□□ 1.02
SMARCD1-202ENST00000394963 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
SMARCD1-202ENST00000394963 PANK3Q9H999 370 aa21.4■■□□□ 1.02
SMARCD1-202ENST00000394963 TCOF1Q13428 1488 aaKnown RBP21.38■■□□□ 1.01
SMARCD1-202ENST00000394963 B4GALNT3Q6L9W6 998 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms