RNA–Protein interactions for RNA: ENST00000393543.7

MDM1-203, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene MDM1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-203ENST00000393543 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
MDM1-203ENST00000393543 CUL7Q14999 1698 aa18.21■□□□□ 0.51
MDM1-203ENST00000393543 HECW1Q76N89 1606 aa18.21■□□□□ 0.51
MDM1-203ENST00000393543 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
MDM1-203ENST00000393543 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
MDM1-203ENST00000393543 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.5
MDM1-203ENST00000393543 IRX6P78412 446 aaPredicted RBP18.2■□□□□ 0.5
MDM1-203ENST00000393543 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
MDM1-203ENST00000393543 POLR1AO95602 1720 aaPredicted RBP18.18■□□□□ 0.5
MDM1-203ENST00000393543 ZBED9Q6R2W3 1325 aa18.17■□□□□ 0.5
MDM1-203ENST00000393543 SUPT6HQ7KZ85 1726 aaKnown RBP18.17■□□□□ 0.5
MDM1-203ENST00000393543 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
MDM1-203ENST00000393543 LRRIQ1Q96JM4 1722 aa18.16■□□□□ 0.5
MDM1-203ENST00000393543 HSPA5P11021 654 aaKnown RBP18.16■□□□□ 0.5
MDM1-203ENST00000393543 P3H3Q8IVL6 736 aa18.14■□□□□ 0.5
MDM1-203ENST00000393543 ABCA10Q8WWZ4 1543 aa18.14■□□□□ 0.49
MDM1-203ENST00000393543 ABCA5Q8WWZ7 1642 aa18.14■□□□□ 0.49
MDM1-203ENST00000393543 ATP1B4Q9UN42 357 aaPredicted RBP18.14■□□□□ 0.49
MDM1-203ENST00000393543 NCOA1Q15788 1441 aa18.13■□□□□ 0.49
MDM1-203ENST00000393543 AKNAQ7Z591 1439 aa18.13■□□□□ 0.49
MDM1-203ENST00000393543 SAMD9Q5K651 1589 aa18.13■□□□□ 0.49
MDM1-203ENST00000393543 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
MDM1-203ENST00000393543 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
MDM1-203ENST00000393543 EHBP1L1Q8N3D4 1523 aa18.12■□□□□ 0.49
MDM1-203ENST00000393543 PRKRIP1Q9H875 184 aaPredicted RBP18.1■□□□□ 0.49
MDM1-203ENST00000393543 NOP58Q9Y2X3 529 aaKnown RBP18.1■□□□□ 0.49
MDM1-203ENST00000393543 DENND4BO75064 1496 aaPredicted RBP18.1■□□□□ 0.49
MDM1-203ENST00000393543 TCOF1Q13428 1488 aaKnown RBP18.09■□□□□ 0.49
MDM1-203ENST00000393543 RTL5Q5HYW3 569 aaPredicted RBP18.09■□□□□ 0.49
MDM1-203ENST00000393543 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
MDM1-203ENST00000393543 GRIN2BQ13224 1484 aa18.09■□□□□ 0.49
MDM1-203ENST00000393543 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
MDM1-203ENST00000393543 UGGT2Q9NYU1 1516 aa18.08■□□□□ 0.49
MDM1-203ENST00000393543 PAXIP1Q6ZW49 1069 aaPredicted RBP18.08■□□□□ 0.48
MDM1-203ENST00000393543 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
MDM1-203ENST00000393543 CCDC184Q52MB2 194 aa18.07■□□□□ 0.48
MDM1-203ENST00000393543 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
MDM1-203ENST00000393543 EIF4G3O43432 1585 aaKnown RBP18.06■□□□□ 0.48
MDM1-203ENST00000393543 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
MDM1-203ENST00000393543 SMG6Q86US8 1419 aaKnown RBP18.05■□□□□ 0.48
MDM1-203ENST00000393543 CHD1O14646 1710 aa18.05■□□□□ 0.48
MDM1-203ENST00000393543 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
MDM1-203ENST00000393543 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
MDM1-203ENST00000393543 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
MDM1-203ENST00000393543 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
MDM1-203ENST00000393543 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.48
MDM1-203ENST00000393543 WASHC2CQ9Y4E1 1318 aa18.02■□□□□ 0.48
MDM1-203ENST00000393543 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
MDM1-203ENST00000393543 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
MDM1-203ENST00000393543 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
MDM1-203ENST00000393543 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
MDM1-203ENST00000393543 RSPH4AQ5TD94 716 aa17.98■□□□□ 0.47
MDM1-203ENST00000393543 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
MDM1-203ENST00000393543 RAD54L2Q9Y4B4 1467 aa17.98■□□□□ 0.47
MDM1-203ENST00000393543 KDM6BO15054 1643 aa17.98■□□□□ 0.47
MDM1-203ENST00000393543 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
MDM1-203ENST00000393543 RPRD2Q5VT52 1461 aaKnown RBP17.96■□□□□ 0.47
MDM1-203ENST00000393543 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
MDM1-203ENST00000393543 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
MDM1-203ENST00000393543 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
MDM1-203ENST00000393543 CHMP4AQ9BY43 222 aa17.95■□□□□ 0.46
MDM1-203ENST00000393543 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
MDM1-203ENST00000393543 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
MDM1-203ENST00000393543 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
MDM1-203ENST00000393543 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
MDM1-203ENST00000393543 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
MDM1-203ENST00000393543 MPHOSPH9Q99550 1183 aa17.93■□□□□ 0.46
MDM1-203ENST00000393543 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
MDM1-203ENST00000393543 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
MDM1-203ENST00000393543 KIF7Q2M1P5 1343 aa17.91■□□□□ 0.46
MDM1-203ENST00000393543 HSP90AA2PQ14568 343 aaPredicted RBP17.91■□□□□ 0.46
MDM1-203ENST00000393543 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
MDM1-203ENST00000393543 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
MDM1-203ENST00000393543 RRP9O43818 475 aaKnown RBP17.88■□□□□ 0.45
MDM1-203ENST00000393543 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
MDM1-203ENST00000393543 DHX29Q7Z478 1369 aaKnown RBP17.87■□□□□ 0.45
MDM1-203ENST00000393543 BRD2P25440 801 aaKnown RBP17.87■□□□□ 0.45
MDM1-203ENST00000393543 ZBTB47Q9UFB7 747 aaPredicted RBP17.86■□□□□ 0.45
MDM1-203ENST00000393543 NBPF8Q3BBV2 869 aa17.86■□□□□ 0.45
MDM1-203ENST00000393543 PRDM4Q9UKN5 801 aa17.85■□□□□ 0.45
MDM1-203ENST00000393543 NAP1L5Q96NT1 182 aaPredicted RBP17.84■□□□□ 0.45
MDM1-203ENST00000393543 CHMP4BQ9H444 224 aaKnown RBP17.84■□□□□ 0.45
MDM1-203ENST00000393543 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.45
MDM1-203ENST00000393543 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.44
MDM1-203ENST00000393543 BBXQ8WY36 941 aaPredicted RBP17.82■□□□□ 0.44
MDM1-203ENST00000393543 CHIC2Q9UKJ5 165 aa17.82■□□□□ 0.44
MDM1-203ENST00000393543 DNMT1P26358 1616 aaKnown RBP17.81■□□□□ 0.44
MDM1-203ENST00000393543 MBD5Q9P267 1494 aa17.81■□□□□ 0.44
MDM1-203ENST00000393543 BCORL1Q5H9F3 1711 aa17.8■□□□□ 0.44
MDM1-203ENST00000393543 EPRSP07814 1512 aaKnown RBP17.8■□□□□ 0.44
MDM1-203ENST00000393543 TULP1O00294 542 aaPredicted RBP17.78■□□□□ 0.44
MDM1-203ENST00000393543 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
MDM1-203ENST00000393543 MAGI1Q96QZ7 1491 aaPredicted RBP17.78■□□□□ 0.44
MDM1-203ENST00000393543 KIF14Q15058 1648 aa17.78■□□□□ 0.44
MDM1-203ENST00000393543 GTF2E1P29083 439 aaPredicted RBP17.78■□□□□ 0.44
MDM1-203ENST00000393543 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
MDM1-203ENST00000393543 HOMEZQ8IX15 550 aa17.78■□□□□ 0.44
MDM1-203ENST00000393543 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
MDM1-203ENST00000393543 DAPK1P53355 1430 aa17.77■□□□□ 0.43
MDM1-203ENST00000393543 KDM5CP41229 1560 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms