RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
MDM2-208ENST00000393410 C2orf72A6NCS6 295 aa8.91□□□□□ -0.98
MDM2-208ENST00000393410 NCKAP5LQ9HCH0 1330 aa8.87□□□□□ -0.99
MDM2-208ENST00000393410 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
MDM2-208ENST00000393410 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
MDM2-208ENST00000393410 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
MDM2-208ENST00000393410 CRISPLD2Q9H0B8 497 aa8.86□□□□□ -0.99
MDM2-208ENST00000393410 GPHNQ9NQX3 736 aaPredicted RBP8.86□□□□□ -0.99
MDM2-208ENST00000393410 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
MDM2-208ENST00000393410 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
MDM2-208ENST00000393410 DSG2Q14126 1118 aa8.83□□□□□ -1
MDM2-208ENST00000393410 TSHZ2Q9NRE2 1034 aa8.83□□□□□ -1
MDM2-208ENST00000393410 SNPHO15079 494 aa8.82□□□□□ -1
MDM2-208ENST00000393410 PDE4AP27815 886 aa8.81□□□□□ -1
MDM2-208ENST00000393410 FOXK1P85037 733 aa8.81□□□□□ -1
MDM2-208ENST00000393410 ST18O60284 1047 aa8.8□□□□□ -1
MDM2-208ENST00000393410 PLPP6Q8IY26 295 aa8.8□□□□□ -1
MDM2-208ENST00000393410 LARP6Q9BRS8 491 aaKnown RBP8.8□□□□□ -1
MDM2-208ENST00000393410 MFSD10Q14728 455 aa8.78□□□□□ -1
MDM2-208ENST00000393410 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
MDM2-208ENST00000393410 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
MDM2-208ENST00000393410 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
MDM2-208ENST00000393410 ZNF710Q8N1W2 664 aa8.74□□□□□ -1.01
MDM2-208ENST00000393410 SLC34A2O95436 690 aa8.73□□□□□ -1.01
MDM2-208ENST00000393410 GPR153Q6NV75 609 aa8.73□□□□□ -1.01
MDM2-208ENST00000393410 KHSRPQ92945 711 aaKnown RBP eCLIP8.73□□□□□ -1.012e-9■■■□□ 16.5
MDM2-208ENST00000393410 ARSIQ5FYB1 569 aa8.72□□□□□ -1.01
MDM2-208ENST00000393410 MARVELD3Q96A59 401 aa8.72□□□□□ -1.01
MDM2-208ENST00000393410 HOXB1P14653 301 aaPredicted RBP8.71□□□□□ -1.02
MDM2-208ENST00000393410 ZSWIM6Q9HCJ5 1215 aa8.71□□□□□ -1.02
MDM2-208ENST00000393410 RIMBP2O15034 1052 aa8.7□□□□□ -1.02
MDM2-208ENST00000393410 PTCD2Q8WV60 388 aaKnown RBP8.7□□□□□ -1.02
MDM2-208ENST00000393410 PCDHGA4Q9Y5G9 962 aa8.7□□□□□ -1.02
MDM2-208ENST00000393410 HAP1P54257 671 aaPredicted RBP8.69□□□□□ -1.02
MDM2-208ENST00000393410 OXER1Q8TDS5 423 aa8.69□□□□□ -1.02
MDM2-208ENST00000393410 EMILIN3Q9NT22 766 aa8.69□□□□□ -1.02
MDM2-208ENST00000393410 POTEMA6NI47 508 aa8.68□□□□□ -1.02
MDM2-208ENST00000393410 POTEGQ6S5H5 508 aa8.68□□□□□ -1.02
MDM2-208ENST00000393410 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
MDM2-208ENST00000393410 CAMK2BQ13554 666 aa8.67□□□□□ -1.02
MDM2-208ENST00000393410 PLSCR2Q9NRY7 297 aa8.67□□□□□ -1.02
MDM2-208ENST00000393410 EMP3P54852 163 aa8.66□□□□□ -1.02
MDM2-208ENST00000393410 KDM4FA0A1W2PPD8 638 aa8.65□□□□□ -1.02
MDM2-208ENST00000393410 POTEB3A0JP26 581 aa8.65□□□□□ -1.02
MDM2-208ENST00000393410 NUDT7P0C024 238 aa8.65□□□□□ -1.02
MDM2-208ENST00000393410 POTEBQ6S5H4 581 aa8.65□□□□□ -1.02
MDM2-208ENST00000393410 FAM205CA6NFA0 338 aa8.63□□□□□ -1.03
MDM2-208ENST00000393410 WDR70Q9NW82 654 aa8.63□□□□□ -1.03
MDM2-208ENST00000393410 KDM2AQ9Y2K7 1162 aa8.63□□□□□ -1.03
MDM2-208ENST00000393410 E2F4Q16254 413 aa8.62□□□□□ -1.03
MDM2-208ENST00000393410 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
MDM2-208ENST00000393410 DPYSL4O14531 572 aa8.6□□□□□ -1.03
MDM2-208ENST00000393410 TBC1D12O60347 775 aa8.6□□□□□ -1.03
MDM2-208ENST00000393410 HS3ST6Q96QI5 342 aa8.6□□□□□ -1.03
MDM2-208ENST00000393410 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
MDM2-208ENST00000393410 ERBB3P21860 1342 aa8.59□□□□□ -1.03
MDM2-208ENST00000393410 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
MDM2-208ENST00000393410 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
MDM2-208ENST00000393410 EVI5O60447 810 aa8.57□□□□□ -1.04
MDM2-208ENST00000393410 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
MDM2-208ENST00000393410 ANO8Q9HCE9 1232 aaPredicted RBP8.56□□□□□ -1.04
MDM2-208ENST00000393410 ARIH1Q9Y4X5 557 aaPredicted RBP8.55□□□□□ -1.04
MDM2-208ENST00000393410 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
MDM2-208ENST00000393410 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
MDM2-208ENST00000393410 PDIA6Q15084 440 aa8.51□□□□□ -1.05
MDM2-208ENST00000393410 POTEEQ6S8J3 1075 aa8.5□□□□□ -1.05
MDM2-208ENST00000393410 ZNF687Q8N1G0 1237 aa8.5□□□□□ -1.05
MDM2-208ENST00000393410 FOSBP53539 338 aa8.49□□□□□ -1.05
MDM2-208ENST00000393410 ARHGEF1Q92888 912 aaKnown RBP8.49□□□□□ -1.05
MDM2-208ENST00000393410 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
MDM2-208ENST00000393410 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
MDM2-208ENST00000393410 ZNF454Q8N9F8 522 aa8.48□□□□□ -1.05
MDM2-208ENST00000393410 PSDA5PKW4 1024 aaPredicted RBP8.47□□□□□ -1.05
MDM2-208ENST00000393410 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
MDM2-208ENST00000393410 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
MDM2-208ENST00000393410 PCDHGA10Q9Y5H3 936 aa8.47□□□□□ -1.05
MDM2-208ENST00000393410 PTGER2P43116 358 aa8.46□□□□□ -1.06
MDM2-208ENST00000393410 PPP4R3BQ5MIZ7 849 aa8.46□□□□□ -1.06
MDM2-208ENST00000393410 P3H3Q8IVL6 736 aa8.46□□□□□ -1.06
MDM2-208ENST00000393410 DDX12PQ92771 950 aa8.46□□□□□ -1.06
MDM2-208ENST00000393410 PCDH10Q9P2E7 1040 aa8.46□□□□□ -1.06
MDM2-208ENST00000393410 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
MDM2-208ENST00000393410 PHF14O94880 888 aa8.43□□□□□ -1.06
MDM2-208ENST00000393410 ZDHHC16Q969W1 377 aa8.43□□□□□ -1.06
MDM2-208ENST00000393410 ADAM33Q9BZ11 813 aa8.43□□□□□ -1.06
MDM2-208ENST00000393410 PRIM1P49642 420 aaKnown RBP8.42□□□□□ -1.06
MDM2-208ENST00000393410 MLLT3P42568 568 aaPredicted RBP8.41□□□□□ -1.06
MDM2-208ENST00000393410 PSEN2P49810 448 aa8.41□□□□□ -1.06
MDM2-208ENST00000393410 TYW1BQ6NUM6 668 aa8.41□□□□□ -1.06
MDM2-208ENST00000393410 GRXCR2A6NFK2 248 aa8.4□□□□□ -1.06
MDM2-208ENST00000393410 ARHGAP33O14559 1287 aa8.4□□□□□ -1.06
MDM2-208ENST00000393410 SEMA3EO15041 775 aa8.4□□□□□ -1.06
MDM2-208ENST00000393410 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
MDM2-208ENST00000393410 PBX2P40425 430 aa8.39□□□□□ -1.07
MDM2-208ENST00000393410 NBR1Q14596 966 aa8.39□□□□□ -1.07
MDM2-208ENST00000393410 DMRTA1Q5VZB9 504 aa8.39□□□□□ -1.07
MDM2-208ENST00000393410 EPAS1Q99814 870 aa8.39□□□□□ -1.07
MDM2-208ENST00000393410 OSBPP22059 807 aa8.38□□□□□ -1.07
MDM2-208ENST00000393410 FBXW7Q969H0 707 aa8.38□□□□□ -1.07
MDM2-208ENST00000393410 KCNK17Q96T54 332 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms