RNA–Protein interactions for RNA: ENST00000394315.3

MRRF-208, Transcript of mitochondrial ribosome recycling factor, humanhuman

TSL 1 (best) BASIC

Gene MRRF, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRRF-208ENST00000394315 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
MRRF-208ENST00000394315 RYDENQ9NUL5 291 aaKnown RBP11.66□□□□□ -0.54
MRRF-208ENST00000394315 ZNF710Q8N1W2 664 aa11.65□□□□□ -0.55
MRRF-208ENST00000394315 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
MRRF-208ENST00000394315 RIMBP2O15034 1052 aa11.62□□□□□ -0.55
MRRF-208ENST00000394315 C2orf72A6NCS6 295 aa11.6□□□□□ -0.55
MRRF-208ENST00000394315 KIF3CO14782 793 aa11.6□□□□□ -0.55
MRRF-208ENST00000394315 EMP3P54852 163 aa11.6□□□□□ -0.55
MRRF-208ENST00000394315 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
MRRF-208ENST00000394315 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
MRRF-208ENST00000394315 CDAN1Q8IWY9 1227 aa11.57□□□□□ -0.56
MRRF-208ENST00000394315 ZSWIM6Q9HCJ5 1215 aa11.57□□□□□ -0.56
MRRF-208ENST00000394315 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
MRRF-208ENST00000394315 FAM205CA6NFA0 338 aa11.51□□□□□ -0.57
MRRF-208ENST00000394315 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
MRRF-208ENST00000394315 PLSCR2Q9NRY7 297 aa11.5□□□□□ -0.57
MRRF-208ENST00000394315 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
MRRF-208ENST00000394315 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
MRRF-208ENST00000394315 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
MRRF-208ENST00000394315 ERBB3P21860 1342 aa11.46□□□□□ -0.57
MRRF-208ENST00000394315 SLC34A2O95436 690 aa11.46□□□□□ -0.57
MRRF-208ENST00000394315 POTEB3A0JP26 581 aa11.45□□□□□ -0.58
MRRF-208ENST00000394315 FOXK1P85037 733 aa11.45□□□□□ -0.58
MRRF-208ENST00000394315 POTEBQ6S5H4 581 aa11.45□□□□□ -0.58
MRRF-208ENST00000394315 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
MRRF-208ENST00000394315 PLPP6Q8IY26 295 aa11.42□□□□□ -0.58
MRRF-208ENST00000394315 DSG2Q14126 1118 aa11.41□□□□□ -0.58
MRRF-208ENST00000394315 KHSRPQ92945 711 aaKnown RBP eCLIP11.4□□□□□ -0.584e-6■■■□□ 18.5
MRRF-208ENST00000394315 PDE4AP27815 886 aa11.4□□□□□ -0.59
MRRF-208ENST00000394315 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.59
MRRF-208ENST00000394315 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.59
MRRF-208ENST00000394315 PCDHGA4Q9Y5G9 962 aa11.4□□□□□ -0.59
MRRF-208ENST00000394315 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
MRRF-208ENST00000394315 NUDT7P0C024 238 aa11.36□□□□□ -0.59
MRRF-208ENST00000394315 PTCD2Q8WV60 388 aaKnown RBP11.36□□□□□ -0.59
MRRF-208ENST00000394315 NCKAP5LQ9HCH0 1330 aa11.36□□□□□ -0.59
MRRF-208ENST00000394315 ZNF316A6NFI3 1004 aaPredicted RBP11.35□□□□□ -0.59
MRRF-208ENST00000394315 TBC1D12O60347 775 aa11.34□□□□□ -0.59
MRRF-208ENST00000394315 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
MRRF-208ENST00000394315 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
MRRF-208ENST00000394315 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
MRRF-208ENST00000394315 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
MRRF-208ENST00000394315 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
MRRF-208ENST00000394315 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
MRRF-208ENST00000394315 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
MRRF-208ENST00000394315 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
MRRF-208ENST00000394315 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
MRRF-208ENST00000394315 LHX6Q9UPM6 363 aa11.3□□□□□ -0.6
MRRF-208ENST00000394315 SPNS2Q8IVW8 549 aa11.29□□□□□ -0.6
MRRF-208ENST00000394315 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
MRRF-208ENST00000394315 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
MRRF-208ENST00000394315 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
MRRF-208ENST00000394315 OXER1Q8TDS5 423 aa11.26□□□□□ -0.61
MRRF-208ENST00000394315 MFSD10Q14728 455 aa11.25□□□□□ -0.61
MRRF-208ENST00000394315 UPF1Q92900 1129 aaKnown RBP eCLIP11.25□□□□□ -0.61
MRRF-208ENST00000394315 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
MRRF-208ENST00000394315 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
MRRF-208ENST00000394315 MMRN1Q13201 1228 aa11.19□□□□□ -0.62
MRRF-208ENST00000394315 PBX2P40425 430 aa11.18□□□□□ -0.62
MRRF-208ENST00000394315 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
MRRF-208ENST00000394315 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
MRRF-208ENST00000394315 ANKRD13DQ6ZTN6 518 aa11.15□□□□□ -0.62
MRRF-208ENST00000394315 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
MRRF-208ENST00000394315 EMILIN3Q9NT22 766 aa11.14□□□□□ -0.63
MRRF-208ENST00000394315 EVI5O60447 810 aa11.14□□□□□ -0.63
MRRF-208ENST00000394315 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.632e-11■■■■□ 19.3
MRRF-208ENST00000394315 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
MRRF-208ENST00000394315 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
MRRF-208ENST00000394315 ARHGAP33O14559 1287 aa11.12□□□□□ -0.63
MRRF-208ENST00000394315 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
MRRF-208ENST00000394315 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
MRRF-208ENST00000394315 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
MRRF-208ENST00000394315 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
MRRF-208ENST00000394315 PTGER2P43116 358 aa11.07□□□□□ -0.64
MRRF-208ENST00000394315 FOSBP53539 338 aa11.06□□□□□ -0.64
MRRF-208ENST00000394315 WDR70Q9NW82 654 aa11.06□□□□□ -0.64
MRRF-208ENST00000394315 PSEN2P49810 448 aa11.04□□□□□ -0.64
MRRF-208ENST00000394315 JPH4Q96JJ6 628 aa11.04□□□□□ -0.64
MRRF-208ENST00000394315 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
MRRF-208ENST00000394315 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
MRRF-208ENST00000394315 DPYSL4O14531 572 aa11.03□□□□□ -0.64
MRRF-208ENST00000394315 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
MRRF-208ENST00000394315 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
MRRF-208ENST00000394315 E2F4Q16254 413 aa11.01□□□□□ -0.65
MRRF-208ENST00000394315 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
MRRF-208ENST00000394315 ZDHHC16Q969W1 377 aa11.01□□□□□ -0.65
MRRF-208ENST00000394315 RNF166Q96A37 237 aaPredicted RBP11.01□□□□□ -0.65
MRRF-208ENST00000394315 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
MRRF-208ENST00000394315 TK2O00142 265 aa10.99□□□□□ -0.65
MRRF-208ENST00000394315 PTPREP23469 700 aa10.99□□□□□ -0.65
MRRF-208ENST00000394315 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
MRRF-208ENST00000394315 PHF14O94880 888 aa10.96□□□□□ -0.65
MRRF-208ENST00000394315 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
MRRF-208ENST00000394315 ADAM33Q9BZ11 813 aa10.96□□□□□ -0.65
MRRF-208ENST00000394315 FBXW7Q969H0 707 aa10.95□□□□□ -0.66
MRRF-208ENST00000394315 TYW1BQ6NUM6 668 aa10.94□□□□□ -0.66
MRRF-208ENST00000394315 SPDYE16A6NNV3 312 aaPredicted RBP10.93□□□□□ -0.66
MRRF-208ENST00000394315 HRO43593 1189 aa10.93□□□□□ -0.66
MRRF-208ENST00000394315 STAC3Q96MF2 364 aa10.93□□□□□ -0.66
MRRF-208ENST00000394315 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms