RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 CDK11BP21127 795 aaKnown RBP21.92■■□□□ 1.1
SIN3A-203ENST00000394949 PDE3BQ13370 1112 aa21.92■■□□□ 1.1
SIN3A-203ENST00000394949 KANK1Q14678 1352 aa21.91■■□□□ 1.1
SIN3A-203ENST00000394949 NRDCO43847 1150 aa21.91■■□□□ 1.1
SIN3A-203ENST00000394949 PLCB2Q00722 1185 aa21.89■■□□□ 1.1
SIN3A-203ENST00000394949 DCAF11Q8TEB1 546 aa21.89■■□□□ 1.1
SIN3A-203ENST00000394949 HDGFP51858 240 aaKnown RBP21.88■■□□□ 1.09
SIN3A-203ENST00000394949 GOLGA6L3A6NEY3 463 aa21.87■■□□□ 1.09
SIN3A-203ENST00000394949 CCDC88BA6NC98 1476 aa21.87■■□□□ 1.09
SIN3A-203ENST00000394949 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
SIN3A-203ENST00000394949 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
SIN3A-203ENST00000394949 RWDD1Q9H446 243 aaPredicted RBP21.84■■□□□ 1.09
SIN3A-203ENST00000394949 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.83■■□□□ 1.09
SIN3A-203ENST00000394949 FMN1Q68DA7 1419 aa21.82■■□□□ 1.08
SIN3A-203ENST00000394949 ROCK2O75116 1388 aaKnown RBP21.82■■□□□ 1.08
SIN3A-203ENST00000394949 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
SIN3A-203ENST00000394949 MCCP23508 829 aa21.82■■□□□ 1.08
SIN3A-203ENST00000394949 SLKQ9H2G2 1235 aaPredicted RBP21.81■■□□□ 1.08
SIN3A-203ENST00000394949 LMOD2Q6P5Q4 547 aa21.81■■□□□ 1.08
SIN3A-203ENST00000394949 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
SIN3A-203ENST00000394949 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
SIN3A-203ENST00000394949 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
SIN3A-203ENST00000394949 SPRYD3Q8NCJ5 442 aa21.79■■□□□ 1.08
SIN3A-203ENST00000394949 CARMIL2Q6F5E8 1435 aa21.79■■□□□ 1.08
SIN3A-203ENST00000394949 IPO8O15397 1037 aaKnown RBP21.78■■□□□ 1.08
SIN3A-203ENST00000394949 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
SIN3A-203ENST00000394949 GOLGA6L4A6NEF3 574 aa21.77■■□□□ 1.08
SIN3A-203ENST00000394949 KIAA2012Q0VF49 1180 aa21.77■■□□□ 1.08
SIN3A-203ENST00000394949 TPRNQ4KMQ1 711 aa21.77■■□□□ 1.08
SIN3A-203ENST00000394949 PDS5BQ9NTI5 1447 aa21.77■■□□□ 1.08
SIN3A-203ENST00000394949 NLRP13Q86W25 1043 aa21.76■■□□□ 1.07
SIN3A-203ENST00000394949 ZBED9Q6R2W3 1325 aa21.76■■□□□ 1.07
SIN3A-203ENST00000394949 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
SIN3A-203ENST00000394949 GSE1Q14687 1217 aa21.75■■□□□ 1.07
SIN3A-203ENST00000394949 GZF1Q9H116 711 aaPredicted RBP21.75■■□□□ 1.07
SIN3A-203ENST00000394949 MROH2BQ7Z745 1585 aa21.75■■□□□ 1.07
SIN3A-203ENST00000394949 PKD2Q13563 968 aa21.74■■□□□ 1.07
SIN3A-203ENST00000394949 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
SIN3A-203ENST00000394949 PDE4AP27815 886 aa21.72■■□□□ 1.07
SIN3A-203ENST00000394949 SYAP1Q96A49 352 aaPredicted RBP21.72■■□□□ 1.07
SIN3A-203ENST00000394949 SMARCA2P51531 1590 aa21.71■■□□□ 1.07
SIN3A-203ENST00000394949 SRPK2P78362 688 aaKnown RBP21.71■■□□□ 1.07
SIN3A-203ENST00000394949 GOLGA2Q08379 1002 aa21.71■■□□□ 1.07
SIN3A-203ENST00000394949 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
SIN3A-203ENST00000394949 L3MBTL2Q969R5 705 aa21.69■■□□□ 1.06
SIN3A-203ENST00000394949 GGT6Q6P531 493 aa21.68■■□□□ 1.06
SIN3A-203ENST00000394949 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
SIN3A-203ENST00000394949 KCNJ4P48050 445 aa21.67■■□□□ 1.06
SIN3A-203ENST00000394949 HSP90AA2PQ14568 343 aaPredicted RBP21.67■■□□□ 1.06
SIN3A-203ENST00000394949 MLECQ14165 292 aa21.66■■□□□ 1.06
SIN3A-203ENST00000394949 FAM161AQ3B820 660 aa21.66■■□□□ 1.06
SIN3A-203ENST00000394949 DDX11L8A8MPP1 907 aa21.66■■□□□ 1.06
SIN3A-203ENST00000394949 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
SIN3A-203ENST00000394949 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
SIN3A-203ENST00000394949 KIF15Q9NS87 1388 aa21.65■■□□□ 1.06
SIN3A-203ENST00000394949 FGD1P98174 961 aa21.65■■□□□ 1.06
SIN3A-203ENST00000394949 DRC7Q8IY82 874 aa21.64■■□□□ 1.06
SIN3A-203ENST00000394949 FOXD1Q16676 465 aa21.63■■□□□ 1.05
SIN3A-203ENST00000394949 OS9Q13438 667 aaPredicted RBP21.63■■□□□ 1.05
SIN3A-203ENST00000394949 MYBBP1AQ9BQG0 1328 aaKnown RBP21.63■■□□□ 1.05
SIN3A-203ENST00000394949 CALD1Q05682 793 aaKnown RBP21.62■■□□□ 1.05
SIN3A-203ENST00000394949 ANKRD30AQ9BXX3 1397 aa21.62■■□□□ 1.05
SIN3A-203ENST00000394949 RRP1P56182 461 aaKnown RBP21.61■■□□□ 1.05
SIN3A-203ENST00000394949 MFAP1P55081 439 aaKnown RBP21.61■■□□□ 1.05
SIN3A-203ENST00000394949 NUP155O75694 1391 aa21.61■■□□□ 1.05
SIN3A-203ENST00000394949 HDGFL2Q7Z4V5 671 aaPredicted RBP21.6■■□□□ 1.05
SIN3A-203ENST00000394949 TRHP20396 242 aaPredicted RBP21.59■■□□□ 1.05
SIN3A-203ENST00000394949 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
SIN3A-203ENST00000394949 CENPJQ9HC77 1338 aaPredicted RBP21.58■■□□□ 1.04
SIN3A-203ENST00000394949 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.04
SIN3A-203ENST00000394949 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.04
SIN3A-203ENST00000394949 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
SIN3A-203ENST00000394949 SKOR2Q2VWA4 1001 aaPredicted RBP21.56■■□□□ 1.04
SIN3A-203ENST00000394949 HTATSF1O43719 755 aaKnown RBP21.54■■□□□ 1.04
SIN3A-203ENST00000394949 STK26Q9P289 416 aa21.53■■□□□ 1.04
SIN3A-203ENST00000394949 NPHP1O15259 732 aa21.53■■□□□ 1.04
SIN3A-203ENST00000394949 RTF1Q92541 710 aaKnown RBP21.53■■□□□ 1.04
SIN3A-203ENST00000394949 EIF3AQ14152 1382 aaKnown RBP21.53■■□□□ 1.04
SIN3A-203ENST00000394949 CADPSQ9ULU8 1353 aa21.53■■□□□ 1.04
SIN3A-203ENST00000394949 SOX12O15370 315 aa21.53■■□□□ 1.04
SIN3A-203ENST00000394949 KIAA1211Q6ZU35 1233 aa21.53■■□□□ 1.04
SIN3A-203ENST00000394949 EXOC6Q8TAG9 804 aa21.53■■□□□ 1.04
SIN3A-203ENST00000394949 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.04
SIN3A-203ENST00000394949 U2AF1L5P0DN76 240 aaPredicted RBP21.52■■□□□ 1.04
SIN3A-203ENST00000394949 U2AF1Q01081 240 aaKnown RBP eCLIP21.52■■□□□ 1.04
SIN3A-203ENST00000394949 PHF14O94880 888 aa21.51■■□□□ 1.03
SIN3A-203ENST00000394949 CSPP1Q1MSJ5 1256 aa21.5■■□□□ 1.03
SIN3A-203ENST00000394949 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
SIN3A-203ENST00000394949 CGNL1Q0VF96 1302 aa21.48■■□□□ 1.03
SIN3A-203ENST00000394949 KIF3BO15066 747 aa21.47■■□□□ 1.03
SIN3A-203ENST00000394949 CHMP4AQ9BY43 222 aa21.47■■□□□ 1.03
SIN3A-203ENST00000394949 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
SIN3A-203ENST00000394949 ST18O60284 1047 aa21.45■■□□□ 1.02
SIN3A-203ENST00000394949 VSIG10Q8N0Z9 540 aa21.45■■□□□ 1.02
SIN3A-203ENST00000394949 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
SIN3A-203ENST00000394949 CRBNQ96SW2 442 aa21.43■■□□□ 1.02
SIN3A-203ENST00000394949 HMMRO75330 724 aa21.43■■□□□ 1.02
SIN3A-203ENST00000394949 NGEFQ8N5V2 710 aa21.43■■□□□ 1.02
SIN3A-203ENST00000394949 ARID3AQ99856 593 aa21.42■■□□□ 1.02
SIN3A-203ENST00000394949 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms